RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 FAM114A1Q8IWE2 563 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 CCDC24Q8N4L8 307 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 SPATA5Q8NB90 893 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 TAF4BQ92750 862 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 FAM227BQ96M60 508 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 MED15Q96RN5 788 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 ZC3H12CQ9C0D7 883 aaKnown RBP4.33□□□□□ -1.72
RGPD4-201ENST00000408999 NDUFB9Q9Y6M9 179 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 DIP2CQ9Y2E4 1556 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 SETBP1Q9Y6X0 1596 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 NKRFO15226 690 aaKnown RBP eCLIP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 ZSCAN12O43309 604 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 GIGYF1O75420 1035 aaPredicted RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 ADCY5O95622 1261 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 CPA1P15085 419 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 GSPT1P15170 499 aaKnown RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 SSR1P43307 286 aaKnown RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 AFMP43652 599 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 MTIF2P46199 727 aaKnown RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 LRSAM1Q6UWE0 723 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 SMARCC2Q8TAQ2 1214 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 CPLX3Q8WVH0 158 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 LRRC27Q9C0I9 530 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 RMND1Q9NWS8 449 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 SNX14Q9Y5W7 946 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 TP53BP1Q12888 1972 aaPredicted RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 IGSF1Q8N6C5 1336 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 SPDYE4A6NLX3 237 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 TBCAO75347 108 aaKnown RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 WDHD1O75717 1129 aaPredicted RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 PPP1R37O75864 691 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 YEATS4O95619 227 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 POTEJP0CG39 1038 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 GNAQP50148 359 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 CCDC40Q4G0X9 1142 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 RRAGBQ5VZM2 374 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 TRMT1LQ7Z2T5 733 aaKnown RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 CCDC150Q8NCX0 1101 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 MRPS27Q92552 414 aaKnown RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 MPHOSPH6Q99547 160 aaKnown RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 C6orf50Q9HD87 102 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 TULP4Q9NRJ4 1543 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 NWD2Q9ULI1 1742 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 BMP15O95972 392 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 PARP1P09874 1014 aaKnown RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 DESP17661 470 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 TRIM21P19474 475 aaKnown RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 CTDSPL2Q05D32 466 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 RAB3GAP1Q15042 981 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 ENOX2Q16206 610 aaKnown RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 ANO6Q4KMQ2 910 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 ZSCAN30Q86W11 494 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 ERMNQ8TAM6 284 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 BCL2L12Q9HB09 334 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 FBXO3Q9UK99 471 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 ATP10DQ9P241 1426 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 MARF1Q9Y4F3 1742 aaKnown RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 B4E1Z4 1266 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 KIF5CO60282 957 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 MCM7P33993 719 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 UBA7P41226 1012 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 FAM193AP78312 1265 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 MTERF4Q7Z6M4 381 aaKnown RBP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 TEX11Q8IYF3 940 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 LPIN2Q92539 896 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 FAXDC2Q96IV6 333 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 CARD10Q9BWT7 1032 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 LRRC4CQ9HCJ2 640 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 AATFQ9NY61 560 aaKnown RBP eCLIP4.32□□□□□ -1.72
RGPD4-201ENST00000408999 GOLGA6L10A6NI86 522 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 APBA3O96018 575 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 IDEP14735 1019 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 STXBP4Q6ZWJ1 553 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 SYCP3Q8IZU3 236 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 JDP2Q8WYK2 163 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 KIAA1210Q9ULL0 1709 aa4.32□□□□□ -1.72
RGPD4-201ENST00000408999 ECM29Q5VYK3 1845 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 SIGLEC1Q9BZZ2 1709 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 ERLIN1O75477 346 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 SLC20A2Q08357 652 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 PLS1Q14651 629 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 UVSSAQ2YD98 709 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 AXDND1Q5T1B0 1012 aaPredicted RBP4.31□□□□□ -1.72
RGPD4-201ENST00000408999 UTP14CQ5TAP6 766 aaKnown RBP4.31□□□□□ -1.72
RGPD4-201ENST00000408999 DHX58Q96C10 678 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 BICD1Q96G01 975 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 SGSM3Q96HU1 749 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 MMRN2Q9H8L6 949 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 MROH1Q8NDA8 1641 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 GPAA1O43292 621 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 ZAP70P43403 619 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 TCIRG1Q13488 830 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 PTPN14Q15678 1187 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 BEND3Q5T5X7 828 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 DPP8Q6V1X1 898 aaPredicted RBP4.31□□□□□ -1.72
RGPD4-201ENST00000408999 TTLL7Q6ZT98 887 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 TRIM47Q96LD4 638 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 DNAI2Q9GZS0 605 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 SALL3Q9BXA9 1300 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms