RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 HNRNPUQ00839 825 aaKnown RBP eCLIP20.13■□□□□ 0.81
DDR1-229ENST00000396342 RAET1EQ8TD07 263 aa20.13■□□□□ 0.81
DDR1-229ENST00000396342 TRIM34Q9BYJ4 488 aa20.13■□□□□ 0.81
DDR1-229ENST00000396342 BIN2Q9UBW5 565 aaPredicted RBP20.13■□□□□ 0.81
DDR1-229ENST00000396342 KCNH4Q9UQ05 1017 aa20.13■□□□□ 0.81
DDR1-229ENST00000396342 PTCH2Q9Y6C5 1203 aa20.13■□□□□ 0.81
DDR1-229ENST00000396342 CTNND1O60716 968 aaKnown RBP20.12■□□□□ 0.81
DDR1-229ENST00000396342 MECOMQ03112 1051 aa20.12■□□□□ 0.81
DDR1-229ENST00000396342 TTC39AQ5SRH9 613 aa20.12■□□□□ 0.81
DDR1-229ENST00000396342 GADL1Q6ZQY3 521 aa20.12■□□□□ 0.81
DDR1-229ENST00000396342 CPA4Q9UI42 421 aa20.12■□□□□ 0.81
DDR1-229ENST00000396342 BCAR3O75815 825 aa20.11■□□□□ 0.81
DDR1-229ENST00000396342 PLCG2P16885 1265 aa20.11■□□□□ 0.81
DDR1-229ENST00000396342 PSMC4P43686 418 aa20.11■□□□□ 0.81
DDR1-229ENST00000396342 SMCR8Q8TEV9 937 aaPredicted RBP20.11■□□□□ 0.81
DDR1-229ENST00000396342 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.11■□□□□ 0.81
DDR1-229ENST00000396342 FCGRTP55899 365 aa20.1■□□□□ 0.81
DDR1-229ENST00000396342 ZNF333Q96JL9 665 aa20.1■□□□□ 0.81
DDR1-229ENST00000396342 GPR75-ASB3A0A0A6YYF3 556 aa20.09■□□□□ 0.81
DDR1-229ENST00000396342 ECM2O94769 699 aaPredicted RBP20.09■□□□□ 0.81
DDR1-229ENST00000396342 ITPRIPQ8IWB1 547 aa20.09■□□□□ 0.81
DDR1-229ENST00000396342 NKX2-3Q8TAU0 364 aa20.09■□□□□ 0.81
DDR1-229ENST00000396342 TRIM47Q96LD4 638 aa20.09■□□□□ 0.81
DDR1-229ENST00000396342 TBC1D2Q9BYX2 928 aa20.09■□□□□ 0.81
DDR1-229ENST00000396342 HMG20BQ9P0W2 317 aa20.09■□□□□ 0.81
DDR1-229ENST00000396342 PNMA3Q9UL41 463 aa20.09■□□□□ 0.81
DDR1-229ENST00000396342 POTEFA5A3E0 1075 aa20.08■□□□□ 0.81
DDR1-229ENST00000396342 NPM3O75607 178 aaKnown RBP20.08■□□□□ 0.81
DDR1-229ENST00000396342 SURF6O75683 361 aaKnown RBP20.08■□□□□ 0.81
DDR1-229ENST00000396342 MYCP01106 439 aaPredicted RBP20.08■□□□□ 0.81
DDR1-229ENST00000396342 PTPRAP18433 802 aa20.08■□□□□ 0.81
DDR1-229ENST00000396342 UBXN2AP68543 259 aa20.08■□□□□ 0.81
DDR1-229ENST00000396342 PABPC4Q13310 644 aaKnown RBP eCLIP20.08■□□□□ 0.81
DDR1-229ENST00000396342 C17orf99Q6UX52 265 aa20.08■□□□□ 0.81
DDR1-229ENST00000396342 ZFPM1Q8IX07 1006 aa20.08■□□□□ 0.81
DDR1-229ENST00000396342 TEX11Q8IYF3 940 aa20.08■□□□□ 0.81
DDR1-229ENST00000396342 GPR108Q9NPR9 543 aa20.08■□□□□ 0.81
DDR1-229ENST00000396342 SRRDQ9UH36 339 aa20.08■□□□□ 0.81
DDR1-229ENST00000396342 IGSF3O75054 1194 aa20.07■□□□□ 0.8
DDR1-229ENST00000396342 ARID4AP29374 1257 aaPredicted RBP20.07■□□□□ 0.8
DDR1-229ENST00000396342 NAA16Q6N069 864 aaPredicted RBP20.07■□□□□ 0.8
DDR1-229ENST00000396342 TMEM57Q8N5G2 664 aa20.07■□□□□ 0.8
DDR1-229ENST00000396342 SLC45A1Q9Y2W3 748 aa20.07■□□□□ 0.8
DDR1-229ENST00000396342 PNMA6EA0A0J9YXQ4 647 aa20.06■□□□□ 0.8
DDR1-229ENST00000396342 TRIM75PA6NK02 468 aa20.06■□□□□ 0.8
DDR1-229ENST00000396342 TBC1D12O60347 775 aa20.06■□□□□ 0.8
DDR1-229ENST00000396342 MS4A1P11836 297 aa20.06■□□□□ 0.8
DDR1-229ENST00000396342 EN2P19622 333 aaPredicted RBP20.06■□□□□ 0.8
DDR1-229ENST00000396342 NSUN4Q96CB9 384 aaKnown RBP20.06■□□□□ 0.8
DDR1-229ENST00000396342 OSBPL5Q9H0X9 879 aaPredicted RBP20.06■□□□□ 0.8
DDR1-229ENST00000396342 AS3MTQ9HBK9 375 aa20.06■□□□□ 0.8
DDR1-229ENST00000396342 MYPNQ86TC9 1320 aa20.05■□□□□ 0.8
DDR1-229ENST00000396342 A0A0G2JLL6 359 aaPredicted RBP20.05■□□□□ 0.8
DDR1-229ENST00000396342 DDTLA6NHG4 134 aaPredicted RBP20.05■□□□□ 0.8
DDR1-229ENST00000396342 ATP8B2P98198 1209 aa20.05■□□□□ 0.8
DDR1-229ENST00000396342 TBC1D9Q6ZT07 1266 aa20.05■□□□□ 0.8
DDR1-229ENST00000396342 PRRT2Q7Z6L0 340 aaPredicted RBP20.05■□□□□ 0.8
DDR1-229ENST00000396342 SH3TC2Q8TF17 1288 aa20.05■□□□□ 0.8
DDR1-229ENST00000396342 ARHGAP39Q9C0H5 1083 aa20.05■□□□□ 0.8
DDR1-229ENST00000396342 DHX36Q9H2U1 1008 aaKnown RBP20.05■□□□□ 0.8
DDR1-229ENST00000396342 PDE4DIPQ5VU43 2346 aa20.05■□□□□ 0.8
DDR1-229ENST00000396342 PHF20L1A8MW92 1017 aa20.04■□□□□ 0.8
DDR1-229ENST00000396342 GRK4P32298 578 aa20.04■□□□□ 0.8
DDR1-229ENST00000396342 TNNI3KQ59H18 835 aa20.04■□□□□ 0.8
DDR1-229ENST00000396342 CERS3Q8IU89 383 aa20.04■□□□□ 0.8
DDR1-229ENST00000396342 CRACR2BQ8N4Y2 399 aaPredicted RBP20.04■□□□□ 0.8
DDR1-229ENST00000396342 HERC5Q9UII4 1024 aaKnown RBP20.04■□□□□ 0.8
DDR1-229ENST00000396342 AFG3L2Q9Y4W6 797 aa20.04■□□□□ 0.8
DDR1-229ENST00000396342 FPGT-TNNI3KV9GXZ4 949 aa20.04■□□□□ 0.8
DDR1-229ENST00000396342 OTOFQ9HC10 1997 aa20.03■□□□□ 0.8
DDR1-229ENST00000396342 CYP2C8P10632 490 aa20.03■□□□□ 0.8
DDR1-229ENST00000396342 MAP3K10Q02779 954 aa20.03■□□□□ 0.8
DDR1-229ENST00000396342 ERC1Q8IUD2 1116 aa20.03■□□□□ 0.8
DDR1-229ENST00000396342 COA7Q96BR5 231 aa20.03■□□□□ 0.8
DDR1-229ENST00000396342 DDX4Q9NQI0 724 aaKnown RBP20.03■□□□□ 0.8
DDR1-229ENST00000396342 PI4KBQ9UBF8 816 aa20.03■□□□□ 0.8
DDR1-229ENST00000396342 TNPO2O14787 897 aaKnown RBP20.02■□□□□ 0.8
DDR1-229ENST00000396342 HLA-DOAP06340 250 aa20.02■□□□□ 0.8
DDR1-229ENST00000396342 OSBPP22059 807 aa20.02■□□□□ 0.8
DDR1-229ENST00000396342 MCAMP43121 646 aa20.02■□□□□ 0.8
DDR1-229ENST00000396342 HSP90AB4PQ58FF6 505 aa20.02■□□□□ 0.8
DDR1-229ENST00000396342 DIEXFQ68CQ4 756 aaKnown RBP20.02■□□□□ 0.8
DDR1-229ENST00000396342 SLAIN1Q8ND83 568 aa20.02■□□□□ 0.8
DDR1-229ENST00000396342 SNRKQ9NRH2 765 aa20.02■□□□□ 0.8
DDR1-229ENST00000396342 PCDH10Q9P2E7 1040 aa20.02■□□□□ 0.8
DDR1-229ENST00000396342 AGTPBP1Q9UPW5 1226 aa20.02■□□□□ 0.8
DDR1-229ENST00000396342 ATRNL1Q5VV63 1379 aa20.01■□□□□ 0.79
DDR1-229ENST00000396342 USP17L5A8MUK1 530 aa20.01■□□□□ 0.79
DDR1-229ENST00000396342 RHBDL3P58872 404 aa20.01■□□□□ 0.79
DDR1-229ENST00000396342 PI16Q6UXB8 463 aa20.01■□□□□ 0.79
DDR1-229ENST00000396342 SH3BP5LQ7L8J4 393 aa20.01■□□□□ 0.79
DDR1-229ENST00000396342 PROCA1Q8NCQ7 364 aaPredicted RBP20.01■□□□□ 0.79
DDR1-229ENST00000396342 ZNF280CQ8ND82 737 aa20.01■□□□□ 0.79
DDR1-229ENST00000396342 SSH3Q8TE77 659 aa20.01■□□□□ 0.79
DDR1-229ENST00000396342 CHMP4BQ9H444 224 aaKnown RBP20.01■□□□□ 0.79
DDR1-229ENST00000396342 TMOD4Q9NZQ9 345 aa20.01■□□□□ 0.79
DDR1-229ENST00000396342 MYH13Q9UKX3 1938 aa20■□□□□ 0.79
DDR1-229ENST00000396342 CAPN2P17655 700 aa20■□□□□ 0.79
DDR1-229ENST00000396342 POLA2Q14181 598 aa20■□□□□ 0.79
DDR1-229ENST00000396342 GPAT2Q6NUI2 795 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms