RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 GJA5P36382 358 aa17.13■□□□□ 0.33
HLA-DQB1-202ENST00000399079 LBX1P52954 281 aa17.13■□□□□ 0.33
HLA-DQB1-202ENST00000399079 PPP4CP60510 307 aa17.13■□□□□ 0.33
HLA-DQB1-202ENST00000399079 MAP3K9P80192 1104 aa17.13■□□□□ 0.33
HLA-DQB1-202ENST00000399079 HDAC1Q13547 482 aaPredicted RBP17.13■□□□□ 0.33
HLA-DQB1-202ENST00000399079 TTF1Q15361 905 aaPredicted RBP17.13■□□□□ 0.33
HLA-DQB1-202ENST00000399079 OTUD7AQ8TE49 926 aaPredicted RBP17.13■□□□□ 0.33
HLA-DQB1-202ENST00000399079 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
HLA-DQB1-202ENST00000399079 ZKSCAN4Q969J2 545 aaPredicted RBP17.13■□□□□ 0.33
HLA-DQB1-202ENST00000399079 HOOK2Q96ED9 719 aa17.13■□□□□ 0.33
HLA-DQB1-202ENST00000399079 HAUS7Q99871 368 aa17.13■□□□□ 0.33
HLA-DQB1-202ENST00000399079 PAG1Q9NWQ8 432 aa17.13■□□□□ 0.33
HLA-DQB1-202ENST00000399079 AK9Q5TCS8 1911 aa17.13■□□□□ 0.33
HLA-DQB1-202ENST00000399079 OTOFQ9HC10 1997 aa17.13■□□□□ 0.33
HLA-DQB1-202ENST00000399079 UNCXA6NJT0 531 aa17.12■□□□□ 0.33
HLA-DQB1-202ENST00000399079 CTCFP49711 727 aaPredicted RBP17.12■□□□□ 0.33
HLA-DQB1-202ENST00000399079 AAMPQ13685 434 aa17.12■□□□□ 0.33
HLA-DQB1-202ENST00000399079 SLC9C2Q5TAH2 1124 aa17.12■□□□□ 0.33
HLA-DQB1-202ENST00000399079 COL13A1Q5TAT6 717 aaPredicted RBP17.12■□□□□ 0.33
HLA-DQB1-202ENST00000399079 DCAF15Q66K64 600 aa17.12■□□□□ 0.33
HLA-DQB1-202ENST00000399079 WNK4Q96J92 1243 aa17.12■□□□□ 0.33
HLA-DQB1-202ENST00000399079 ECHDC1Q9NTX5 307 aa17.12■□□□□ 0.33
HLA-DQB1-202ENST00000399079 ATRNL1Q5VV63 1379 aa17.12■□□□□ 0.33
HLA-DQB1-202ENST00000399079 IGSF3O75054 1194 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 MAP4K4O95819 1239 aaPredicted RBP17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 HSPA8P11142 646 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 INPP5BP32019 993 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 SLFNL1Q499Z3 407 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 ANKRD45Q5TZF3 282 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 TGFBRAP1Q8WUH2 860 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 OPTNQ96CV9 577 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 ZNF341Q9BYN7 854 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 CSADQ9Y600 493 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 DOCK2Q92608 1830 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 TRPA1O75762 1119 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 CHGBP05060 677 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 PDE6AP16499 860 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 MAPKAPK5Q8IW41 473 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 OSBPL5Q9H0X9 879 aaPredicted RBP17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 RNF186Q9NXI6 227 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 SNCAIPQ9Y6H5 919 aa17.11■□□□□ 0.33
HLA-DQB1-202ENST00000399079 NPM3O75607 178 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-202ENST00000399079 IGHDP01880 384 aa17.1■□□□□ 0.33
HLA-DQB1-202ENST00000399079 ZBTB48P10074 688 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-202ENST00000399079 PLCG2P16885 1265 aa17.1■□□□□ 0.33
HLA-DQB1-202ENST00000399079 GCC1Q96CN9 775 aa17.1■□□□□ 0.33
HLA-DQB1-202ENST00000399079 ZNF112Q9UJU3 913 aa17.1■□□□□ 0.33
HLA-DQB1-202ENST00000399079 ZNF532Q9HCE3 1301 aa17.1■□□□□ 0.33
HLA-DQB1-202ENST00000399079 TCRBV5S4A2TA0A5A2 114 aa17.09■□□□□ 0.33
HLA-DQB1-202ENST00000399079 FAM196BA6NMK8 535 aa17.09■□□□□ 0.33
HLA-DQB1-202ENST00000399079 CA12O43570 354 aa17.09■□□□□ 0.33
HLA-DQB1-202ENST00000399079 TM4SF4P48230 202 aa17.09■□□□□ 0.33
HLA-DQB1-202ENST00000399079 OTUD5Q96G74 571 aa17.09■□□□□ 0.33
HLA-DQB1-202ENST00000399079 GPATCH3Q96I76 525 aa17.09■□□□□ 0.33
HLA-DQB1-202ENST00000399079 FLT1P17948 1338 aa17.09■□□□□ 0.33
HLA-DQB1-202ENST00000399079 PHF20L1A8MW92 1017 aa17.08■□□□□ 0.32
HLA-DQB1-202ENST00000399079 REM2Q8IYK8 340 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB1-202ENST00000399079 RIOK1Q9BRS2 568 aaKnown RBP17.08■□□□□ 0.32
HLA-DQB1-202ENST00000399079 RWDD1Q9H446 243 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB1-202ENST00000399079 MAP3K10Q02779 954 aa17.07■□□□□ 0.32
HLA-DQB1-202ENST00000399079 SREBF2Q12772 1141 aa17.07■□□□□ 0.32
HLA-DQB1-202ENST00000399079 SLC4A8Q2Y0W8 1093 aa17.07■□□□□ 0.32
HLA-DQB1-202ENST00000399079 B4GALNT3Q6L9W6 998 aa17.07■□□□□ 0.32
HLA-DQB1-202ENST00000399079 SAP30BPQ9UHR5 308 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB1-202ENST00000399079 PALD1Q9ULE6 856 aa17.07■□□□□ 0.32
HLA-DQB1-202ENST00000399079 MAGEB6P1A0A0J9YX57 407 aa17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 MANSC4A6NHS7 340 aaPredicted RBP17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 SPDYE5A6NIY4 337 aa17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 ADD2P35612 726 aa17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 TMED8Q6PL24 325 aaPredicted RBP17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 PI4K2BQ8TCG2 481 aa17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 MS4A4AQ96JQ5 239 aa17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 PRDM10Q9NQV6 1147 aa17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 ZBTB47Q9UFB7 747 aaPredicted RBP17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 IRF6O14896 467 aa17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 MX1P20591 662 aa17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 USP5P45974 858 aa17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 TTC41PQ6P2S7 1318 aa17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 ERO1BQ86YB8 467 aa17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 SMC5Q8IY18 1101 aa17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 SALL3Q9BXA9 1300 aa17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 SAGE1Q9NXZ1 904 aa17.06■□□□□ 0.32
HLA-DQB1-202ENST00000399079 CDK5RAP2Q96SN8 1893 aa17.05■□□□□ 0.32
HLA-DQB1-202ENST00000399079 COL2A1P02458 1487 aaPredicted RBP17.05■□□□□ 0.32
HLA-DQB1-202ENST00000399079 IGF2BP3O00425 579 aaKnown RBP eCLIP17.05■□□□□ 0.32
HLA-DQB1-202ENST00000399079 TBC1D8O95759 1140 aa17.05■□□□□ 0.32
HLA-DQB1-202ENST00000399079 CERS3Q8IU89 383 aa17.05■□□□□ 0.32
HLA-DQB1-202ENST00000399079 LCORLQ8N3X6 602 aa17.05■□□□□ 0.32
HLA-DQB1-202ENST00000399079 PTPN18Q99952 460 aa17.05■□□□□ 0.32
HLA-DQB1-202ENST00000399079 LNPKQ9C0E8 428 aa17.05■□□□□ 0.32
HLA-DQB1-202ENST00000399079 DHX36Q9H2U1 1008 aaKnown RBP17.05■□□□□ 0.32
HLA-DQB1-202ENST00000399079 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.05■□□□□ 0.32
HLA-DQB1-202ENST00000399079 TBC1D12O60347 775 aa17.04■□□□□ 0.32
HLA-DQB1-202ENST00000399079 INHBEP58166 350 aa17.04■□□□□ 0.32
HLA-DQB1-202ENST00000399079 NOL9Q5SY16 702 aaKnown RBP17.04■□□□□ 0.32
HLA-DQB1-202ENST00000399079 IFNL1Q8IU54 200 aa17.04■□□□□ 0.32
HLA-DQB1-202ENST00000399079 ARMT1Q9H993 441 aa17.04■□□□□ 0.32
HLA-DQB1-202ENST00000399079 PI4KBQ9UBF8 816 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms