RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 AFDNP55196 1824 aaKnown RBP17.27■□□□□ 0.35
ATG4B-206ENST00000405546 CDKL5O76039 1030 aa17.27■□□□□ 0.35
ATG4B-206ENST00000405546 ATP6V1AP38606 617 aa17.27■□□□□ 0.35
ATG4B-206ENST00000405546 RAI14Q9P0K7 980 aa17.27■□□□□ 0.35
ATG4B-206ENST00000405546 SLC4A4Q9Y6R1 1079 aa17.27■□□□□ 0.35
ATG4B-206ENST00000405546 NUTM2BA6NNL0 878 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-206ENST00000405546 NUTM2EB1AL46 878 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-206ENST00000405546 SASH3O75995 380 aa17.26■□□□□ 0.35
ATG4B-206ENST00000405546 PFKFB1P16118 471 aa17.26■□□□□ 0.35
ATG4B-206ENST00000405546 CDC27P30260 824 aa17.26■□□□□ 0.35
ATG4B-206ENST00000405546 RBM43Q6ZSC3 357 aaKnown RBP17.26■□□□□ 0.35
ATG4B-206ENST00000405546 MFSD6Q6ZSS7 791 aa17.26■□□□□ 0.35
ATG4B-206ENST00000405546 NBPF11Q86T75 865 aa17.26■□□□□ 0.35
ATG4B-206ENST00000405546 NUTM2AQ8IVF1 878 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-206ENST00000405546 FMR1NBQ8N0W7 255 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-206ENST00000405546 SPATA5Q8NB90 893 aa17.26■□□□□ 0.35
ATG4B-206ENST00000405546 PLEKHA4Q9H4M7 779 aa17.26■□□□□ 0.35
ATG4B-206ENST00000405546 SERPINC1P01008 464 aa17.26■□□□□ 0.35
ATG4B-206ENST00000405546 H2AFXP16104 143 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-206ENST00000405546 TRIM28Q13263 835 aaKnown RBP17.26■□□□□ 0.35
ATG4B-206ENST00000405546 ATL3Q6DD88 541 aa17.26■□□□□ 0.35
ATG4B-206ENST00000405546 ENGASEQ8NFI3 743 aa17.26■□□□□ 0.35
ATG4B-206ENST00000405546 UTP14AQ9BVJ6 771 aaKnown RBP17.26■□□□□ 0.35
ATG4B-206ENST00000405546 KCNJ14Q9UNX9 436 aa17.26■□□□□ 0.35
ATG4B-206ENST00000405546 CYP19A1P11511 503 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-206ENST00000405546 ATP1A3P13637 1013 aa17.25■□□□□ 0.35
ATG4B-206ENST00000405546 KIF23Q02241 960 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-206ENST00000405546 PUM3Q15397 648 aaKnown RBP17.25■□□□□ 0.35
ATG4B-206ENST00000405546 SAFBQ15424 915 aaKnown RBP eCLIP17.25■□□□□ 0.35
ATG4B-206ENST00000405546 SLC4A8Q2Y0W8 1093 aa17.25■□□□□ 0.35
ATG4B-206ENST00000405546 APOA5Q6Q788 366 aa17.25■□□□□ 0.35
ATG4B-206ENST00000405546 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.25■□□□□ 0.35
ATG4B-206ENST00000405546 MRFAP1L1Q96HT8 127 aa17.25■□□□□ 0.35
ATG4B-206ENST00000405546 SLC4A9Q96Q91 983 aa17.25■□□□□ 0.35
ATG4B-206ENST00000405546 SCN11AQ9UI33 1791 aa17.25■□□□□ 0.35
ATG4B-206ENST00000405546 hCG_1642624A0A1W2PR95 340 aa17.25■□□□□ 0.35
ATG4B-206ENST00000405546 EVCP57679 992 aa17.25■□□□□ 0.35
ATG4B-206ENST00000405546 BRAPQ7Z569 592 aa17.25■□□□□ 0.35
ATG4B-206ENST00000405546 ZSWIM5Q9P217 1185 aa17.25■□□□□ 0.35
ATG4B-206ENST00000405546 NIP7Q9Y221 180 aaKnown RBP eCLIP17.25■□□□□ 0.35
ATG4B-206ENST00000405546 TULP2O00295 520 aa17.25■□□□□ 0.35
ATG4B-206ENST00000405546 UQCRFS1P1P0C7P4 283 aa17.25■□□□□ 0.35
ATG4B-206ENST00000405546 IGHMBP2P38935 993 aaKnown RBP17.25■□□□□ 0.35
ATG4B-206ENST00000405546 SSRP1Q08945 709 aaKnown RBP17.25■□□□□ 0.35
ATG4B-206ENST00000405546 LPIN2Q92539 896 aa17.25■□□□□ 0.35
ATG4B-206ENST00000405546 KCNQ4P56696 695 aa17.24■□□□□ 0.35
ATG4B-206ENST00000405546 IFNL3Q8IZI9 196 aa17.24■□□□□ 0.35
ATG4B-206ENST00000405546 NACAP1Q9BZK3 213 aa17.24■□□□□ 0.35
ATG4B-206ENST00000405546 PHACTR2O75167 634 aa17.24■□□□□ 0.35
ATG4B-206ENST00000405546 RASGRF1Q13972 1273 aa17.24■□□□□ 0.35
ATG4B-206ENST00000405546 ZSCAN26Q16670 478 aa17.24■□□□□ 0.35
ATG4B-206ENST00000405546 FBXO3Q9UK99 471 aa17.24■□□□□ 0.35
ATG4B-206ENST00000405546 TRPM3Q9HCF6 1732 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-206ENST00000405546 NEDD4P46934 1319 aa17.24■□□□□ 0.35
ATG4B-206ENST00000405546 WDHD1O75717 1129 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-206ENST00000405546 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
ATG4B-206ENST00000405546 SUSD4Q5VX71 490 aa17.23■□□□□ 0.35
ATG4B-206ENST00000405546 CREBRFQ8IUR6 639 aa17.23■□□□□ 0.35
ATG4B-206ENST00000405546 JMYQ8N9B5 988 aa17.23■□□□□ 0.35
ATG4B-206ENST00000405546 SALL1Q9NSC2 1324 aa17.23■□□□□ 0.35
ATG4B-206ENST00000405546 FANCGO15287 622 aa17.23■□□□□ 0.35
ATG4B-206ENST00000405546 NRDCO43847 1150 aa17.23■□□□□ 0.35
ATG4B-206ENST00000405546 AKAP17AQ02040 695 aaKnown RBP17.23■□□□□ 0.35
ATG4B-206ENST00000405546 PNOCQ13519 176 aa17.23■□□□□ 0.35
ATG4B-206ENST00000405546 CFAP100Q494V2 611 aa17.23■□□□□ 0.35
ATG4B-206ENST00000405546 CNNM3Q8NE01 707 aa17.23■□□□□ 0.35
ATG4B-206ENST00000405546 MCM6Q14566 821 aa17.23■□□□□ 0.35
ATG4B-206ENST00000405546 TRIM22Q8IYM9 498 aa17.23■□□□□ 0.35
ATG4B-206ENST00000405546 STRBPQ96SI9 672 aaKnown RBP17.23■□□□□ 0.35
ATG4B-206ENST00000405546 ARGLU1Q9NWB6 273 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-206ENST00000405546 PHRF1Q9P1Y6 1649 aaKnown RBP17.22■□□□□ 0.35
ATG4B-206ENST00000405546 CRYBG1Q9Y4K1 1723 aa17.22■□□□□ 0.35
ATG4B-206ENST00000405546 BTBD18B2RXH4 712 aa17.22■□□□□ 0.35
ATG4B-206ENST00000405546 YEATS4O95619 227 aa17.22■□□□□ 0.35
ATG4B-206ENST00000405546 WWC2Q6AWC2 1192 aa17.22■□□□□ 0.35
ATG4B-206ENST00000405546 SDR42E1Q8WUS8 393 aa17.22■□□□□ 0.35
ATG4B-206ENST00000405546 UBAC1Q9BSL1 405 aa17.22■□□□□ 0.35
ATG4B-206ENST00000405546 FAM53CQ9NYF3 392 aa17.22■□□□□ 0.35
ATG4B-206ENST00000405546 MTMR7Q9Y216 660 aa17.22■□□□□ 0.35
ATG4B-206ENST00000405546 COL5A2P05997 1499 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-206ENST00000405546 PRDM1O75626 825 aa17.22■□□□□ 0.35
ATG4B-206ENST00000405546 CYP7A1P22680 504 aa17.22■□□□□ 0.35
ATG4B-206ENST00000405546 IRX3P78415 501 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-206ENST00000405546 SMC1AQ14683 1233 aaKnown RBP17.22■□□□□ 0.35
ATG4B-206ENST00000405546 POLR3EQ9NVU0 708 aa17.22■□□□□ 0.35
ATG4B-206ENST00000405546 SOS2Q07890 1332 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-206ENST00000405546 SH2B2O14492 632 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-206ENST00000405546 UBE3CQ15386 1083 aa17.22■□□□□ 0.35
ATG4B-206ENST00000405546 OLFM4Q6UX06 510 aa17.22■□□□□ 0.35
ATG4B-206ENST00000405546 CCDC24Q8N4L8 307 aa17.22■□□□□ 0.35
ATG4B-206ENST00000405546 MYO1CO00159 1063 aa17.21■□□□□ 0.35
ATG4B-206ENST00000405546 RANBP6O60518 1105 aaKnown RBP17.21■□□□□ 0.35
ATG4B-206ENST00000405546 NEMFO60524 1076 aa17.21■□□□□ 0.35
ATG4B-206ENST00000405546 WTAPQ15007 396 aa17.21■□□□□ 0.35
ATG4B-206ENST00000405546 SMIM5Q71RC9 77 aa17.21■□□□□ 0.35
ATG4B-206ENST00000405546 NBPF3Q9H094 633 aa17.21■□□□□ 0.35
ATG4B-206ENST00000405546 JAG2Q9Y219 1238 aa17.21■□□□□ 0.35
ATG4B-206ENST00000405546 ZMYM6O95789 1325 aa17.21■□□□□ 0.35
ATG4B-206ENST00000405546 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
ATG4B-206ENST00000405546 KARSQ15046 597 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms