RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 PLEKHH1Q9ULM0 1364 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 KRT2P35908 639 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 RAP1GDS1P52306 607 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 TRAF1Q13077 416 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 CCDC152Q4G0S7 254 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 TAOK1Q7L7X3 1001 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 HAUS8Q9BT25 410 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 ANXA1P04083 346 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 NR1H4Q96RI1 486 aaPredicted RBP13.73□□□□□ -0.21
SMU1-201ENST00000397149 RASSF4Q9H2L5 321 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 SMYD2Q9NRG4 433 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 SCYL2Q6P3W7 929 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 ARHGAP24Q8N264 748 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 RBSNQ9H1K0 784 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 ST7Q9NRC1 585 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 MCM9Q9NXL9 1143 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 TBC1D7Q9P0N9 293 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 STK25O00506 426 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 DTHD1Q6ZMT9 781 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 TTC30AQ86WT1 665 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 MRPS27Q92552 414 aaKnown RBP13.73□□□□□ -0.21
SMU1-201ENST00000397149 RTL1A6NKG5 1358 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 INPP5BP32019 993 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 BRD3Q15059 726 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 PPP4R1Q8TF05 950 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 RNF8O76064 485 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 DACT1Q9NYF0 836 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 SCHIP1Q9P0W5 487 aaPredicted RBP13.73□□□□□ -0.21
SMU1-201ENST00000397149 TRIM35Q9UPQ4 493 aa13.73□□□□□ -0.21
SMU1-201ENST00000397149 SYNJ2BP-COX16A0A087WUM0 186 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 FRMD3A2A2Y4 597 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 PTPDC1A2A3K4 754 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 ACTN4O43707 911 aaKnown RBP13.72□□□□□ -0.21
SMU1-201ENST00000397149 NPR1P16066 1061 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 LETM2Q2VYF4 491 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 HDXQ7Z353 690 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 MICAL1Q8TDZ2 1067 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 VPS16Q9H269 839 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 ZSCAN16Q9H4T2 348 aaPredicted RBP13.72□□□□□ -0.21
SMU1-201ENST00000397149 KIF9Q9HAQ2 790 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 COX16Q9P0S2 106 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 MAGED2Q9UNF1 606 aaPredicted RBP13.72□□□□□ -0.21
SMU1-201ENST00000397149 MAGEB6P1A0A0J9YX57 407 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 MMEL1Q495T6 779 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 SDCCAG3Q96C92 435 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 NOC4LQ9BVI4 516 aaKnown RBP13.72□□□□□ -0.21
SMU1-201ENST00000397149 CARD10Q9BWT7 1032 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 MROH2BQ7Z745 1585 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 TRIM75PA6NK02 468 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 PPP2R3AQ06190 1150 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 RAD51AP2Q09MP3 1159 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 C8orf74Q6P047 294 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 KCNG4Q8TDN1 519 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 PRIMPOLQ96LW4 560 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 PRPF6O94906 941 aaKnown RBP13.72□□□□□ -0.21
SMU1-201ENST00000397149 TMPOP42166 694 aaKnown RBP13.72□□□□□ -0.21
SMU1-201ENST00000397149 BRDTQ58F21 947 aaPredicted RBP13.72□□□□□ -0.21
SMU1-201ENST00000397149 ECHDC1Q9NTX5 307 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 GIGYF1O75420 1035 aaPredicted RBP13.72□□□□□ -0.21
SMU1-201ENST00000397149 TSGA10Q9BZW7 698 aa13.72□□□□□ -0.21
SMU1-201ENST00000397149 RYBPQ8N488 228 aaPredicted RBP13.71□□□□□ -0.21
SMU1-201ENST00000397149 FGD4Q96M96 766 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 HAUS2Q9NVX0 235 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 IVNS1ABPQ9Y6Y0 642 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 SERPINB6P35237 376 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 PEX19P40855 299 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 SMTNP53814 917 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 TBCCQ15814 346 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 M0QZ92 97 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 NOX5Q96PH1 765 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 KRT82Q9NSB4 513 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 VWA3AA6NCI4 1184 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 ZNF174Q15697 407 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 ASIC2Q16515 512 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 WHAMMP3Q1A5X7 153 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 B4GALNT4Q76KP1 1039 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 UBL4BQ8N7F7 174 aa13.71□□□□□ -0.21
SMU1-201ENST00000397149 GNGT2O14610 69 aa13.71□□□□□ -0.22
SMU1-201ENST00000397149 USP48Q86UV5 1035 aa13.71□□□□□ -0.22
SMU1-201ENST00000397149 RPL13P26373 211 aaKnown RBP13.71□□□□□ -0.22
SMU1-201ENST00000397149 PDCD2Q16342 344 aaPredicted RBP13.71□□□□□ -0.22
SMU1-201ENST00000397149 MYSM1Q5VVJ2 828 aa13.71□□□□□ -0.22
SMU1-201ENST00000397149 CCDC105Q8IYK2 499 aa13.71□□□□□ -0.22
SMU1-201ENST00000397149 CDC26Q8NHZ8 85 aa13.71□□□□□ -0.22
SMU1-201ENST00000397149 PICK1Q9NRD5 415 aa13.71□□□□□ -0.22
SMU1-201ENST00000397149 PTPRGP23470 1445 aa13.71□□□□□ -0.22
SMU1-201ENST00000397149 GNAQP50148 359 aa13.7□□□□□ -0.22
SMU1-201ENST00000397149 LGSNQ5TDP6 509 aa13.7□□□□□ -0.22
SMU1-201ENST00000397149 ZNF644Q9H582 1327 aaPredicted RBP13.7□□□□□ -0.22
SMU1-201ENST00000397149 VGLL3A8MV65 326 aa13.7□□□□□ -0.22
SMU1-201ENST00000397149 LRMPQ12912 555 aa13.7□□□□□ -0.22
SMU1-201ENST00000397149 PTPROQ16827 1216 aa13.7□□□□□ -0.22
SMU1-201ENST00000397149 CNGA4Q8IV77 575 aa13.7□□□□□ -0.22
SMU1-201ENST00000397149 ZC3H12CQ9C0D7 883 aaKnown RBP13.7□□□□□ -0.22
SMU1-201ENST00000397149 TMOD4Q9NZQ9 345 aa13.7□□□□□ -0.22
SMU1-201ENST00000397149 CTTNBP2NLQ9P2B4 639 aa13.7□□□□□ -0.22
SMU1-201ENST00000397149 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
SMU1-201ENST00000397149 PGBD1Q96JS3 809 aa13.7□□□□□ -0.22
SMU1-201ENST00000397149 NSFL1CQ9UNZ2 370 aaKnown RBP13.7□□□□□ -0.22
SMU1-201ENST00000397149 ZSCAN22P10073 491 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms