RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ELP3Q9H9T3 547 aa12.83□□□□□ -0.36
RPAIN-204ENST00000405578 ECHDC1Q9NTX5 307 aa12.83□□□□□ -0.36
RPAIN-204ENST00000405578 TLR7Q9NYK1 1049 aaKnown RBP12.83□□□□□ -0.36
RPAIN-204ENST00000405578 SUGT1Q9Y2Z0 365 aa12.83□□□□□ -0.36
RPAIN-204ENST00000405578 PCDHAC2Q9Y5I4 1007 aa12.83□□□□□ -0.36
RPAIN-204ENST00000405578 PDS5AQ29RF7 1337 aaKnown RBP12.83□□□□□ -0.36
RPAIN-204ENST00000405578 MX1P20591 662 aa12.82□□□□□ -0.36
RPAIN-204ENST00000405578 HOXD11P31277 338 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-204ENST00000405578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.82□□□□□ -0.36
RPAIN-204ENST00000405578 BRI3BPQ8WY22 251 aa12.82□□□□□ -0.36
RPAIN-204ENST00000405578 OPTNQ96CV9 577 aa12.82□□□□□ -0.36
RPAIN-204ENST00000405578 ARHGAP39Q9C0H5 1083 aa12.82□□□□□ -0.36
RPAIN-204ENST00000405578 PRO3102Q9H379 93 aa12.82□□□□□ -0.36
RPAIN-204ENST00000405578 VEZTQ9HBM0 779 aa12.82□□□□□ -0.36
RPAIN-204ENST00000405578 ZFYVE28Q9HCC9 887 aa12.82□□□□□ -0.36
RPAIN-204ENST00000405578 JAG2Q9Y219 1238 aa12.82□□□□□ -0.36
RPAIN-204ENST00000405578 TTC41PQ6P2S7 1318 aa12.82□□□□□ -0.36
RPAIN-204ENST00000405578 ALPK3Q96L96 1907 aa12.82□□□□□ -0.36
RPAIN-204ENST00000405578 USP2O75604 605 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-204ENST00000405578 ATP5JP18859 108 aa12.81□□□□□ -0.36
RPAIN-204ENST00000405578 MS4A4AQ96JQ5 239 aa12.81□□□□□ -0.36
RPAIN-204ENST00000405578 HMG20BQ9P0W2 317 aa12.81□□□□□ -0.36
RPAIN-204ENST00000405578 ABCF2Q9UG63 623 aa12.81□□□□□ -0.36
RPAIN-204ENST00000405578 MAST3O60307 1309 aa12.81□□□□□ -0.36
RPAIN-204ENST00000405578 AOX1Q06278 1338 aa12.81□□□□□ -0.36
RPAIN-204ENST00000405578 MGAMO43451 1857 aa12.8□□□□□ -0.36
RPAIN-204ENST00000405578 CCL15-CCL14A0A0B4J2E2 113 aa12.8□□□□□ -0.36
RPAIN-204ENST00000405578 SOX1O00570 391 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-204ENST00000405578 MYO1BO43795 1136 aa12.8□□□□□ -0.36
RPAIN-204ENST00000405578 IGSF3O75054 1194 aa12.8□□□□□ -0.36
RPAIN-204ENST00000405578 GLRX3O76003 335 aaKnown RBP12.8□□□□□ -0.36
RPAIN-204ENST00000405578 LDHBP07195 334 aaKnown RBP12.8□□□□□ -0.36
RPAIN-204ENST00000405578 MCAMP43121 646 aa12.8□□□□□ -0.36
RPAIN-204ENST00000405578 TTF1Q15361 905 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-204ENST00000405578 MTFR1Q15390 333 aa12.8□□□□□ -0.36
RPAIN-204ENST00000405578 CCL15Q16663 113 aa12.8□□□□□ -0.36
RPAIN-204ENST00000405578 SLF2Q8IX21 1173 aa12.8□□□□□ -0.36
RPAIN-204ENST00000405578 LRP2BPQ9P2M1 347 aa12.8□□□□□ -0.36
RPAIN-204ENST00000405578 SALL1Q9NSC2 1324 aa12.8□□□□□ -0.36
RPAIN-204ENST00000405578 F8W031 263 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-204ENST00000405578 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-204ENST00000405578 MNX1P50219 401 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-204ENST00000405578 KIF22Q14807 665 aa12.79□□□□□ -0.36
RPAIN-204ENST00000405578 CFAP100Q494V2 611 aa12.79□□□□□ -0.36
RPAIN-204ENST00000405578 ERICH6Q7L0X2 663 aa12.79□□□□□ -0.36
RPAIN-204ENST00000405578 DZIP1Q86YF9 867 aaKnown RBP12.79□□□□□ -0.36
RPAIN-204ENST00000405578 FAM43AQ8N2R8 423 aa12.79□□□□□ -0.36
RPAIN-204ENST00000405578 CERS5Q8N5B7 392 aa12.79□□□□□ -0.36
RPAIN-204ENST00000405578 MTMR14Q8NCE2 650 aa12.79□□□□□ -0.36
RPAIN-204ENST00000405578 LRCH3Q96II8 777 aa12.79□□□□□ -0.36
RPAIN-204ENST00000405578 DNAJC2Q99543 621 aaKnown RBP12.79□□□□□ -0.36
RPAIN-204ENST00000405578 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
RPAIN-204ENST00000405578 SNRKQ9NRH2 765 aa12.79□□□□□ -0.36
RPAIN-204ENST00000405578 TTF2Q9UNY4 1162 aaKnown RBP12.79□□□□□ -0.36
RPAIN-204ENST00000405578 SPDYE2BA6NHP3 402 aa12.78□□□□□ -0.36
RPAIN-204ENST00000405578 SPDYE6P0CI01 402 aa12.78□□□□□ -0.36
RPAIN-204ENST00000405578 ZAP70P43403 619 aa12.78□□□□□ -0.36
RPAIN-204ENST00000405578 PDE1AP54750 535 aa12.78□□□□□ -0.36
RPAIN-204ENST00000405578 GSTO1P78417 241 aa12.78□□□□□ -0.36
RPAIN-204ENST00000405578 LACTBP83111 547 aaPredicted RBP12.78□□□□□ -0.36
RPAIN-204ENST00000405578 RASA3Q14644 834 aa12.78□□□□□ -0.36
RPAIN-204ENST00000405578 LRRFIP1Q32MZ4 808 aaKnown RBP12.78□□□□□ -0.36
RPAIN-204ENST00000405578 TMED8Q6PL24 325 aaPredicted RBP12.78□□□□□ -0.36
RPAIN-204ENST00000405578 PRMT6Q96LA8 375 aaPredicted RBP12.78□□□□□ -0.36
RPAIN-204ENST00000405578 HAUS7Q99871 368 aa12.78□□□□□ -0.36
RPAIN-204ENST00000405578 HTATIP2Q9BUP3 242 aa12.78□□□□□ -0.36
RPAIN-204ENST00000405578 RAI14Q9P0K7 980 aa12.78□□□□□ -0.36
RPAIN-204ENST00000405578 STAP2Q9UGK3 403 aa12.78□□□□□ -0.36
RPAIN-204ENST00000405578 GOLIM4O00461 696 aa12.77□□□□□ -0.37
RPAIN-204ENST00000405578 GTF2A2P52657 109 aa12.77□□□□□ -0.37
RPAIN-204ENST00000405578 RBM5P52756 815 aaKnown RBP eCLIP12.77□□□□□ -0.37
RPAIN-204ENST00000405578 HDLBPQ00341 1268 aaKnown RBP12.77□□□□□ -0.37
RPAIN-204ENST00000405578 MAP3K12Q12852 859 aa12.77□□□□□ -0.37
RPAIN-204ENST00000405578 PI16Q6UXB8 463 aa12.77□□□□□ -0.37
RPAIN-204ENST00000405578 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.77□□□□□ -0.37
RPAIN-204ENST00000405578 OTUD7AQ8TE49 926 aaPredicted RBP12.77□□□□□ -0.37
RPAIN-204ENST00000405578 MRIQ9BWK5 157 aa12.77□□□□□ -0.37
RPAIN-204ENST00000405578 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.77□□□□□ -0.37
RPAIN-204ENST00000405578 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
RPAIN-204ENST00000405578 PAG1Q9NWQ8 432 aa12.77□□□□□ -0.37
RPAIN-204ENST00000405578 SERPINA10Q9UK55 444 aa12.77□□□□□ -0.37
RPAIN-204ENST00000405578 NR2E3Q9Y5X4 410 aa12.77□□□□□ -0.37
RPAIN-204ENST00000405578 TLR2O60603 784 aa12.76□□□□□ -0.37
RPAIN-204ENST00000405578 IDH1O75874 414 aaKnown RBP12.76□□□□□ -0.37
RPAIN-204ENST00000405578 CYP2E1P05181 493 aaPredicted RBP12.76□□□□□ -0.37
RPAIN-204ENST00000405578 LDHCP07864 332 aa12.76□□□□□ -0.37
RPAIN-204ENST00000405578 PRMT2P55345 433 aa12.76□□□□□ -0.37
RPAIN-204ENST00000405578 VGLL4Q14135 290 aa12.76□□□□□ -0.37
RPAIN-204ENST00000405578 ZSCAN25Q6NSZ9 544 aa12.76□□□□□ -0.37
RPAIN-204ENST00000405578 UBE2Q1Q7Z7E8 422 aa12.76□□□□□ -0.37
RPAIN-204ENST00000405578 CDAN1Q8IWY9 1227 aa12.76□□□□□ -0.37
RPAIN-204ENST00000405578 TEKT1Q969V4 418 aa12.76□□□□□ -0.37
RPAIN-204ENST00000405578 OSBPL3Q9H4L5 887 aa12.76□□□□□ -0.37
RPAIN-204ENST00000405578 LAMA3Q16787 3333 aa12.75□□□□□ -0.37
RPAIN-204ENST00000405578 A0A1W2PPC1 479 aa12.75□□□□□ -0.37
RPAIN-204ENST00000405578 WDHD1O75717 1129 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-204ENST00000405578 PRDX5P30044 214 aa12.75□□□□□ -0.37
RPAIN-204ENST00000405578 GJA8P48165 433 aa12.75□□□□□ -0.37
RPAIN-204ENST00000405578 TSHZ3Q63HK5 1081 aa12.75□□□□□ -0.37
RPAIN-204ENST00000405578 TBC1D9Q6ZT07 1266 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms