RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 TUBB2BQ9BVA1 445 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 GPHNQ9NQX3 736 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 PDE4DQ08499 809 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 PHLDB2Q86SQ0 1253 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 CADPS2Q86UW7 1296 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 IFT20Q8IY31 132 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 ZKSCAN5Q9Y2L8 839 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 CCNT1O60563 726 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 LPXNO60711 386 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 ZNF174Q15697 407 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 LETM2Q2VYF4 491 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 USH1CQ9Y6N9 552 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 IGHDP01880 384 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 IRX3P78415 501 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 RUFY3Q7L099 469 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 CROCCP2Q86T23 111 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 DZIP3Q86Y13 1208 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 PLCB1Q9NQ66 1216 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 OGFRQ9NZT2 677 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 TTC41PQ6P2S7 1318 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 DENND4BO75064 1496 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 ANKRD36BQ8N2N9 1353 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 A0A1B0GUA9 196 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 DKC1O60832 514 aaKnown RBP eCLIP13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 HAUS3Q68CZ6 603 aa13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 DDX27Q96GQ7 796 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-219ENST00000399649 ATP8B2P98198 1209 aa13.72□□□□□ -0.21
CACNA1C-219ENST00000399649 NCOA1Q15788 1441 aa13.72□□□□□ -0.21
CACNA1C-219ENST00000399649 RAB3GAP1Q15042 981 aa13.72□□□□□ -0.21
CACNA1C-219ENST00000399649 CCDC89Q8N998 374 aa13.72□□□□□ -0.21
CACNA1C-219ENST00000399649 SAP30BPQ9UHR5 308 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-219ENST00000399649 HMGXB3Q12766 1538 aa13.72□□□□□ -0.21
CACNA1C-219ENST00000399649 CREB3L3Q68CJ9 461 aa13.72□□□□□ -0.21
CACNA1C-219ENST00000399649 HVCN1Q96D96 273 aa13.72□□□□□ -0.21
CACNA1C-219ENST00000399649 CHRNA2Q15822 529 aa13.72□□□□□ -0.21
CACNA1C-219ENST00000399649 ARHGAP45Q92619 1136 aa13.72□□□□□ -0.21
CACNA1C-219ENST00000399649 CLSTN2Q9H4D0 955 aa13.72□□□□□ -0.21
CACNA1C-219ENST00000399649 WDR46O15213 610 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-219ENST00000399649 MYL5Q02045 173 aa13.72□□□□□ -0.21
CACNA1C-219ENST00000399649 PPP1R12CQ9BZL4 782 aa13.72□□□□□ -0.21
CACNA1C-219ENST00000399649 KSR2Q6VAB6 950 aa13.71□□□□□ -0.21
CACNA1C-219ENST00000399649 TPTE2Q6XPS3 522 aa13.71□□□□□ -0.21
CACNA1C-219ENST00000399649 POTEDQ86YR6 584 aa13.71□□□□□ -0.21
CACNA1C-219ENST00000399649 MEIS3Q99687 375 aa13.71□□□□□ -0.21
CACNA1C-219ENST00000399649 RASSF4Q9H2L5 321 aa13.71□□□□□ -0.21
CACNA1C-219ENST00000399649 ARHGEF10LQ9HCE6 1279 aa13.71□□□□□ -0.21
CACNA1C-219ENST00000399649 GPCPD1Q9NPB8 672 aa13.71□□□□□ -0.21
CACNA1C-219ENST00000399649 EVCP57679 992 aa13.71□□□□□ -0.21
CACNA1C-219ENST00000399649 TTF2Q9UNY4 1162 aaKnown RBP13.71□□□□□ -0.21
CACNA1C-219ENST00000399649 ABCC5O15440 1437 aa13.71□□□□□ -0.21
CACNA1C-219ENST00000399649 NOP56O00567 594 aaKnown RBP13.71□□□□□ -0.21
CACNA1C-219ENST00000399649 ATL3Q6DD88 541 aa13.71□□□□□ -0.21
CACNA1C-219ENST00000399649 TXNDC9O14530 226 aa13.71□□□□□ -0.22
CACNA1C-219ENST00000399649 CASC4Q6P4E1 433 aa13.71□□□□□ -0.22
CACNA1C-219ENST00000399649 TTC6Q86TZ1 520 aa13.71□□□□□ -0.22
CACNA1C-219ENST00000399649 STMN1P16949 149 aa13.71□□□□□ -0.22
CACNA1C-219ENST00000399649 RXRAP19793 462 aa13.71□□□□□ -0.22
CACNA1C-219ENST00000399649 AK2P54819 239 aa13.71□□□□□ -0.22
CACNA1C-219ENST00000399649 NBPF14Q5TI25 921 aa13.71□□□□□ -0.22
CACNA1C-219ENST00000399649 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.22
CACNA1C-219ENST00000399649 USTQ9Y2C2 406 aa13.71□□□□□ -0.22
CACNA1C-219ENST00000399649 PDE1CQ14123 709 aaPredicted RBP13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 IGSF22Q8N9C0 903 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 NUP58Q9BVL2 599 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 RTCBQ9Y3I0 505 aaKnown RBP13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 HMGB1P1B2RPK0 211 aaPredicted RBP13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 RNASE9P60153 205 aaKnown RBP13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 TBC1D8BQ0IIM8 1120 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 SETSIPP0DME0 302 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 ASIC3Q9UHC3 531 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 SCAF11Q99590 1463 aaKnown RBP13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 GTF3C6Q969F1 213 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 ANKFY1Q9P2R3 1169 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 BCAP29Q9UHQ4 241 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 NOC2LQ9Y3T9 749 aaKnown RBP13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 ARHGEF35A5YM69 484 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 GOLGA6CA6NDK9 693 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 A6NNZ2 444 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 GOLGA6DP0CG33 693 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 PRIM1P49642 420 aaKnown RBP13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 CLNS1AP54105 237 aaKnown RBP13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 SLC12A2P55011 1212 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 TUBB8Q3ZCM7 444 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 AKAP4Q5JQC9 854 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 DHX32Q7L7V1 743 aaKnown RBP13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 GOLGA6AQ9NYA3 693 aa13.7□□□□□ -0.22
CACNA1C-219ENST00000399649 IRS4O14654 1257 aaPredicted RBP13.69□□□□□ -0.22
CACNA1C-219ENST00000399649 ZBTB24O43167 697 aaPredicted RBP13.69□□□□□ -0.22
CACNA1C-219ENST00000399649 CLCN1P35523 988 aa13.69□□□□□ -0.22
CACNA1C-219ENST00000399649 SNX21Q969T3 373 aa13.69□□□□□ -0.22
CACNA1C-219ENST00000399649 RIOK1Q9BRS2 568 aaKnown RBP13.69□□□□□ -0.22
CACNA1C-219ENST00000399649 VPS16Q9H269 839 aa13.69□□□□□ -0.22
CACNA1C-219ENST00000399649 DENND2AQ9ULE3 1009 aa13.69□□□□□ -0.22
CACNA1C-219ENST00000399649 GOLGA6BA6NDN3 693 aa13.69□□□□□ -0.22
CACNA1C-219ENST00000399649 VSIG1Q86XK7 387 aa13.69□□□□□ -0.22
CACNA1C-219ENST00000399649 SECISBP2LQ93073 1101 aaKnown RBP13.69□□□□□ -0.22
CACNA1C-219ENST00000399649 ACEP12821 1306 aa13.69□□□□□ -0.22
CACNA1C-219ENST00000399649 M0QZ92 97 aa13.69□□□□□ -0.22
CACNA1C-219ENST00000399649 MAN1A1P33908 653 aa13.69□□□□□ -0.22
CACNA1C-219ENST00000399649 SYCE1Q8N0S2 351 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms