RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CHGBP05060 677 aa25.63■■□□□ 1.69
TSPAN4-206ENST00000397408 ZSCAN25Q6NSZ9 544 aa25.63■■□□□ 1.69
TSPAN4-206ENST00000397408 RGMBQ6NW40 437 aa25.63■■□□□ 1.69
TSPAN4-206ENST00000397408 ZSCAN29Q8IWY8 852 aaPredicted RBP25.63■■□□□ 1.69
TSPAN4-206ENST00000397408 HOOK2Q96ED9 719 aa25.63■■□□□ 1.69
TSPAN4-206ENST00000397408 CDK5RAP2Q96SN8 1893 aa25.62■■□□□ 1.69
TSPAN4-206ENST00000397408 ECE1P42892 770 aa25.62■■□□□ 1.69
TSPAN4-206ENST00000397408 MAP3K11Q16584 847 aa25.62■■□□□ 1.69
TSPAN4-206ENST00000397408 PLEKHM2Q8IWE5 1019 aa25.62■■□□□ 1.69
TSPAN4-206ENST00000397408 TGFBRAP1Q8WUH2 860 aa25.62■■□□□ 1.69
TSPAN4-206ENST00000397408 RIOK1Q9BRS2 568 aaKnown RBP25.62■■□□□ 1.69
TSPAN4-206ENST00000397408 OSBPL5Q9H0X9 879 aaPredicted RBP25.62■■□□□ 1.69
TSPAN4-206ENST00000397408 FOCADQ5VW36 1801 aa25.61■■□□□ 1.69
TSPAN4-206ENST00000397408 USP2O75604 605 aaPredicted RBP25.61■■□□□ 1.69
TSPAN4-206ENST00000397408 IREB2P48200 963 aaKnown RBP25.61■■□□□ 1.69
TSPAN4-206ENST00000397408 ZNF157P51786 506 aaPredicted RBP25.61■■□□□ 1.69
TSPAN4-206ENST00000397408 UBE3CQ15386 1083 aa25.61■■□□□ 1.69
TSPAN4-206ENST00000397408 SH3BP5LQ7L8J4 393 aa25.61■■□□□ 1.69
TSPAN4-206ENST00000397408 CSRNP1Q96S65 589 aa25.61■■□□□ 1.69
TSPAN4-206ENST00000397408 WDR33Q9C0J8 1336 aaKnown RBP25.61■■□□□ 1.69
TSPAN4-206ENST00000397408 DCAF15Q66K64 600 aa25.6■■□□□ 1.69
TSPAN4-206ENST00000397408 MAPKAPK5Q8IW41 473 aa25.6■■□□□ 1.69
TSPAN4-206ENST00000397408 FSD1Q9BTV5 496 aa25.6■■□□□ 1.69
TSPAN4-206ENST00000397408 FLT1P17948 1338 aa25.6■■□□□ 1.69
TSPAN4-206ENST00000397408 COL2A1P02458 1487 aaPredicted RBP25.59■■□□□ 1.69
TSPAN4-206ENST00000397408 DDTLA6NHG4 134 aaPredicted RBP25.59■■□□□ 1.69
TSPAN4-206ENST00000397408 LDLRAD1Q5T700 205 aa25.59■■□□□ 1.69
TSPAN4-206ENST00000397408 OTOFQ9HC10 1997 aa25.59■■□□□ 1.69
TSPAN4-206ENST00000397408 ATRNL1Q5VV63 1379 aa25.59■■□□□ 1.69
TSPAN4-206ENST00000397408 PDE4AP27815 886 aa25.58■■□□□ 1.69
TSPAN4-206ENST00000397408 MIGA2Q7L4E1 593 aa25.58■■□□□ 1.69
TSPAN4-206ENST00000397408 OSBPL3Q9H4L5 887 aa25.58■■□□□ 1.69
TSPAN4-206ENST00000397408 MBD4O95243 580 aa25.57■■□□□ 1.68
TSPAN4-206ENST00000397408 USP5P45974 858 aa25.57■■□□□ 1.68
TSPAN4-206ENST00000397408 LCORLQ8N3X6 602 aa25.57■■□□□ 1.68
TSPAN4-206ENST00000397408 RNF113AO15541 343 aaKnown RBP25.56■■□□□ 1.68
TSPAN4-206ENST00000397408 ZFYP08048 801 aaPredicted RBP25.56■■□□□ 1.68
TSPAN4-206ENST00000397408 SLC10A3P09131 477 aa25.56■■□□□ 1.68
TSPAN4-206ENST00000397408 LRRFIP1Q32MZ4 808 aaKnown RBP25.56■■□□□ 1.68
TSPAN4-206ENST00000397408 RASAL3Q86YV0 1011 aa25.56■■□□□ 1.68
TSPAN4-206ENST00000397408 CCDC102AQ96A19 550 aa25.56■■□□□ 1.68
TSPAN4-206ENST00000397408 EVI5LQ96CN4 794 aa25.56■■□□□ 1.68
TSPAN4-206ENST00000397408 CLMNQ96JQ2 1002 aa25.56■■□□□ 1.68
TSPAN4-206ENST00000397408 ZNF341Q9BYN7 854 aa25.56■■□□□ 1.68
TSPAN4-206ENST00000397408 CRNKL1Q9BZJ0 848 aaKnown RBP25.56■■□□□ 1.68
TSPAN4-206ENST00000397408 ARMT1Q9H993 441 aa25.56■■□□□ 1.68
TSPAN4-206ENST00000397408 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.56■■□□□ 1.68
TSPAN4-206ENST00000397408 THSD7BQ9C0I4 1608 aa25.56■■□□□ 1.68
TSPAN4-206ENST00000397408 CENPQQ7L2Z9 268 aaPredicted RBP25.55■■□□□ 1.68
TSPAN4-206ENST00000397408 ANKRD13AQ8IZ07 590 aa25.55■■□□□ 1.68
TSPAN4-206ENST00000397408 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.55■■□□□ 1.681e-7■■■□□ 19.2
TSPAN4-206ENST00000397408 WRNIP1Q96S55 665 aa25.55■■□□□ 1.68
TSPAN4-206ENST00000397408 FAM155AB1AL88 458 aaPredicted RBP25.54■■□□□ 1.68
TSPAN4-206ENST00000397408 AOC2O75106 756 aa25.54■■□□□ 1.68
TSPAN4-206ENST00000397408 JMYQ8N9B5 988 aa25.54■■□□□ 1.68
TSPAN4-206ENST00000397408 APPBP2Q92624 585 aa25.54■■□□□ 1.68
TSPAN4-206ENST00000397408 AIDAQ96BJ3 306 aa25.54■■□□□ 1.68
TSPAN4-206ENST00000397408 CCDC136Q96JN2 1154 aa25.54■■□□□ 1.68
TSPAN4-206ENST00000397408 PUS7LQ9H0K6 701 aaKnown RBP25.54■■□□□ 1.68
TSPAN4-206ENST00000397408 SAP30BPQ9UHR5 308 aaKnown RBP25.54■■□□□ 1.68
TSPAN4-206ENST00000397408 TRIM6-TRIM34B2RNG4 842 aa25.54■■□□□ 1.68
TSPAN4-206ENST00000397408 NAV1Q8NEY1 1877 aa25.53■■□□□ 1.68
TSPAN4-206ENST00000397408 UNCXA6NJT0 531 aa25.53■■□□□ 1.68
TSPAN4-206ENST00000397408 SLURP2P0DP57 97 aa25.53■■□□□ 1.68
TSPAN4-206ENST00000397408 MAP3K9P80192 1104 aa25.53■■□□□ 1.68
TSPAN4-206ENST00000397408 NOGQ13253 232 aa25.53■■□□□ 1.68
TSPAN4-206ENST00000397408 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.53■■□□□ 1.68
TSPAN4-206ENST00000397408 OSBP2Q969R2 916 aa25.53■■□□□ 1.68
TSPAN4-206ENST00000397408 DHX36Q9H2U1 1008 aaKnown RBP25.53■■□□□ 1.68
TSPAN4-206ENST00000397408 PALD1Q9ULE6 856 aa25.53■■□□□ 1.68
TSPAN4-206ENST00000397408 PCNTO95613 3336 aa25.52■■□□□ 1.68
TSPAN4-206ENST00000397408 MYH1P12882 1939 aa25.52■■□□□ 1.68
TSPAN4-206ENST00000397408 VGLL4Q14135 290 aa25.52■■□□□ 1.68
TSPAN4-206ENST00000397408 SDR42E1Q8WUS8 393 aa25.52■■□□□ 1.68
TSPAN4-206ENST00000397408 SLC10A4Q96EP9 437 aa25.52■■□□□ 1.68
TSPAN4-206ENST00000397408 CSADQ9Y600 493 aa25.52■■□□□ 1.68
TSPAN4-206ENST00000397408 DDX60LQ5H9U9 1706 aaKnown RBP25.51■■□□□ 1.67
TSPAN4-206ENST00000397408 SIPA1L1O43166 1804 aa25.51■■□□□ 1.67
TSPAN4-206ENST00000397408 SLC4A8Q2Y0W8 1093 aa25.51■■□□□ 1.67
TSPAN4-206ENST00000397408 RILPL2Q969X0 211 aa25.51■■□□□ 1.67
TSPAN4-206ENST00000397408 ELP3Q9H9T3 547 aa25.51■■□□□ 1.67
TSPAN4-206ENST00000397408 FAM196BA6NMK8 535 aa25.5■■□□□ 1.67
TSPAN4-206ENST00000397408 PRKAB2O43741 272 aa25.5■■□□□ 1.67
TSPAN4-206ENST00000397408 INPP5BP32019 993 aa25.5■■□□□ 1.67
TSPAN4-206ENST00000397408 ZKSCAN4Q969J2 545 aaPredicted RBP25.5■■□□□ 1.67
TSPAN4-206ENST00000397408 ZIC5Q96T25 663 aa25.5■■□□□ 1.67
TSPAN4-206ENST00000397408 PI4KBQ9UBF8 816 aa25.5■■□□□ 1.67
TSPAN4-206ENST00000397408 M0R2C6 588 aa25.49■■□□□ 1.67
TSPAN4-206ENST00000397408 HLA-DOAP06340 250 aa25.49■■□□□ 1.67
TSPAN4-206ENST00000397408 MAP2K2P36507 400 aa25.49■■□□□ 1.67
TSPAN4-206ENST00000397408 MAP3K10Q02779 954 aa25.49■■□□□ 1.67
TSPAN4-206ENST00000397408 MKRN3Q13064 507 aaKnown RBP25.49■■□□□ 1.67
TSPAN4-206ENST00000397408 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.49■■□□□ 1.671e-7■■■■■ 39.7
TSPAN4-206ENST00000397408 ZNF112Q9UJU3 913 aa25.49■■□□□ 1.67
TSPAN4-206ENST00000397408 TBC1D12O60347 775 aa25.48■■□□□ 1.67
TSPAN4-206ENST00000397408 ZMYM1Q5SVZ6 1142 aa25.48■■□□□ 1.67
TSPAN4-206ENST00000397408 DCP1AQ9NPI6 582 aaPredicted RBP25.48■■□□□ 1.67
TSPAN4-206ENST00000397408 SNCAIPQ9Y6H5 919 aa25.48■■□□□ 1.67
TSPAN4-206ENST00000397408 SLC4A4Q9Y6R1 1079 aa25.48■■□□□ 1.67
TSPAN4-206ENST00000397408 GPAA1O43292 621 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms