RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 PLCG2P16885 1265 aa20.03■□□□□ 0.8
CXCL1-201ENST00000395761 PDE4AP27815 886 aa20.03■□□□□ 0.8
CXCL1-201ENST00000395761 MIGA2Q7L4E1 593 aa20.03■□□□□ 0.8
CXCL1-201ENST00000395761 ARMC9Q7Z3E5 817 aa20.03■□□□□ 0.8
CXCL1-201ENST00000395761 TGFBRAP1Q8WUH2 860 aa20.03■□□□□ 0.8
CXCL1-201ENST00000395761 CCDC136Q96JN2 1154 aa20.03■□□□□ 0.8
CXCL1-201ENST00000395761 CAPNS2Q96L46 248 aa20.03■□□□□ 0.8
CXCL1-201ENST00000395761 RPAP1Q9BWH6 1393 aaPredicted RBP20.03■□□□□ 0.8
CXCL1-201ENST00000395761 MAGEB6P1A0A0J9YX57 407 aa20.02■□□□□ 0.8
CXCL1-201ENST00000395761 NPM3O75607 178 aaKnown RBP20.02■□□□□ 0.8
CXCL1-201ENST00000395761 MAP3K11Q16584 847 aa20.02■□□□□ 0.8
CXCL1-201ENST00000395761 LDLRAD1Q5T700 205 aa20.02■□□□□ 0.8
CXCL1-201ENST00000395761 RGMBQ6NW40 437 aa20.02■□□□□ 0.8
CXCL1-201ENST00000395761 WDR33Q9C0J8 1336 aaKnown RBP20.02■□□□□ 0.79
CXCL1-201ENST00000395761 SLURP2P0DP57 97 aa20.01■□□□□ 0.79
CXCL1-201ENST00000395761 ZNF157P51786 506 aaPredicted RBP20.01■□□□□ 0.79
CXCL1-201ENST00000395761 UBE3CQ15386 1083 aa20.01■□□□□ 0.79
CXCL1-201ENST00000395761 MAPKAPK5Q8IW41 473 aa20.01■□□□□ 0.79
CXCL1-201ENST00000395761 ZSCAN25Q6NSZ9 544 aa20■□□□□ 0.79
CXCL1-201ENST00000395761 ZSCAN29Q8IWY8 852 aaPredicted RBP20■□□□□ 0.79
CXCL1-201ENST00000395761 LCORLQ8N3X6 602 aa20■□□□□ 0.79
CXCL1-201ENST00000395761 CLMNQ96JQ2 1002 aa20■□□□□ 0.79
CXCL1-201ENST00000395761 OSBPL5Q9H0X9 879 aaPredicted RBP20■□□□□ 0.79
CXCL1-201ENST00000395761 OSBPL3Q9H4L5 887 aa20■□□□□ 0.79
CXCL1-201ENST00000395761 ARMT1Q9H993 441 aa20■□□□□ 0.79
CXCL1-201ENST00000395761 ZBTB4Q9P1Z0 1013 aaPredicted RBP20■□□□□ 0.79
CXCL1-201ENST00000395761 FAM155AB1AL88 458 aaPredicted RBP19.99■□□□□ 0.79
CXCL1-201ENST00000395761 RNF113AO15541 343 aaKnown RBP19.99■□□□□ 0.79
CXCL1-201ENST00000395761 AOC2O75106 756 aa19.99■□□□□ 0.79
CXCL1-201ENST00000395761 IREB2P48200 963 aaKnown RBP19.99■□□□□ 0.79
CXCL1-201ENST00000395761 CSRNP1Q96S65 589 aa19.99■□□□□ 0.79
CXCL1-201ENST00000395761 FSD1Q9BTV5 496 aa19.99■□□□□ 0.79
CXCL1-201ENST00000395761 PUS7LQ9H0K6 701 aaKnown RBP19.99■□□□□ 0.79
CXCL1-201ENST00000395761 FLT1P17948 1338 aa19.99■□□□□ 0.79
CXCL1-201ENST00000395761 ATRNL1Q5VV63 1379 aa19.98■□□□□ 0.79
CXCL1-201ENST00000395761 MBD4O95243 580 aa19.98■□□□□ 0.79
CXCL1-201ENST00000395761 ECE1P42892 770 aa19.98■□□□□ 0.79
CXCL1-201ENST00000395761 CERS3Q8IU89 383 aa19.98■□□□□ 0.79
CXCL1-201ENST00000395761 HOOK2Q96ED9 719 aa19.98■□□□□ 0.79
CXCL1-201ENST00000395761 ZIC5Q96T25 663 aa19.98■□□□□ 0.79
CXCL1-201ENST00000395761 SAP30BPQ9UHR5 308 aaKnown RBP19.98■□□□□ 0.79
CXCL1-201ENST00000395761 PRKAB2O43741 272 aa19.97■□□□□ 0.79
CXCL1-201ENST00000395761 USP5P45974 858 aa19.97■□□□□ 0.79
CXCL1-201ENST00000395761 DCAF15Q66K64 600 aa19.97■□□□□ 0.79
CXCL1-201ENST00000395761 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.97■□□□□ 0.79
CXCL1-201ENST00000395761 CENPQQ7L2Z9 268 aaPredicted RBP19.97■□□□□ 0.79
CXCL1-201ENST00000395761 RASAL3Q86YV0 1011 aa19.97■□□□□ 0.79
CXCL1-201ENST00000395761 JMYQ8N9B5 988 aa19.97■□□□□ 0.79
CXCL1-201ENST00000395761 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.97■□□□□ 0.79
CXCL1-201ENST00000395761 OSBP2Q969R2 916 aa19.97■□□□□ 0.79
CXCL1-201ENST00000395761 CCDC102AQ96A19 550 aa19.97■□□□□ 0.79
CXCL1-201ENST00000395761 EVI5LQ96CN4 794 aa19.97■□□□□ 0.79
CXCL1-201ENST00000395761 SLC10A3P09131 477 aa19.96■□□□□ 0.79
CXCL1-201ENST00000395761 MAP3K9P80192 1104 aa19.96■□□□□ 0.79
CXCL1-201ENST00000395761 ANKRD13AQ8IZ07 590 aa19.96■□□□□ 0.79
CXCL1-201ENST00000395761 SLC10A4Q96EP9 437 aa19.96■□□□□ 0.79
CXCL1-201ENST00000395761 ZNF341Q9BYN7 854 aa19.96■□□□□ 0.79
CXCL1-201ENST00000395761 CRNKL1Q9BZJ0 848 aaKnown RBP19.96■□□□□ 0.79
CXCL1-201ENST00000395761 PALD1Q9ULE6 856 aa19.96■□□□□ 0.79
CXCL1-201ENST00000395761 CDK5RAP2Q96SN8 1893 aa19.95■□□□□ 0.78
CXCL1-201ENST00000395761 TRIM6-TRIM34B2RNG4 842 aa19.95■□□□□ 0.78
CXCL1-201ENST00000395761 ZFYP08048 801 aaPredicted RBP19.95■□□□□ 0.78
CXCL1-201ENST00000395761 MAP3K10Q02779 954 aa19.95■□□□□ 0.78
CXCL1-201ENST00000395761 SLC4A8Q2Y0W8 1093 aa19.95■□□□□ 0.78
CXCL1-201ENST00000395761 SDR42E1Q8WUS8 393 aa19.95■□□□□ 0.78
CXCL1-201ENST00000395761 APPBP2Q92624 585 aa19.95■□□□□ 0.78
CXCL1-201ENST00000395761 ZKSCAN4Q969J2 545 aaPredicted RBP19.95■□□□□ 0.78
CXCL1-201ENST00000395761 WRNIP1Q96S55 665 aa19.95■□□□□ 0.78
CXCL1-201ENST00000395761 SEC62Q99442 399 aaKnown RBP19.95■□□□□ 0.78
CXCL1-201ENST00000395761 ZNF112Q9UJU3 913 aa19.95■□□□□ 0.78
CXCL1-201ENST00000395761 AK9Q5TCS8 1911 aa19.95■□□□□ 0.78
CXCL1-201ENST00000395761 MYH7P12883 1935 aa19.94■□□□□ 0.78
CXCL1-201ENST00000395761 COL2A1P02458 1487 aaPredicted RBP19.94■□□□□ 0.78
CXCL1-201ENST00000395761 FAM196BA6NMK8 535 aa19.94■□□□□ 0.78
CXCL1-201ENST00000395761 M0R2C6 588 aa19.94■□□□□ 0.78
CXCL1-201ENST00000395761 INPP5BP32019 993 aa19.94■□□□□ 0.78
CXCL1-201ENST00000395761 MKRN3Q13064 507 aaKnown RBP19.94■□□□□ 0.78
CXCL1-201ENST00000395761 VGLL4Q14135 290 aa19.94■□□□□ 0.78
CXCL1-201ENST00000395761 SKAP1Q86WV1 359 aa19.94■□□□□ 0.78
CXCL1-201ENST00000395761 AIDAQ96BJ3 306 aa19.94■□□□□ 0.78
CXCL1-201ENST00000395761 DHX36Q9H2U1 1008 aaKnown RBP19.94■□□□□ 0.78
CXCL1-201ENST00000395761 ELP3Q9H9T3 547 aa19.94■□□□□ 0.78
CXCL1-201ENST00000395761 UNCXA6NJT0 531 aa19.93■□□□□ 0.78
CXCL1-201ENST00000395761 PHF20L1A8MW92 1017 aa19.93■□□□□ 0.78
CXCL1-201ENST00000395761 LRRFIP1Q32MZ4 808 aaKnown RBP19.93■□□□□ 0.78
CXCL1-201ENST00000395761 ZMYM1Q5SVZ6 1142 aa19.93■□□□□ 0.78
CXCL1-201ENST00000395761 RILPL2Q969X0 211 aa19.93■□□□□ 0.78
CXCL1-201ENST00000395761 STRBPQ96SI9 672 aaKnown RBP19.93■□□□□ 0.78
CXCL1-201ENST00000395761 DCP1AQ9NPI6 582 aaPredicted RBP19.93■□□□□ 0.78
CXCL1-201ENST00000395761 PI4KBQ9UBF8 816 aa19.93■□□□□ 0.78
CXCL1-201ENST00000395761 FOCADQ5VW36 1801 aa19.92■□□□□ 0.78
CXCL1-201ENST00000395761 TBC1D12O60347 775 aa19.92■□□□□ 0.78
CXCL1-201ENST00000395761 MAP2K2P36507 400 aa19.92■□□□□ 0.78
CXCL1-201ENST00000395761 KIF23Q02241 960 aaPredicted RBP19.92■□□□□ 0.78
CXCL1-201ENST00000395761 NOGQ13253 232 aa19.92■□□□□ 0.78
CXCL1-201ENST00000395761 SPRYD7Q5W111 196 aa19.92■□□□□ 0.78
CXCL1-201ENST00000395761 CNKSR2Q8WXI2 1034 aa19.92■□□□□ 0.78
CXCL1-201ENST00000395761 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.92■□□□□ 0.78
CXCL1-201ENST00000395761 CSADQ9Y600 493 aa19.92■□□□□ 0.78
CXCL1-201ENST00000395761 SNCAIPQ9Y6H5 919 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms