RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 USP2O75604 605 aaPredicted RBP17.65■□□□□ 0.42
CDPF1-203ENST00000404583 NEFLP07196 543 aa17.65■□□□□ 0.42
CDPF1-203ENST00000404583 PLCG2P16885 1265 aa17.65■□□□□ 0.42
CDPF1-203ENST00000404583 ADD2P35612 726 aa17.65■□□□□ 0.42
CDPF1-203ENST00000404583 HHIPL1Q96JK4 782 aa17.65■□□□□ 0.42
CDPF1-203ENST00000404583 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.65■□□□□ 0.42
CDPF1-203ENST00000404583 RPAP1Q9BWH6 1393 aaPredicted RBP17.65■□□□□ 0.42
CDPF1-203ENST00000404583 FOCADQ5VW36 1801 aa17.65■□□□□ 0.42
CDPF1-203ENST00000404583 RGMBQ6NW40 437 aa17.64■□□□□ 0.42
CDPF1-203ENST00000404583 SH3BP5LQ7L8J4 393 aa17.64■□□□□ 0.42
CDPF1-203ENST00000404583 PLEKHM2Q8IWE5 1019 aa17.64■□□□□ 0.42
CDPF1-203ENST00000404583 KBTBD3Q8NAB2 608 aa17.64■□□□□ 0.42
CDPF1-203ENST00000404583 TGFBRAP1Q8WUH2 860 aa17.64■□□□□ 0.42
CDPF1-203ENST00000404583 CAPNS2Q96L46 248 aa17.64■□□□□ 0.42
CDPF1-203ENST00000404583 WDR33Q9C0J8 1336 aaKnown RBP17.64■□□□□ 0.41
CDPF1-203ENST00000404583 MAGEB6P1A0A0J9YX57 407 aa17.64■□□□□ 0.41
CDPF1-203ENST00000404583 DDTLA6NHG4 134 aaPredicted RBP17.64■□□□□ 0.41
CDPF1-203ENST00000404583 ZNF157P51786 506 aaPredicted RBP17.64■□□□□ 0.41
CDPF1-203ENST00000404583 MAP3K11Q16584 847 aa17.64■□□□□ 0.41
CDPF1-203ENST00000404583 MIGA2Q7L4E1 593 aa17.64■□□□□ 0.41
CDPF1-203ENST00000404583 ZSCAN29Q8IWY8 852 aaPredicted RBP17.64■□□□□ 0.41
CDPF1-203ENST00000404583 RIOK1Q9BRS2 568 aaKnown RBP17.64■□□□□ 0.41
CDPF1-203ENST00000404583 NPM3O75607 178 aaKnown RBP17.63■□□□□ 0.41
CDPF1-203ENST00000404583 ECE1P42892 770 aa17.63■□□□□ 0.41
CDPF1-203ENST00000404583 UBE3CQ15386 1083 aa17.63■□□□□ 0.41
CDPF1-203ENST00000404583 LDLRAD1Q5T700 205 aa17.63■□□□□ 0.41
CDPF1-203ENST00000404583 ZSCAN25Q6NSZ9 544 aa17.63■□□□□ 0.41
CDPF1-203ENST00000404583 MAPKAPK5Q8IW41 473 aa17.63■□□□□ 0.41
CDPF1-203ENST00000404583 OSBPL5Q9H0X9 879 aaPredicted RBP17.63■□□□□ 0.41
CDPF1-203ENST00000404583 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.63■□□□□ 0.41
CDPF1-203ENST00000404583 PDE4AP27815 886 aa17.62■□□□□ 0.41
CDPF1-203ENST00000404583 IREB2P48200 963 aaKnown RBP17.62■□□□□ 0.41
CDPF1-203ENST00000404583 HOOK2Q96ED9 719 aa17.62■□□□□ 0.41
CDPF1-203ENST00000404583 CSRNP1Q96S65 589 aa17.62■□□□□ 0.41
CDPF1-203ENST00000404583 OSBPL3Q9H4L5 887 aa17.62■□□□□ 0.41
CDPF1-203ENST00000404583 AOC2O75106 756 aa17.61■□□□□ 0.41
CDPF1-203ENST00000404583 SLURP2P0DP57 97 aa17.61■□□□□ 0.41
CDPF1-203ENST00000404583 CERS3Q8IU89 383 aa17.61■□□□□ 0.41
CDPF1-203ENST00000404583 LCORLQ8N3X6 602 aa17.61■□□□□ 0.41
CDPF1-203ENST00000404583 CLMNQ96JQ2 1002 aa17.61■□□□□ 0.41
CDPF1-203ENST00000404583 FSD1Q9BTV5 496 aa17.61■□□□□ 0.41
CDPF1-203ENST00000404583 FLT1P17948 1338 aa17.61■□□□□ 0.41
CDPF1-203ENST00000404583 MYH1P12882 1939 aa17.61■□□□□ 0.41
CDPF1-203ENST00000404583 OTOFQ9HC10 1997 aa17.61■□□□□ 0.41
CDPF1-203ENST00000404583 FAM155AB1AL88 458 aaPredicted RBP17.6■□□□□ 0.41
CDPF1-203ENST00000404583 RNF113AO15541 343 aaKnown RBP17.6■□□□□ 0.41
CDPF1-203ENST00000404583 USP5P45974 858 aa17.6■□□□□ 0.41
CDPF1-203ENST00000404583 DCAF15Q66K64 600 aa17.6■□□□□ 0.41
CDPF1-203ENST00000404583 PUS7LQ9H0K6 701 aaKnown RBP17.6■□□□□ 0.41
CDPF1-203ENST00000404583 ARMT1Q9H993 441 aa17.6■□□□□ 0.41
CDPF1-203ENST00000404583 WBP1LQ9NX94 342 aa17.6■□□□□ 0.41
CDPF1-203ENST00000404583 MBD4O95243 580 aa17.59■□□□□ 0.41
CDPF1-203ENST00000404583 SLC10A3P09131 477 aa17.59■□□□□ 0.41
CDPF1-203ENST00000404583 RASAL3Q86YV0 1011 aa17.59■□□□□ 0.41
CDPF1-203ENST00000404583 ANKRD13AQ8IZ07 590 aa17.59■□□□□ 0.41
CDPF1-203ENST00000404583 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDPF1-203ENST00000404583 CCDC102AQ96A19 550 aa17.59■□□□□ 0.41
CDPF1-203ENST00000404583 AIDAQ96BJ3 306 aa17.59■□□□□ 0.41
CDPF1-203ENST00000404583 EVI5LQ96CN4 794 aa17.59■□□□□ 0.41
CDPF1-203ENST00000404583 SLC10A4Q96EP9 437 aa17.59■□□□□ 0.41
CDPF1-203ENST00000404583 ZNF341Q9BYN7 854 aa17.59■□□□□ 0.41
CDPF1-203ENST00000404583 SAP30BPQ9UHR5 308 aaKnown RBP17.59■□□□□ 0.41
CDPF1-203ENST00000404583 ATRNL1Q5VV63 1379 aa17.59■□□□□ 0.41
CDPF1-203ENST00000404583 TRIM6-TRIM34B2RNG4 842 aa17.58■□□□□ 0.41
CDPF1-203ENST00000404583 ZFYP08048 801 aaPredicted RBP17.58■□□□□ 0.41
CDPF1-203ENST00000404583 LBX1P52954 281 aa17.58■□□□□ 0.41
CDPF1-203ENST00000404583 MAP3K9P80192 1104 aa17.58■□□□□ 0.41
CDPF1-203ENST00000404583 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.58■□□□□ 0.41
CDPF1-203ENST00000404583 OSBP2Q969R2 916 aa17.58■□□□□ 0.41
CDPF1-203ENST00000404583 WRNIP1Q96S55 665 aa17.58■□□□□ 0.41
CDPF1-203ENST00000404583 ZIC5Q96T25 663 aa17.58■□□□□ 0.41
CDPF1-203ENST00000404583 CRNKL1Q9BZJ0 848 aaKnown RBP17.58■□□□□ 0.41
CDPF1-203ENST00000404583 PALD1Q9ULE6 856 aa17.58■□□□□ 0.41
CDPF1-203ENST00000404583 THSD7BQ9C0I4 1608 aa17.58■□□□□ 0.4
CDPF1-203ENST00000404583 UNCXA6NJT0 531 aa17.57■□□□□ 0.4
CDPF1-203ENST00000404583 SLC4A8Q2Y0W8 1093 aa17.57■□□□□ 0.4
CDPF1-203ENST00000404583 LRRFIP1Q32MZ4 808 aaKnown RBP17.57■□□□□ 0.4
CDPF1-203ENST00000404583 CENPQQ7L2Z9 268 aaPredicted RBP17.57■□□□□ 0.4
CDPF1-203ENST00000404583 SDR42E1Q8WUS8 393 aa17.57■□□□□ 0.4
CDPF1-203ENST00000404583 APPBP2Q92624 585 aa17.57■□□□□ 0.4
CDPF1-203ENST00000404583 ZKSCAN4Q969J2 545 aaPredicted RBP17.57■□□□□ 0.4
CDPF1-203ENST00000404583 RILPL2Q969X0 211 aa17.57■□□□□ 0.4
CDPF1-203ENST00000404583 CCDC136Q96JN2 1154 aa17.57■□□□□ 0.4
CDPF1-203ENST00000404583 DHX36Q9H2U1 1008 aaKnown RBP17.57■□□□□ 0.4
CDPF1-203ENST00000404583 COL2A1P02458 1487 aaPredicted RBP17.57■□□□□ 0.4
CDPF1-203ENST00000404583 SIPA1L1O43166 1804 aa17.57■□□□□ 0.4
CDPF1-203ENST00000404583 FAM196BA6NMK8 535 aa17.56■□□□□ 0.4
CDPF1-203ENST00000404583 PRKAB2O43741 272 aa17.56■□□□□ 0.4
CDPF1-203ENST00000404583 INPP5BP32019 993 aa17.56■□□□□ 0.4
CDPF1-203ENST00000404583 CTCFP49711 727 aaPredicted RBP17.56■□□□□ 0.4
CDPF1-203ENST00000404583 MAP3K10Q02779 954 aa17.56■□□□□ 0.4
CDPF1-203ENST00000404583 MKRN3Q13064 507 aaKnown RBP17.56■□□□□ 0.4
CDPF1-203ENST00000404583 NOGQ13253 232 aa17.56■□□□□ 0.4
CDPF1-203ENST00000404583 VGLL4Q14135 290 aa17.56■□□□□ 0.4
CDPF1-203ENST00000404583 SEC62Q99442 399 aaKnown RBP17.56■□□□□ 0.4
CDPF1-203ENST00000404583 ELP3Q9H9T3 547 aa17.56■□□□□ 0.4
CDPF1-203ENST00000404583 PI4KBQ9UBF8 816 aa17.56■□□□□ 0.4
CDPF1-203ENST00000404583 ZNF112Q9UJU3 913 aa17.56■□□□□ 0.4
CDPF1-203ENST00000404583 BAZ2AQ9UIF9 1905 aaKnown RBP17.56■□□□□ 0.4
CDPF1-203ENST00000404583 NAV1Q8NEY1 1877 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms