RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 FAM163AQ96GL9 167 aaPredicted RBP27.26■■□□□ 1.95
CDH23-206ENST00000398842 MTA3Q9BTC8 594 aa27.26■■□□□ 1.95
CDH23-206ENST00000398842 LY9Q9HBG7 655 aa27.26■■□□□ 1.95
CDH23-206ENST00000398842 LMBRD1Q9NUN5 540 aa27.26■■□□□ 1.95
CDH23-206ENST00000398842 GOLGA8BA8MQT2 603 aa27.25■■□□□ 1.95
CDH23-206ENST00000398842 LIFRP42702 1097 aa27.25■■□□□ 1.95
CDH23-206ENST00000398842 SGMS1Q86VZ5 419 aa27.25■■□□□ 1.95
CDH23-206ENST00000398842 MKRN1Q9UHC7 482 aaKnown RBP27.25■■□□□ 1.95
CDH23-206ENST00000398842 SNED1Q8TER0 1413 aa27.25■■□□□ 1.95
CDH23-206ENST00000398842 TCHHQ07283 1943 aa27.25■■□□□ 1.95
CDH23-206ENST00000398842 PCP11498 1178 aaKnown RBP27.25■■□□□ 1.95
CDH23-206ENST00000398842 HMGN5P82970 282 aaKnown RBP27.25■■□□□ 1.95
CDH23-206ENST00000398842 SKOR2Q2VWA4 1001 aaPredicted RBP27.25■■□□□ 1.95
CDH23-206ENST00000398842 RRP12Q5JTH9 1297 aaKnown RBP27.25■■□□□ 1.95
CDH23-206ENST00000398842 SH3RF3Q8TEJ3 882 aaPredicted RBP27.25■■□□□ 1.95
CDH23-206ENST00000398842 SENP2Q9HC62 589 aa27.25■■□□□ 1.95
CDH23-206ENST00000398842 ARPP21Q9UBL0 812 aaPredicted RBP27.25■■□□□ 1.95
CDH23-206ENST00000398842 GPR75-ASB3A0A0A6YYF3 556 aa27.24■■□□□ 1.95
CDH23-206ENST00000398842 PTPDC1A2A3K4 754 aa27.24■■□□□ 1.95
CDH23-206ENST00000398842 VPS37CA5D8V6 355 aaPredicted RBP27.24■■□□□ 1.95
CDH23-206ENST00000398842 DOK7Q18PE1 504 aa27.24■■□□□ 1.95
CDH23-206ENST00000398842 TMEM67Q5HYA8 995 aa27.24■■□□□ 1.95
CDH23-206ENST00000398842 CERS3Q8IU89 383 aa27.24■■□□□ 1.95
CDH23-206ENST00000398842 STK11IPQ8N1F8 1099 aa27.24■■□□□ 1.95
CDH23-206ENST00000398842 NOL10Q9BSC4 688 aaKnown RBP27.24■■□□□ 1.95
CDH23-206ENST00000398842 MTFR1LQ9H019 292 aa27.24■■□□□ 1.95
CDH23-206ENST00000398842 SUGT1Q9Y2Z0 365 aa27.24■■□□□ 1.95
CDH23-206ENST00000398842 DDX11Q96FC9 970 aa27.23■■□□□ 1.95
CDH23-206ENST00000398842 TOMM22Q9NS69 142 aa27.23■■□□□ 1.95
CDH23-206ENST00000398842 KIF13BQ9NQT8 1826 aa27.23■■□□□ 1.95
CDH23-206ENST00000398842 GAKO14976 1311 aa27.23■■□□□ 1.95
CDH23-206ENST00000398842 NAV1Q8NEY1 1877 aa27.23■■□□□ 1.95
CDH23-206ENST00000398842 IFIT3O14879 490 aaKnown RBP27.22■■□□□ 1.95
CDH23-206ENST00000398842 SLF2Q8IX21 1173 aa27.22■■□□□ 1.95
CDH23-206ENST00000398842 GSE1Q14687 1217 aa27.22■■□□□ 1.95
CDH23-206ENST00000398842 APOA5Q6Q788 366 aa27.22■■□□□ 1.95
CDH23-206ENST00000398842 CDC37L1Q7L3B6 337 aa27.22■■□□□ 1.95
CDH23-206ENST00000398842 ESR2Q92731 530 aa27.22■■□□□ 1.95
CDH23-206ENST00000398842 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.22■■□□□ 1.95
CDH23-206ENST00000398842 BTDP43251 543 aa27.21■■□□□ 1.95
CDH23-206ENST00000398842 CERS5Q8N5B7 392 aa27.21■■□□□ 1.95
CDH23-206ENST00000398842 ATP6V1DQ9Y5K8 247 aa27.21■■□□□ 1.95
CDH23-206ENST00000398842 DHX16O60231 1041 aaKnown RBP27.2■■□□□ 1.95
CDH23-206ENST00000398842 USP5P45974 858 aa27.2■■□□□ 1.95
CDH23-206ENST00000398842 EVX2Q03828 476 aa27.2■■□□□ 1.95
CDH23-206ENST00000398842 CC2D2BQ6DHV5 1058 aa27.2■■□□□ 1.95
CDH23-206ENST00000398842 PODNQ7Z5L7 613 aa27.2■■□□□ 1.95
CDH23-206ENST00000398842 FAM184AQ8NB25 1140 aa27.2■■□□□ 1.95
CDH23-206ENST00000398842 ZNF219Q9P2Y4 722 aaPredicted RBP27.2■■□□□ 1.95
CDH23-206ENST00000398842 PRPF40AO75400 957 aaKnown RBP27.2■■□□□ 1.94
CDH23-206ENST00000398842 SART3Q15020 963 aaKnown RBP27.2■■□□□ 1.94
CDH23-206ENST00000398842 MCM9Q9NXL9 1143 aa27.2■■□□□ 1.94
CDH23-206ENST00000398842 ZNF646O15015 1829 aaPredicted RBP27.19■■□□□ 1.94
CDH23-206ENST00000398842 ORC4O43929 436 aa27.19■■□□□ 1.94
CDH23-206ENST00000398842 CYP2D6P10635 497 aa27.19■■□□□ 1.94
CDH23-206ENST00000398842 FOXD4L6Q3SYB3 417 aaPredicted RBP27.19■■□□□ 1.94
CDH23-206ENST00000398842 FOXD4L3Q6VB84 417 aaPredicted RBP27.19■■□□□ 1.94
CDH23-206ENST00000398842 RAB11FIP4Q86YS3 637 aa27.19■■□□□ 1.94
CDH23-206ENST00000398842 KIF3AQ9Y496 699 aa27.19■■□□□ 1.94
CDH23-206ENST00000398842 DDX60LQ5H9U9 1706 aaKnown RBP27.18■■□□□ 1.94
CDH23-206ENST00000398842 G3V3G9 751 aa27.18■■□□□ 1.94
CDH23-206ENST00000398842 USP17L8P0C7I0 530 aa27.18■■□□□ 1.94
CDH23-206ENST00000398842 DCAF8Q5TAQ9 597 aa27.18■■□□□ 1.94
CDH23-206ENST00000398842 NFXL1Q6ZNB6 911 aa27.18■■□□□ 1.94
CDH23-206ENST00000398842 FBXW7Q969H0 707 aa27.18■■□□□ 1.94
CDH23-206ENST00000398842 ZKSCAN3Q9BRR0 538 aa27.18■■□□□ 1.94
CDH23-206ENST00000398842 FOCADQ5VW36 1801 aa27.18■■□□□ 1.94
CDH23-206ENST00000398842 FDPSP14324 419 aaKnown RBP27.17■■□□□ 1.94
CDH23-206ENST00000398842 PLCG2P16885 1265 aa27.17■■□□□ 1.94
CDH23-206ENST00000398842 RHBDL3P58872 404 aa27.17■■□□□ 1.94
CDH23-206ENST00000398842 WTAPQ15007 396 aa27.17■■□□□ 1.94
CDH23-206ENST00000398842 C12orf60Q5U649 245 aa27.17■■□□□ 1.94
CDH23-206ENST00000398842 TGFBRAP1Q8WUH2 860 aa27.17■■□□□ 1.94
CDH23-206ENST00000398842 NID2Q14112 1375 aa27.17■■□□□ 1.94
CDH23-206ENST00000398842 ZBTB43O43298 467 aa27.17■■□□□ 1.94
CDH23-206ENST00000398842 SLC3A2P08195 630 aaKnown RBP27.17■■□□□ 1.94
CDH23-206ENST00000398842 POLD1P28340 1107 aa27.17■■□□□ 1.94
CDH23-206ENST00000398842 METAP2P50579 478 aaKnown RBP eCLIP27.17■■□□□ 1.94
CDH23-206ENST00000398842 SEC23AQ15436 765 aa27.17■■□□□ 1.94
CDH23-206ENST00000398842 KLHL40Q2TBA0 621 aa27.17■■□□□ 1.94
CDH23-206ENST00000398842 TMTC2Q8N394 836 aa27.17■■□□□ 1.94
CDH23-206ENST00000398842 DBNDD1Q9H9R9 158 aa27.17■■□□□ 1.94
CDH23-206ENST00000398842 SCN9AQ15858 1988 aa27.16■■□□□ 1.94
CDH23-206ENST00000398842 ERICH2A1L162 156 aa27.16■■□□□ 1.94
CDH23-206ENST00000398842 CCDC69A6NI79 296 aa27.16■■□□□ 1.94
CDH23-206ENST00000398842 DAGLAQ9Y4D2 1042 aa27.16■■□□□ 1.94
CDH23-206ENST00000398842 ROBO3Q96MS0 1386 aa27.16■■□□□ 1.94
CDH23-206ENST00000398842 PRDM1O75626 825 aa27.15■■□□□ 1.94
CDH23-206ENST00000398842 TMEM87AQ8NBN3 555 aa27.15■■□□□ 1.94
CDH23-206ENST00000398842 UBAC1Q9BSL1 405 aa27.15■■□□□ 1.94
CDH23-206ENST00000398842 SLC12A7Q9Y666 1083 aa27.15■■□□□ 1.94
CDH23-206ENST00000398842 DDX49Q9Y6V7 483 aaKnown RBP27.15■■□□□ 1.94
CDH23-206ENST00000398842 KCNA3P22001 575 aa27.14■■□□□ 1.94
CDH23-206ENST00000398842 TTLL6Q8N841 843 aa27.14■■□□□ 1.94
CDH23-206ENST00000398842 MXD3Q9BW11 206 aa27.14■■□□□ 1.94
CDH23-206ENST00000398842 CPLX1O14810 134 aa27.14■■□□□ 1.93
CDH23-206ENST00000398842 RANBP6O60518 1105 aaKnown RBP27.14■■□□□ 1.93
CDH23-206ENST00000398842 CDC27P30260 824 aa27.14■■□□□ 1.93
CDH23-206ENST00000398842 MICU3Q86XE3 530 aa27.14■■□□□ 1.93
CDH23-206ENST00000398842 TEX11Q8IYF3 940 aa27.14■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms