RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 GCC1Q96CN9 775 aa20.09■□□□□ 0.81
CGREF1-205ENST00000404694 DDX4Q9NQI0 724 aaKnown RBP20.09■□□□□ 0.81
CGREF1-205ENST00000404694 PIH1D3Q9NQM4 214 aaKnown RBP20.09■□□□□ 0.81
CGREF1-205ENST00000404694 NAA16Q6N069 864 aaPredicted RBP20.08■□□□□ 0.81
CGREF1-205ENST00000404694 MIGA2Q7L4E1 593 aa20.08■□□□□ 0.81
CGREF1-205ENST00000404694 SMC5Q8IY18 1101 aa20.08■□□□□ 0.81
CGREF1-205ENST00000404694 OPTNQ96CV9 577 aa20.08■□□□□ 0.81
CGREF1-205ENST00000404694 WRNIP1Q96S55 665 aa20.08■□□□□ 0.81
CGREF1-205ENST00000404694 CSADQ9Y600 493 aa20.08■□□□□ 0.81
CGREF1-205ENST00000404694 NDUFB9Q9Y6M9 179 aa20.08■□□□□ 0.81
CGREF1-205ENST00000404694 MANSC4A6NHS7 340 aaPredicted RBP20.08■□□□□ 0.8
CGREF1-205ENST00000404694 PICALMQ13492 652 aa20.08■□□□□ 0.8
CGREF1-205ENST00000404694 ZNF341Q9BYN7 854 aa20.08■□□□□ 0.8
CGREF1-205ENST00000404694 CDK5RAP2Q96SN8 1893 aa20.07■□□□□ 0.8
CGREF1-205ENST00000404694 ATRNL1Q5VV63 1379 aa20.07■□□□□ 0.8
CGREF1-205ENST00000404694 IGSF3O75054 1194 aa20.07■□□□□ 0.8
CGREF1-205ENST00000404694 MAP4K4O95819 1239 aaPredicted RBP20.07■□□□□ 0.8
CGREF1-205ENST00000404694 IFIT2P09913 472 aaKnown RBP20.07■□□□□ 0.8
CGREF1-205ENST00000404694 SH3BP5LQ7L8J4 393 aa20.07■□□□□ 0.8
CGREF1-205ENST00000404694 CNKSR2Q8WXI2 1034 aa20.07■□□□□ 0.8
CGREF1-205ENST00000404694 SNCAIPQ9Y6H5 919 aa20.07■□□□□ 0.8
CGREF1-205ENST00000404694 ADGRA1Q86SQ6 560 aa20.06■□□□□ 0.8
CGREF1-205ENST00000404694 ZKSCAN4Q969J2 545 aaPredicted RBP20.06■□□□□ 0.8
CGREF1-205ENST00000404694 BCL11AQ9H165 835 aa20.06■□□□□ 0.8
CGREF1-205ENST00000404694 ANTXR1Q9H6X2 564 aa20.06■□□□□ 0.8
CGREF1-205ENST00000404694 FOCADQ5VW36 1801 aa20.05■□□□□ 0.8
CGREF1-205ENST00000404694 NPM3O75607 178 aaKnown RBP20.05■□□□□ 0.8
CGREF1-205ENST00000404694 IDH1O75874 414 aaKnown RBP20.05■□□□□ 0.8
CGREF1-205ENST00000404694 INHBEP58166 350 aa20.05■□□□□ 0.8
CGREF1-205ENST00000404694 ZSCAN29Q8IWY8 852 aaPredicted RBP20.05■□□□□ 0.8
CGREF1-205ENST00000404694 NOL10Q9BSC4 688 aaKnown RBP20.05■□□□□ 0.8
CGREF1-205ENST00000404694 LRRCC1Q9C099 1032 aa20.05■□□□□ 0.8
CGREF1-205ENST00000404694 DCTPP1Q9H773 170 aa20.05■□□□□ 0.8
CGREF1-205ENST00000404694 AATFQ9NY61 560 aaKnown RBP eCLIP20.05■□□□□ 0.8
CGREF1-205ENST00000404694 ZNF112Q9UJU3 913 aa20.05■□□□□ 0.8
CGREF1-205ENST00000404694 COL2A1P02458 1487 aaPredicted RBP20.04■□□□□ 0.8
CGREF1-205ENST00000404694 DDTLA6NHG4 134 aaPredicted RBP20.04■□□□□ 0.8
CGREF1-205ENST00000404694 SPDYE5A6NIY4 337 aa20.04■□□□□ 0.8
CGREF1-205ENST00000404694 INPP5BP32019 993 aa20.04■□□□□ 0.8
CGREF1-205ENST00000404694 SH3RF3Q8TEJ3 882 aaPredicted RBP20.04■□□□□ 0.8
CGREF1-205ENST00000404694 OTUD5Q96G74 571 aa20.04■□□□□ 0.8
CGREF1-205ENST00000404694 BAG3O95817 575 aa20.03■□□□□ 0.8
CGREF1-205ENST00000404694 IFNL1Q8IU54 200 aa20.03■□□□□ 0.8
CGREF1-205ENST00000404694 TEX11Q8IYF3 940 aa20.03■□□□□ 0.8
CGREF1-205ENST00000404694 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.03■□□□□ 0.8
CGREF1-205ENST00000404694 IGF2BP3O00425 579 aaKnown RBP eCLIP20.02■□□□□ 0.8
CGREF1-205ENST00000404694 TBC1D8O95759 1140 aa20.02■□□□□ 0.8
CGREF1-205ENST00000404694 CYP7A1P22680 504 aa20.02■□□□□ 0.8
CGREF1-205ENST00000404694 PPP4CP60510 307 aa20.02■□□□□ 0.8
CGREF1-205ENST00000404694 ERO1BQ86YB8 467 aa20.02■□□□□ 0.8
CGREF1-205ENST00000404694 MS4A4AQ96JQ5 239 aa20.02■□□□□ 0.8
CGREF1-205ENST00000404694 CFHR5Q9BXR6 569 aa20.02■□□□□ 0.8
CGREF1-205ENST00000404694 OSBPL5Q9H0X9 879 aaPredicted RBP20.02■□□□□ 0.8
CGREF1-205ENST00000404694 TESPA1A2RU30 521 aaPredicted RBP20.01■□□□□ 0.79
CGREF1-205ENST00000404694 SMARCA5O60264 1052 aaPredicted RBP20.01■□□□□ 0.79
CGREF1-205ENST00000404694 ALDH1A1P00352 501 aa20.01■□□□□ 0.79
CGREF1-205ENST00000404694 PLCG2P16885 1265 aa20.01■□□□□ 0.79
CGREF1-205ENST00000404694 MAP3K12Q12852 859 aa20.01■□□□□ 0.79
CGREF1-205ENST00000404694 MAGEB6Q8N7X4 407 aa20.01■□□□□ 0.79
CGREF1-205ENST00000404694 SLURP2P0DP57 97 aa20■□□□□ 0.79
CGREF1-205ENST00000404694 GTF2A2P52657 109 aa20■□□□□ 0.79
CGREF1-205ENST00000404694 MAP3K10Q02779 954 aa20■□□□□ 0.79
CGREF1-205ENST00000404694 TTF1Q15361 905 aaPredicted RBP20■□□□□ 0.79
CGREF1-205ENST00000404694 NOL9Q5SY16 702 aaKnown RBP20■□□□□ 0.79
CGREF1-205ENST00000404694 DNAJC2Q99543 621 aaKnown RBP20■□□□□ 0.79
CGREF1-205ENST00000404694 DOCK1Q14185 1865 aa20■□□□□ 0.79
CGREF1-205ENST00000404694 SIPA1L1O43166 1804 aa20■□□□□ 0.79
CGREF1-205ENST00000404694 PHF20L1A8MW92 1017 aa19.99■□□□□ 0.79
CGREF1-205ENST00000404694 PPIL2Q13356 520 aa19.99■□□□□ 0.79
CGREF1-205ENST00000404694 TMED8Q6PL24 325 aaPredicted RBP19.99■□□□□ 0.79
CGREF1-205ENST00000404694 PTPN18Q99952 460 aa19.99■□□□□ 0.79
CGREF1-205ENST00000404694 CCL15-CCL14A0A0B4J2E2 113 aa19.98■□□□□ 0.79
CGREF1-205ENST00000404694 GOLIM4O00461 696 aa19.98■□□□□ 0.79
CGREF1-205ENST00000404694 IRF6O14896 467 aa19.98■□□□□ 0.79
CGREF1-205ENST00000404694 ATP5JP18859 108 aa19.98■□□□□ 0.79
CGREF1-205ENST00000404694 DYNLL1P63167 89 aaKnown RBP19.98■□□□□ 0.79
CGREF1-205ENST00000404694 NUCB1Q02818 461 aa19.98■□□□□ 0.79
CGREF1-205ENST00000404694 PPATQ06203 517 aa19.98■□□□□ 0.79
CGREF1-205ENST00000404694 CCL15Q16663 113 aa19.98■□□□□ 0.79
CGREF1-205ENST00000404694 MIGA1Q8NAN2 632 aa19.98■□□□□ 0.79
CGREF1-205ENST00000404694 TGFBRAP1Q8WUH2 860 aa19.98■□□□□ 0.79
CGREF1-205ENST00000404694 BRI3BPQ8WY22 251 aa19.98■□□□□ 0.79
CGREF1-205ENST00000404694 BOLA2Q9H3K6 86 aa19.98■□□□□ 0.79
CGREF1-205ENST00000404694 R3HDMLQ9H3Y0 253 aa19.98■□□□□ 0.79
CGREF1-205ENST00000404694 FLT1P17948 1338 aa19.98■□□□□ 0.79
CGREF1-205ENST00000404694 GPR25O00155 361 aa19.97■□□□□ 0.79
CGREF1-205ENST00000404694 NOM1Q5C9Z4 860 aaKnown RBP19.97■□□□□ 0.79
CGREF1-205ENST00000404694 OTUD7BQ6GQQ9 843 aa19.97■□□□□ 0.79
CGREF1-205ENST00000404694 ZNF296Q8WUU4 475 aaPredicted RBP19.97■□□□□ 0.79
CGREF1-205ENST00000404694 EDC3Q96F86 508 aaKnown RBP19.97■□□□□ 0.79
CGREF1-205ENST00000404694 ZBTB47Q9UFB7 747 aaPredicted RBP19.97■□□□□ 0.79
CGREF1-205ENST00000404694 FAM196BA6NMK8 535 aa19.96■□□□□ 0.79
CGREF1-205ENST00000404694 TBC1D12O60347 775 aa19.96■□□□□ 0.79
CGREF1-205ENST00000404694 CERS3Q8IU89 383 aa19.96■□□□□ 0.79
CGREF1-205ENST00000404694 MAPKAPK5Q8IW41 473 aa19.96■□□□□ 0.79
CGREF1-205ENST00000404694 SCYL3Q8IZE3 742 aa19.96■□□□□ 0.79
CGREF1-205ENST00000404694 PAG1Q9NWQ8 432 aa19.96■□□□□ 0.79
CGREF1-205ENST00000404694 MYH7P12883 1935 aa19.96■□□□□ 0.79
CGREF1-205ENST00000404694 ATAD5Q96QE3 1844 aa19.96■□□□□ 0.79
CGREF1-205ENST00000404694 CETPP11597 493 aa19.95■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms