RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 STAP2Q9UGK3 403 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 ZNF202O95125 648 aa12.21□□□□□ -0.45
CCDC40-204ENST00000397545 MNAT1P51948 309 aa12.21□□□□□ -0.45
CCDC40-204ENST00000397545 UBXN1Q04323 297 aa12.21□□□□□ -0.45
CCDC40-204ENST00000397545 POLA2Q14181 598 aa12.21□□□□□ -0.45
CCDC40-204ENST00000397545 ADCK5Q3MIX3 580 aa12.21□□□□□ -0.45
CCDC40-204ENST00000397545 CTAGE1Q96RT6 745 aa12.21□□□□□ -0.45
CCDC40-204ENST00000397545 CNNM2Q9H8M5 875 aa12.21□□□□□ -0.45
CCDC40-204ENST00000397545 NSFL1CQ9UNZ2 370 aaKnown RBP12.21□□□□□ -0.45
CCDC40-204ENST00000397545 NCOA3Q9Y6Q9 1424 aa12.21□□□□□ -0.45
CCDC40-204ENST00000397545 PRDM1O75626 825 aa12.21□□□□□ -0.45
CCDC40-204ENST00000397545 A1BGP04217 495 aa12.21□□□□□ -0.45
CCDC40-204ENST00000397545 SLC52A2Q9HAB3 445 aa12.21□□□□□ -0.45
CCDC40-204ENST00000397545 NAA16Q6N069 864 aaPredicted RBP12.21□□□□□ -0.46
CCDC40-204ENST00000397545 ATRIPQ8WXE1 791 aa12.21□□□□□ -0.46
CCDC40-204ENST00000397545 NAA15Q9BXJ9 866 aaKnown RBP12.21□□□□□ -0.46
CCDC40-204ENST00000397545 TEX13AQ9BXU3 409 aaPredicted RBP12.21□□□□□ -0.46
CCDC40-204ENST00000397545 hCG_1642624A0A1W2PR95 340 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 POLR2DO15514 142 aaKnown RBP12.2□□□□□ -0.46
CCDC40-204ENST00000397545 ZNF500O60304 480 aaPredicted RBP12.2□□□□□ -0.46
CCDC40-204ENST00000397545 MBD4O95243 580 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 PHKG2P15735 406 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 FAM98CQ17RN3 349 aaKnown RBP12.2□□□□□ -0.46
CCDC40-204ENST00000397545 LONRF3Q496Y0 759 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 SMAP1Q8IYB5 467 aaPredicted RBP12.2□□□□□ -0.46
CCDC40-204ENST00000397545 PI4K2BQ8TCG2 481 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 KCNH3Q9ULD8 1083 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 SALL3Q9BXA9 1300 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 EYA2O00167 538 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 TRMT44Q8IYL2 757 aaKnown RBP12.2□□□□□ -0.46
CCDC40-204ENST00000397545 CCDC42Q96M95 316 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 USP28Q96RU2 1077 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 RABEP2Q9H5N1 569 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 PYCARDQ9ULZ3 195 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 IRS4O14654 1257 aaPredicted RBP12.2□□□□□ -0.46
CCDC40-204ENST00000397545 KIF5AQ12840 1032 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 KBTBD3Q8NAB2 608 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 CRNKL1Q9BZJ0 848 aaKnown RBP12.2□□□□□ -0.46
CCDC40-204ENST00000397545 NRBP1Q9UHY1 535 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 ERCC3P19447 782 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 GIMAP7Q8NHV1 300 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 XPO4Q9C0E2 1151 aaKnown RBP12.2□□□□□ -0.46
CCDC40-204ENST00000397545 RMND1Q9NWS8 449 aa12.2□□□□□ -0.46
CCDC40-204ENST00000397545 GOLGA6L10A0A0M3HER8 536 aa12.19□□□□□ -0.46
CCDC40-204ENST00000397545 ZEB2O60315 1214 aa12.19□□□□□ -0.46
CCDC40-204ENST00000397545 DDB1Q16531 1140 aa12.19□□□□□ -0.46
CCDC40-204ENST00000397545 NFE2L3Q9Y4A8 694 aa12.19□□□□□ -0.46
CCDC40-204ENST00000397545 C1orf167Q5SNV9 1468 aa12.19□□□□□ -0.46
CCDC40-204ENST00000397545 GPAA1O43292 621 aa12.19□□□□□ -0.46
CCDC40-204ENST00000397545 DIS3L2Q8IYB7 885 aaKnown RBP12.19□□□□□ -0.46
CCDC40-204ENST00000397545 CEP112Q8N8E3 955 aa12.19□□□□□ -0.46
CCDC40-204ENST00000397545 IGSF22Q8N9C0 903 aa12.19□□□□□ -0.46
CCDC40-204ENST00000397545 ZNF215Q9UL58 517 aaPredicted RBP12.19□□□□□ -0.46
CCDC40-204ENST00000397545 LUC7L2Q9Y383 392 aaKnown RBP12.19□□□□□ -0.46
CCDC40-204ENST00000397545 ELP1O95163 1332 aa12.19□□□□□ -0.46
CCDC40-204ENST00000397545 TSPY3P0CV98 308 aa12.19□□□□□ -0.46
CCDC40-204ENST00000397545 TSPY8P0CW00 308 aa12.19□□□□□ -0.46
CCDC40-204ENST00000397545 CCDC152Q4G0S7 254 aa12.19□□□□□ -0.46
CCDC40-204ENST00000397545 FAM114A1Q8IWE2 563 aa12.19□□□□□ -0.46
CCDC40-204ENST00000397545 METTL22Q9BUU2 404 aaPredicted RBP12.19□□□□□ -0.46
CCDC40-204ENST00000397545 NIP7Q9Y221 180 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCDC40-204ENST00000397545 AK9Q5TCS8 1911 aa12.18□□□□□ -0.46
CCDC40-204ENST00000397545 F8W031 263 aaPredicted RBP12.18□□□□□ -0.46
CCDC40-204ENST00000397545 GCKRQ14397 625 aa12.18□□□□□ -0.46
CCDC40-204ENST00000397545 ERCC6LQ2NKX8 1250 aa12.18□□□□□ -0.46
CCDC40-204ENST00000397545 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.18□□□□□ -0.46
CCDC40-204ENST00000397545 TLR7Q9NYK1 1049 aaKnown RBP12.18□□□□□ -0.46
CCDC40-204ENST00000397545 AKR1B15C9JRZ8 316 aaPredicted RBP12.18□□□□□ -0.46
CCDC40-204ENST00000397545 BMP15O95972 392 aa12.18□□□□□ -0.46
CCDC40-204ENST00000397545 EHBP1Q8NDI1 1231 aa12.18□□□□□ -0.46
CCDC40-204ENST00000397545 HSF2BPO75031 334 aa12.18□□□□□ -0.46
CCDC40-204ENST00000397545 BAG3O95817 575 aa12.18□□□□□ -0.46
CCDC40-204ENST00000397545 MTX1Q13505 466 aa12.18□□□□□ -0.46
CCDC40-204ENST00000397545 ANKRD18AQ8IVF6 992 aa12.18□□□□□ -0.46
CCDC40-204ENST00000397545 KCNJ14Q9UNX9 436 aa12.18□□□□□ -0.46
CCDC40-204ENST00000397545 LTN1O94822 1766 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 CYP27B1O15528 508 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 KRT86O43790 486 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 TACC1O75410 805 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 NAPAP54920 295 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 CCDC122Q5T0U0 273 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 TICAM2Q86XR7 235 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 IQUBQ8NA54 791 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 HELLSQ9NRZ9 838 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 MCM9Q9NXL9 1143 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 ANGEL1Q9UNK9 670 aaKnown RBP12.17□□□□□ -0.46
CCDC40-204ENST00000397545 NFAT5O94916 1531 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 WDHD1O75717 1129 aaPredicted RBP12.17□□□□□ -0.46
CCDC40-204ENST00000397545 IGKV5-2P06315 115 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 TERF1P54274 439 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 CKAP4Q07065 602 aaKnown RBP12.17□□□□□ -0.46
CCDC40-204ENST00000397545 UBE4AQ14139 1066 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 IFT81Q8WYA0 676 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 XAGE2Q96GT9 111 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 TM6SF1Q9BZW5 370 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 ARMT1Q9H993 441 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 MAGEB6P1A0A0J9YX57 407 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 KIF20AO95235 890 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 AOX1Q06278 1338 aa12.17□□□□□ -0.46
CCDC40-204ENST00000397545 KRT40Q6A162 431 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms