RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 APPBP2Q92624 585 aa15.35■□□□□ 0.05
TRIM40-207ENST00000396581 EFCAB8A8MWE9 144 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 CYP2C19P33261 490 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 UBASH3AP57075 661 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 SHC4Q6S5L8 630 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 DPF2Q92785 391 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 MAP3K14Q99558 947 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 UBXN6Q9BZV1 441 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.34■□□□□ 0.05
TRIM40-207ENST00000396581 ST7Q9NRC1 585 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 GJB4Q9NTQ9 266 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 DNAI1Q9UI46 699 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 ZMYM6O95789 1325 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 CPLX1O14810 134 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 TPM1P09493 284 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 RESP18Q5W5W9 173 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 NLRP10Q86W26 655 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 HOMER1Q86YM7 354 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 JMYQ8N9B5 988 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 PLA2G12BQ9BX93 195 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 ARGLU1Q9NWB6 273 aaPredicted RBP15.34■□□□□ 0.05
TRIM40-207ENST00000396581 TBC1D2BQ9UPU7 963 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 PARP3Q9Y6F1 533 aa15.34■□□□□ 0.05
TRIM40-207ENST00000396581 ZNF831Q5JPB2 1677 aa15.33■□□□□ 0.04
TRIM40-207ENST00000396581 PTF1AQ7RTS3 328 aa15.33■□□□□ 0.04
TRIM40-207ENST00000396581 UBXN4Q92575 508 aa15.33■□□□□ 0.04
TRIM40-207ENST00000396581 MPHOSPH8Q99549 860 aa15.33■□□□□ 0.04
TRIM40-207ENST00000396581 NOL10Q9BSC4 688 aaKnown RBP15.33■□□□□ 0.04
TRIM40-207ENST00000396581 VWA3AA6NCI4 1184 aa15.32■□□□□ 0.04
TRIM40-207ENST00000396581 ARHGAP6O43182 974 aa15.32■□□□□ 0.04
TRIM40-207ENST00000396581 HAND2P61296 217 aa15.32■□□□□ 0.04
TRIM40-207ENST00000396581 TBX2Q13207 712 aaPredicted RBP15.32■□□□□ 0.04
TRIM40-207ENST00000396581 CCDC158Q5M9N0 1113 aa15.32■□□□□ 0.04
TRIM40-207ENST00000396581 NPHP1O15259 732 aa15.32■□□□□ 0.04
TRIM40-207ENST00000396581 ZSCAN12O43309 604 aa15.32■□□□□ 0.04
TRIM40-207ENST00000396581 METTL16Q86W50 562 aaKnown RBP15.32■□□□□ 0.04
TRIM40-207ENST00000396581 VPS37DQ86XT2 251 aa15.32■□□□□ 0.04
TRIM40-207ENST00000396581 ZNF34Q8IZ26 560 aa15.32■□□□□ 0.04
TRIM40-207ENST00000396581 ZNF594Q96JF6 807 aaPredicted RBP15.32■□□□□ 0.04
TRIM40-207ENST00000396581 PUS3Q9BZE2 481 aaKnown RBP15.32■□□□□ 0.04
TRIM40-207ENST00000396581 CEP126Q9P2H0 1117 aa15.32■□□□□ 0.04
TRIM40-207ENST00000396581 AKAP2Q9Y2D5 859 aa15.32■□□□□ 0.04
TRIM40-207ENST00000396581 RREB1Q92766 1687 aa15.32■□□□□ 0.04
TRIM40-207ENST00000396581 MYH14Q7Z406 1995 aaKnown RBP15.32■□□□□ 0.04
TRIM40-207ENST00000396581 CDHR2Q9BYE9 1310 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 GOLGA6L9A6NEM1 432 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 SERPINC1P01008 464 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 MARCKSP29966 332 aaPredicted RBP15.31■□□□□ 0.04
TRIM40-207ENST00000396581 FKBP4Q02790 459 aaKnown RBP eCLIP15.31■□□□□ 0.04
TRIM40-207ENST00000396581 TMCO3Q6UWJ1 677 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 RALYLQ86SE5 291 aaKnown RBP15.31■□□□□ 0.04
TRIM40-207ENST00000396581 SEPT12Q8IYM1 358 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 FAM89AQ96GI7 184 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 PUS7LQ9H0K6 701 aaKnown RBP15.31■□□□□ 0.04
TRIM40-207ENST00000396581 QTRT2Q9H974 415 aaKnown RBP15.31■□□□□ 0.04
TRIM40-207ENST00000396581 INTS13Q9NVM9 706 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 ZNF213O14771 459 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 CUTAO60888 179 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 CDKL5O76039 1030 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 TOP1P11387 765 aaKnown RBP15.31■□□□□ 0.04
TRIM40-207ENST00000396581 GPTP24298 496 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 CFAP100Q494V2 611 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 FOXP4Q8IVH2 680 aaPredicted RBP15.31■□□□□ 0.04
TRIM40-207ENST00000396581 XAGE2Q96GT9 111 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 ALG1Q9BT22 464 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 UTP14AQ9BVJ6 771 aaKnown RBP15.31■□□□□ 0.04
TRIM40-207ENST00000396581 NBPF3Q9H094 633 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 CALCOCO1Q9P1Z2 691 aa15.31■□□□□ 0.04
TRIM40-207ENST00000396581 ANGEL1Q9UNK9 670 aaKnown RBP15.31■□□□□ 0.04
TRIM40-207ENST00000396581 CSF1RP07333 972 aa15.3■□□□□ 0.04
TRIM40-207ENST00000396581 MAP3K9P80192 1104 aa15.3■□□□□ 0.04
TRIM40-207ENST00000396581 MDM2Q00987 491 aaPredicted RBP15.3■□□□□ 0.04
TRIM40-207ENST00000396581 TTC39AQ5SRH9 613 aa15.3■□□□□ 0.04
TRIM40-207ENST00000396581 KRT40Q6A162 431 aa15.3■□□□□ 0.04
TRIM40-207ENST00000396581 KRBA2Q6ZNG9 492 aa15.3■□□□□ 0.04
TRIM40-207ENST00000396581 SH2B2O14492 632 aaPredicted RBP15.29■□□□□ 0.04
TRIM40-207ENST00000396581 CAMTA2O94983 1202 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 PNOCQ13519 176 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 WASHC4Q2M389 1173 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 FAM182BQ5T319 152 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 NT5DC1Q5TFE4 455 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 LINC00116Q8NCU8 138 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 MNS1Q8NEH6 495 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.29■□□□□ 0.04
TRIM40-207ENST00000396581 PPP2R2CQ9Y2T4 447 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 TMEM232C9JQI7 657 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 GPAA1O43292 621 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 STX10O60499 249 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 URI1O94763 535 aaPredicted RBP15.29■□□□□ 0.04
TRIM40-207ENST00000396581 ZNF18P17022 549 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 BMP6P22004 513 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 ADORA1P30542 326 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 SCARF1Q14162 830 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 NTRK3Q16288 839 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 CCDC102BQ68D86 513 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 ISM2Q6H9L7 571 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 OLFM4Q6UX06 510 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 AIFM3Q96NN9 605 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 CARD6Q9BX69 1037 aa15.29■□□□□ 0.04
TRIM40-207ENST00000396581 FANCLQ9NW38 375 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms