RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 BIRC3Q13489 604 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 CSGALNACT2Q8N6G5 542 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 UFL1O94874 794 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 ZNF202O95125 648 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 HPDP32754 393 aaPredicted RBP14.78□□□□□ -0.04
ITSN1-208ENST00000399349 TRMT44Q8IYL2 757 aaKnown RBP14.78□□□□□ -0.04
ITSN1-208ENST00000399349 ANKRD2Q9GZV1 360 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 RBM28Q9NW13 759 aaKnown RBP14.78□□□□□ -0.04
ITSN1-208ENST00000399349 HIBADHP31937 336 aaKnown RBP14.78□□□□□ -0.04
ITSN1-208ENST00000399349 BEND3Q5T5X7 828 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 CCDC65Q8IXS2 484 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 KBTBD3Q8NAB2 608 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 CLSTN2Q9H4D0 955 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 NFE2L3Q9Y4A8 694 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 DUOX2Q9NRD8 1548 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 UGGT2Q9NYU1 1516 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 ASXL2Q76L83 1435 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 PUM3Q15397 648 aaKnown RBP14.78□□□□□ -0.04
ITSN1-208ENST00000399349 UTP14CQ5TAP6 766 aaKnown RBP14.78□□□□□ -0.04
ITSN1-208ENST00000399349 MSL1Q68DK7 614 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 FNBP4Q8N3X1 1017 aaPredicted RBP14.78□□□□□ -0.04
ITSN1-208ENST00000399349 MRRFQ96E11 262 aaKnown RBP14.78□□□□□ -0.04
ITSN1-208ENST00000399349 TMEM87BQ96K49 555 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 DENND2AQ9ULE3 1009 aa14.78□□□□□ -0.04
ITSN1-208ENST00000399349 ZAP70P43403 619 aa14.77□□□□□ -0.04
ITSN1-208ENST00000399349 CCDC121Q6ZUS5 278 aa14.77□□□□□ -0.04
ITSN1-208ENST00000399349 C10orf67Q8IYJ2 551 aa14.77□□□□□ -0.04
ITSN1-208ENST00000399349 NUP153P49790 1475 aaKnown RBP14.77□□□□□ -0.04
ITSN1-208ENST00000399349 MRPL12P52815 198 aaKnown RBP14.77□□□□□ -0.04
ITSN1-208ENST00000399349 DYMQ7RTS9 669 aa14.77□□□□□ -0.04
ITSN1-208ENST00000399349 TRIM31Q9BZY9 425 aa14.77□□□□□ -0.04
ITSN1-208ENST00000399349 TBC1D7Q9P0N9 293 aa14.77□□□□□ -0.04
ITSN1-208ENST00000399349 PCDH11XQ9BZA7 1347 aa14.77□□□□□ -0.04
ITSN1-208ENST00000399349 PCDH11YQ9BZA8 1340 aa14.77□□□□□ -0.04
ITSN1-208ENST00000399349 ZNF500O60304 480 aaPredicted RBP14.77□□□□□ -0.05
ITSN1-208ENST00000399349 TNNC1P63316 161 aa14.77□□□□□ -0.05
ITSN1-208ENST00000399349 IRX3P78415 501 aaPredicted RBP14.77□□□□□ -0.05
ITSN1-208ENST00000399349 CALCOCO2Q13137 446 aa14.77□□□□□ -0.05
ITSN1-208ENST00000399349 KRT40Q6A162 431 aa14.77□□□□□ -0.05
ITSN1-208ENST00000399349 ZNF496Q96IT1 587 aaPredicted RBP14.77□□□□□ -0.05
ITSN1-208ENST00000399349 CHAMP1Q96JM3 812 aa14.77□□□□□ -0.05
ITSN1-208ENST00000399349 TAB2Q9NYJ8 693 aa14.77□□□□□ -0.05
ITSN1-208ENST00000399349 HGSO14964 777 aaPredicted RBP14.76□□□□□ -0.05
ITSN1-208ENST00000399349 KRT5P13647 590 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 RPL13P26373 211 aaKnown RBP14.76□□□□□ -0.05
ITSN1-208ENST00000399349 ATL3Q6DD88 541 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 ANKS4BQ8N8V4 417 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 JDP2Q8WYK2 163 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 ANTXR1Q9H6X2 564 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 TMEM63CQ9P1W3 806 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 PABPN1LA6NDY0 278 aaKnown RBP14.76□□□□□ -0.05
ITSN1-208ENST00000399349 PLCD1P51178 756 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 NBPF11Q86T75 865 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 DDX12PQ92771 950 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 TOM1O60784 492 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 ZNF75DP51815 510 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 SF3A3Q12874 501 aaKnown RBP eCLIP14.76□□□□□ -0.052e-7■■■■■ 27.2
ITSN1-208ENST00000399349 GCKRQ14397 625 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 ELF2Q15723 593 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 TTC38Q5R3I4 469 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 DNAJC10Q8IXB1 793 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 CNBD1Q8NA66 436 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 DDX17Q92841 729 aaKnown RBP14.76□□□□□ -0.05
ITSN1-208ENST00000399349 PARP3Q9Y6F1 533 aa14.76□□□□□ -0.05
ITSN1-208ENST00000399349 ERBB4Q15303 1308 aa14.75□□□□□ -0.05
ITSN1-208ENST00000399349 CCDC169A6NNP5 214 aa14.75□□□□□ -0.05
ITSN1-208ENST00000399349 SPOPO43791 374 aa14.75□□□□□ -0.05
ITSN1-208ENST00000399349 CMTR1Q8N1G2 835 aaKnown RBP14.75□□□□□ -0.05
ITSN1-208ENST00000399349 PPM1EQ8WY54 764 aa14.75□□□□□ -0.05
ITSN1-208ENST00000399349 LMBRD1Q9NUN5 540 aa14.75□□□□□ -0.05
ITSN1-208ENST00000399349 MTRF1LQ9UGC7 380 aaKnown RBP14.75□□□□□ -0.05
ITSN1-208ENST00000399349 ZFYVE9O95405 1425 aa14.75□□□□□ -0.05
ITSN1-208ENST00000399349 SYNRGQ9UMZ2 1314 aa14.75□□□□□ -0.05
ITSN1-208ENST00000399349 KRT9P35527 623 aa14.75□□□□□ -0.05
ITSN1-208ENST00000399349 BCL2L12Q9HB09 334 aa14.75□□□□□ -0.05
ITSN1-208ENST00000399349 GINS2Q9Y248 185 aa14.75□□□□□ -0.05
ITSN1-208ENST00000399349 FRMD4BQ9Y2L6 1034 aa14.75□□□□□ -0.05
ITSN1-208ENST00000399349 GTF2A1P52655 376 aaPredicted RBP14.75□□□□□ -0.05
ITSN1-208ENST00000399349 UAP1Q16222 522 aaPredicted RBP14.75□□□□□ -0.05
ITSN1-208ENST00000399349 PLEKHA4Q9H4M7 779 aa14.75□□□□□ -0.05
ITSN1-208ENST00000399349 FAM76AQ8TAV0 307 aa14.75□□□□□ -0.05
ITSN1-208ENST00000399349 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.75□□□□□ -0.05
ITSN1-208ENST00000399349 ERO1AQ96HE7 468 aa14.75□□□□□ -0.05
ITSN1-208ENST00000399349 YTHDC2Q9H6S0 1430 aaKnown RBP14.75□□□□□ -0.05
ITSN1-208ENST00000399349 TRAPPC3LQ5T215 181 aa14.74□□□□□ -0.05
ITSN1-208ENST00000399349 BLZF1Q9H2G9 400 aa14.74□□□□□ -0.05
ITSN1-208ENST00000399349 VPS54Q9P1Q0 977 aa14.74□□□□□ -0.05
ITSN1-208ENST00000399349 CEP83Q9Y592 693 aa14.74□□□□□ -0.05
ITSN1-208ENST00000399349 ZNF532Q9HCE3 1301 aa14.74□□□□□ -0.05
ITSN1-208ENST00000399349 DDX39AO00148 427 aaKnown RBP14.74□□□□□ -0.05
ITSN1-208ENST00000399349 HDXQ7Z353 690 aa14.74□□□□□ -0.05
ITSN1-208ENST00000399349 SSX2IPQ9Y2D8 614 aa14.74□□□□□ -0.05
ITSN1-208ENST00000399349 PDE8AO60658 829 aa14.74□□□□□ -0.05
ITSN1-208ENST00000399349 HERC4Q5GLZ8 1057 aaPredicted RBP14.74□□□□□ -0.05
ITSN1-208ENST00000399349 ARFGAP2Q8N6H7 521 aa14.74□□□□□ -0.05
ITSN1-208ENST00000399349 SMC6Q96SB8 1091 aa14.74□□□□□ -0.05
ITSN1-208ENST00000399349 NAPGQ99747 312 aaPredicted RBP14.74□□□□□ -0.05
ITSN1-208ENST00000399349 MTX1Q13505 466 aa14.74□□□□□ -0.05
ITSN1-208ENST00000399349 ME3Q16798 604 aa14.74□□□□□ -0.05
ITSN1-208ENST00000399349 NELFCDQ8IXH7 590 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms