RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 ATP2A2P16615 1042 aaKnown RBP14.96□□□□□ -0.01
SNED1-205ENST00000405547 KIAA1468Q9P260 1216 aa14.96□□□□□ -0.01
SNED1-205ENST00000405547 A0A1B0GUA9 196 aa14.96□□□□□ -0.01
SNED1-205ENST00000405547 INPP5BP32019 993 aa14.96□□□□□ -0.01
SNED1-205ENST00000405547 FAM173BQ6P4H8 233 aa14.96□□□□□ -0.01
SNED1-205ENST00000405547 NOX5Q96PH1 765 aa14.96□□□□□ -0.01
SNED1-205ENST00000405547 IQSEC3Q9UPP2 1182 aaPredicted RBP14.96□□□□□ -0.01
SNED1-205ENST00000405547 BRD3Q15059 726 aa14.96□□□□□ -0.01
SNED1-205ENST00000405547 NYXQ9GZU5 481 aa14.96□□□□□ -0.01
SNED1-205ENST00000405547 FRMD4BQ9Y2L6 1034 aa14.96□□□□□ -0.01
SNED1-205ENST00000405547 ALDH3A1P30838 453 aa14.96□□□□□ -0.02
SNED1-205ENST00000405547 ZNF804AQ7Z570 1209 aa14.96□□□□□ -0.02
SNED1-205ENST00000405547 IQCDQ96DY2 449 aa14.96□□□□□ -0.02
SNED1-205ENST00000405547 NCOA5Q9HCD5 579 aaKnown RBP14.96□□□□□ -0.02
SNED1-205ENST00000405547 TLDC2A0PJX2 215 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 ST5P78524 1137 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 B4E1Z4 1266 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 EYA2O00167 538 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 RFC4P35249 363 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 NAP1L4Q99733 375 aaKnown RBP14.95□□□□□ -0.02
SNED1-205ENST00000405547 HDAC9Q9UKV0 1011 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 DMRT2Q9Y5R5 561 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 POLR1AO95602 1720 aaPredicted RBP14.95□□□□□ -0.02
SNED1-205ENST00000405547 TRAF5O00463 557 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 TSKSQ9UJT2 592 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 NR1I2O75469 434 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 KRT9P35527 623 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 ZNF174Q15697 407 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 CHRNA2Q15822 529 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 CEP83Q9Y592 693 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 IRS4O14654 1257 aaPredicted RBP14.95□□□□□ -0.02
SNED1-205ENST00000405547 RGS12O14924 1447 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 GPAA1O43292 621 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 CSGALNACT2Q8N6G5 542 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 KIAA1524Q8TCG1 905 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 HOXC9P31274 260 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 ME3Q16798 604 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 CCDC25Q86WR0 208 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 PLBD2Q8NHP8 589 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 LRRC45Q96CN5 670 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 TIMM10P62072 90 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 MIGA1Q8NAN2 632 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 CCDC51Q96ER9 411 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 TRIM7Q9C029 511 aa14.95□□□□□ -0.02
SNED1-205ENST00000405547 EPB41P11171 864 aaKnown RBP14.94□□□□□ -0.02
SNED1-205ENST00000405547 SLC9C1Q4G0N8 1177 aa14.94□□□□□ -0.02
SNED1-205ENST00000405547 MPHOSPH6Q99547 160 aaKnown RBP14.94□□□□□ -0.02
SNED1-205ENST00000405547 NKIRAS1Q9NYS0 192 aa14.94□□□□□ -0.02
SNED1-205ENST00000405547 CEBPAP49715 358 aaPredicted RBP14.94□□□□□ -0.02
SNED1-205ENST00000405547 ATP11AP98196 1134 aa14.94□□□□□ -0.02
SNED1-205ENST00000405547 CLUL1Q15846 466 aa14.94□□□□□ -0.02
SNED1-205ENST00000405547 SEL1L2Q5TEA6 688 aa14.94□□□□□ -0.02
SNED1-205ENST00000405547 LRRC8AQ8IWT6 810 aa14.94□□□□□ -0.02
SNED1-205ENST00000405547 SMARCC2Q8TAQ2 1214 aa14.94□□□□□ -0.02
SNED1-205ENST00000405547 GSPT1P15170 499 aaKnown RBP14.94□□□□□ -0.02
SNED1-205ENST00000405547 TRMT1LQ7Z2T5 733 aaKnown RBP14.94□□□□□ -0.02
SNED1-205ENST00000405547 CCDC84Q86UT8 332 aaPredicted RBP14.94□□□□□ -0.02
SNED1-205ENST00000405547 NIP7Q9Y221 180 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNED1-205ENST00000405547 OAS2P29728 719 aaKnown RBP14.94□□□□□ -0.02
SNED1-205ENST00000405547 RBM6P78332 1123 aaKnown RBP14.94□□□□□ -0.02
SNED1-205ENST00000405547 ZNF790Q6PG37 636 aa14.94□□□□□ -0.02
SNED1-205ENST00000405547 GPT2Q8TD30 523 aa14.94□□□□□ -0.02
SNED1-205ENST00000405547 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNED1-205ENST00000405547 SHROOM2Q13796 1616 aa14.94□□□□□ -0.02
SNED1-205ENST00000405547 TMEM110-MUSTN1A8MSY1 372 aa14.94□□□□□ -0.02
SNED1-205ENST00000405547 XPO4Q9C0E2 1151 aaKnown RBP14.94□□□□□ -0.02
SNED1-205ENST00000405547 CSRNP2Q9H175 543 aa14.94□□□□□ -0.02
SNED1-205ENST00000405547 KCNK9Q9NPC2 374 aa14.94□□□□□ -0.02
SNED1-205ENST00000405547 DSCC1Q9BVC3 393 aa14.94□□□□□ -0.02
SNED1-205ENST00000405547 HPDP32754 393 aaPredicted RBP14.93□□□□□ -0.02
SNED1-205ENST00000405547 PDE4DQ08499 809 aa14.93□□□□□ -0.02
SNED1-205ENST00000405547 MTX1Q13505 466 aa14.93□□□□□ -0.02
SNED1-205ENST00000405547 SECISBP2LQ93073 1101 aaKnown RBP14.93□□□□□ -0.02
SNED1-205ENST00000405547 MBD4O95243 580 aa14.93□□□□□ -0.02
SNED1-205ENST00000405547 EEF2P13639 858 aaKnown RBP14.93□□□□□ -0.02
SNED1-205ENST00000405547 CFAP221Q4G0U5 840 aa14.93□□□□□ -0.02
SNED1-205ENST00000405547 WWC3Q9ULE0 1092 aa14.93□□□□□ -0.02
SNED1-205ENST00000405547 TNNI2P48788 182 aa14.93□□□□□ -0.02
SNED1-205ENST00000405547 PLCB3Q01970 1234 aa14.93□□□□□ -0.02
SNED1-205ENST00000405547 PUM3Q15397 648 aaKnown RBP14.93□□□□□ -0.02
SNED1-205ENST00000405547 ARHGEF10O15013 1369 aa14.93□□□□□ -0.02
SNED1-205ENST00000405547 DZIP3Q86Y13 1208 aaKnown RBP14.93□□□□□ -0.02
SNED1-205ENST00000405547 CLASP1Q7Z460 1538 aa14.93□□□□□ -0.02
SNED1-205ENST00000405547 SMIM23A6NLE4 172 aa14.92□□□□□ -0.02
SNED1-205ENST00000405547 VIMP08670 466 aaKnown RBP14.92□□□□□ -0.02
SNED1-205ENST00000405547 PAK2Q13177 524 aa14.92□□□□□ -0.02
SNED1-205ENST00000405547 DCAF17Q5H9S7 520 aaPredicted RBP14.92□□□□□ -0.02
SNED1-205ENST00000405547 ZNF274Q96GC6 653 aaPredicted RBP14.92□□□□□ -0.02
SNED1-205ENST00000405547 NUCKS1Q9H1E3 243 aaKnown RBP14.92□□□□□ -0.02
SNED1-205ENST00000405547 EFCAB8A8MWE9 144 aa14.92□□□□□ -0.02
SNED1-205ENST00000405547 PARP1P09874 1014 aaKnown RBP14.92□□□□□ -0.02
SNED1-205ENST00000405547 ATP6V1AP38606 617 aa14.92□□□□□ -0.02
SNED1-205ENST00000405547 TTC37Q6PGP7 1564 aa14.92□□□□□ -0.02
SNED1-205ENST00000405547 RAPGEF1Q13905 1077 aa14.92□□□□□ -0.02
SNED1-205ENST00000405547 INTS8Q75QN2 995 aaKnown RBP14.92□□□□□ -0.02
SNED1-205ENST00000405547 TRMT2AQ8IZ69 625 aaKnown RBP14.92□□□□□ -0.02
SNED1-205ENST00000405547 DIS3L2Q8IYB7 885 aaKnown RBP14.92□□□□□ -0.02
SNED1-205ENST00000405547 LRRC59Q96AG4 307 aaKnown RBP14.92□□□□□ -0.02
SNED1-205ENST00000405547 MRFAP1L1Q96HT8 127 aa14.92□□□□□ -0.02
SNED1-205ENST00000405547 ZKSCAN3Q9BRR0 538 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms