RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 INF2Q27J81 1249 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 ARMC9Q7Z3E5 817 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 EMILIN1Q9Y6C2 1016 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 RUSC2Q8N2Y8 1516 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 GOLGA6CA6NDK9 693 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 GOLGA6BA6NDN3 693 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 GOLGA6DP0CG33 693 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 SAT1P21673 171 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 ELMSAN1Q6PJG2 1045 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 ZNF513Q8N8E2 541 aaPredicted RBP12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 LZTFL1Q9NQ48 299 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 GOLGA6AQ9NYA3 693 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 KIF21BO75037 1637 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 IFRD2Q12894 506 aaPredicted RBP12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 IFT74Q96LB3 600 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 NEK1Q96PY6 1258 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 TRIM37O94972 964 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 TNFAIP1Q13829 316 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 KRBA2Q6ZNG9 492 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 TTC6Q86TZ1 520 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 TTC21BQ7Z4L5 1316 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 IRS4O14654 1257 aaPredicted RBP12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 HAND2P61296 217 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 MSANTD4Q8NCY6 345 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 FNDC3AQ9Y2H6 1198 aaKnown RBP12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 KRT10P13645 584 aa12.42□□□□□ -0.42
CACNA1C-217ENST00000399641 PDE6AP16499 860 aa12.42□□□□□ -0.42
CACNA1C-217ENST00000399641 UBA7P41226 1012 aa12.42□□□□□ -0.42
CACNA1C-217ENST00000399641 RRP36Q96EU6 259 aaKnown RBP12.42□□□□□ -0.42
CACNA1C-217ENST00000399641 RILPQ96NA2 401 aa12.42□□□□□ -0.42
CACNA1C-217ENST00000399641 TFIP11Q9UBB9 837 aaKnown RBP12.42□□□□□ -0.42
CACNA1C-217ENST00000399641 FAF1Q9UNN5 650 aaPredicted RBP12.42□□□□□ -0.42
CACNA1C-217ENST00000399641 H0YC42 278 aa12.42□□□□□ -0.42
CACNA1C-217ENST00000399641 HIP1RO75146 1068 aa12.42□□□□□ -0.42
CACNA1C-217ENST00000399641 NPR1P16066 1061 aa12.42□□□□□ -0.42
CACNA1C-217ENST00000399641 PLB1Q6P1J6 1458 aa12.42□□□□□ -0.42
CACNA1C-217ENST00000399641 FANCAO15360 1455 aa12.42□□□□□ -0.42
CACNA1C-217ENST00000399641 DNM2P50570 870 aa12.42□□□□□ -0.42
CACNA1C-217ENST00000399641 NOP14P78316 857 aaKnown RBP12.42□□□□□ -0.42
CACNA1C-217ENST00000399641 RAPGEF1Q13905 1077 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 JADE1Q6IE81 842 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 N4BP3O15049 544 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 ITKQ08881 620 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 TMED1Q13445 227 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 ABI1Q8IZP0 508 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 FBXO2Q9UK22 296 aaPredicted RBP12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 MTUS1Q9ULD2 1270 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 HMGB1P09429 215 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 TEX11Q8IYF3 940 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 USTQ9Y2C2 406 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 PEX19P40855 299 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 WTAPQ15007 396 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 IFNLR1Q8IU57 520 aaPredicted RBP12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 PLVAPQ9BX97 442 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 CTAGE15A4D2H0 777 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 DIAPH2O60879 1101 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 CTAGE8P0CG41 777 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 DCAF17Q5H9S7 520 aaPredicted RBP12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 CTAGE4Q8IX94 777 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 CPXCR1Q8N123 301 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 FNBP4Q8N3X1 1017 aaPredicted RBP12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 CCDC24Q8N4L8 307 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 GBP5Q96PP8 586 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 TRIM31Q9BZY9 425 aa12.41□□□□□ -0.42
CACNA1C-217ENST00000399641 ARHGAP42A6NI28 874 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 ADCY5O95622 1261 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 TCP10Q12799 353 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 RPS6KA2Q15349 733 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 DPP9Q86TI2 863 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 AFAP1L1Q8TED9 768 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 UIMC1Q96RL1 719 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 GNAQP50148 359 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 MICU3Q86XE3 530 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 SLC26A6Q9BXS9 759 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 F6X3S4 739 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 PMS1P54277 932 aaKnown RBP12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 LRCH2Q5VUJ6 765 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 XAGE3Q8WTP9 111 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 ESR2Q92731 530 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 SKOR1P84550 965 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 CCDC183Q5T5S1 534 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 TROQ12816 1431 aaPredicted RBP12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 CCDC62Q6P9F0 684 aa12.4□□□□□ -0.42
CACNA1C-217ENST00000399641 TMEM259Q4ZIN3 620 aa12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 DCAF15Q66K64 600 aa12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 KRT23Q9C075 422 aa12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 KIF2AO00139 706 aaPredicted RBP12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 FMNL1O95466 1100 aaPredicted RBP12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 TBCCQ15814 346 aa12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 HELBQ8NG08 1087 aaPredicted RBP12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 LEO1Q8WVC0 666 aaPredicted RBP12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 NUCKS1Q9H1E3 243 aaKnown RBP12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 NKIRAS1Q9NYS0 192 aa12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 DNAI1Q9UI46 699 aa12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 GUCA1BQ9UMX6 200 aa12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 NBPF7P0C2Y1 421 aaPredicted RBP12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 KRT3P12035 628 aa12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 IARSP41252 1262 aaKnown RBP12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 STAT6P42226 847 aa12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 PALM2Q8IXS6 379 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms