RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 WTAPQ15007 396 aa20.82■□□□□ 0.92
SREBF1-204ENST00000395756 ALX1Q15699 326 aa20.82■□□□□ 0.92
SREBF1-204ENST00000395756 CCDC73Q6ZRK6 1079 aa20.82■□□□□ 0.92
SREBF1-204ENST00000395756 ZHX1Q9UKY1 873 aaPredicted RBP20.82■□□□□ 0.92
SREBF1-204ENST00000395756 WNK3Q9BYP7 1800 aa20.82■□□□□ 0.92
SREBF1-204ENST00000395756 SLC10A5Q5PT55 438 aa20.82■□□□□ 0.92
SREBF1-204ENST00000395756 RC3H1Q5TC82 1133 aaKnown RBP20.82■□□□□ 0.92
SREBF1-204ENST00000395756 KRT23Q9C075 422 aa20.82■□□□□ 0.92
SREBF1-204ENST00000395756 GNAT2P19087 354 aa20.81■□□□□ 0.92
SREBF1-204ENST00000395756 UBAC1Q9BSL1 405 aa20.81■□□□□ 0.92
SREBF1-204ENST00000395756 FAM217BQ9NTX9 383 aaPredicted RBP20.81■□□□□ 0.92
SREBF1-204ENST00000395756 ATRNO75882 1429 aa20.81■□□□□ 0.92
SREBF1-204ENST00000395756 ATP2B1P20020 1258 aa20.81■□□□□ 0.92
SREBF1-204ENST00000395756 MECOMQ03112 1051 aa20.81■□□□□ 0.92
SREBF1-204ENST00000395756 KRT40Q6A162 431 aa20.81■□□□□ 0.92
SREBF1-204ENST00000395756 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.81■□□□□ 0.92
SREBF1-204ENST00000395756 ZNF804BA4D1E1 1349 aa20.81■□□□□ 0.92
SREBF1-204ENST00000395756 TTC12Q9H892 705 aaPredicted RBP20.8■□□□□ 0.92
SREBF1-204ENST00000395756 USP17L12C9JPN9 530 aa20.8■□□□□ 0.92
SREBF1-204ENST00000395756 USP17L21D6R901 530 aa20.8■□□□□ 0.92
SREBF1-204ENST00000395756 MYSM1Q5VVJ2 828 aa20.8■□□□□ 0.92
SREBF1-204ENST00000395756 CNNM2Q9H8M5 875 aa20.8■□□□□ 0.92
SREBF1-204ENST00000395756 KCNJ14Q9UNX9 436 aa20.8■□□□□ 0.92
SREBF1-204ENST00000395756 COL1A1P02452 1464 aaPredicted RBP20.8■□□□□ 0.92
SREBF1-204ENST00000395756 KIF23Q02241 960 aaPredicted RBP20.8■□□□□ 0.92
SREBF1-204ENST00000395756 SART3Q15020 963 aaKnown RBP20.8■□□□□ 0.92
SREBF1-204ENST00000395756 RIOK1Q9BRS2 568 aaKnown RBP20.8■□□□□ 0.92
SREBF1-204ENST00000395756 KINO60870 393 aaKnown RBP20.79■□□□□ 0.92
SREBF1-204ENST00000395756 CNBD1Q8NA66 436 aa20.79■□□□□ 0.92
SREBF1-204ENST00000395756 PIBF1Q8WXW3 757 aa20.79■□□□□ 0.92
SREBF1-204ENST00000395756 SDF4Q9BRK5 362 aa20.79■□□□□ 0.92
SREBF1-204ENST00000395756 CCDC39Q9UFE4 941 aa20.79■□□□□ 0.92
SREBF1-204ENST00000395756 TM4SF1P30408 202 aa20.79■□□□□ 0.92
SREBF1-204ENST00000395756 PAXIP1Q6ZW49 1069 aaPredicted RBP20.79■□□□□ 0.92
SREBF1-204ENST00000395756 PNPLA7Q6ZV29 1317 aa20.79■□□□□ 0.92
SREBF1-204ENST00000395756 TRIM37O94972 964 aa20.78■□□□□ 0.92
SREBF1-204ENST00000395756 TRIM29Q14134 588 aa20.78■□□□□ 0.92
SREBF1-204ENST00000395756 UVSSAQ2YD98 709 aa20.78■□□□□ 0.92
SREBF1-204ENST00000395756 FBXO33Q7Z6M2 555 aa20.78■□□□□ 0.92
SREBF1-204ENST00000395756 LINC00301Q8NCQ3 95 aa20.78■□□□□ 0.92
SREBF1-204ENST00000395756 CBX8Q9HC52 389 aa20.78■□□□□ 0.92
SREBF1-204ENST00000395756 NOL7Q9UMY1 257 aaKnown RBP20.78■□□□□ 0.92
SREBF1-204ENST00000395756 CDKL5O76039 1030 aa20.78■□□□□ 0.92
SREBF1-204ENST00000395756 SSRP1Q08945 709 aaKnown RBP20.78■□□□□ 0.92
SREBF1-204ENST00000395756 STAG1Q8WVM7 1258 aa20.78■□□□□ 0.92
SREBF1-204ENST00000395756 NDUFA8P51970 172 aa20.78■□□□□ 0.92
SREBF1-204ENST00000395756 NTRK3Q16288 839 aa20.78■□□□□ 0.92
SREBF1-204ENST00000395756 FAM200AQ8TCP9 573 aa20.78■□□□□ 0.92
SREBF1-204ENST00000395756 NSUN4Q96CB9 384 aaKnown RBP20.78■□□□□ 0.92
SREBF1-204ENST00000395756 QTRT2Q9H974 415 aaKnown RBP20.78■□□□□ 0.92
SREBF1-204ENST00000395756 SPTLC2O15270 562 aa20.77■□□□□ 0.92
SREBF1-204ENST00000395756 CYP2D6P10635 497 aa20.77■□□□□ 0.92
SREBF1-204ENST00000395756 ZNF165P49910 485 aa20.77■□□□□ 0.92
SREBF1-204ENST00000395756 SNW1Q13573 536 aaKnown RBP20.77■□□□□ 0.92
SREBF1-204ENST00000395756 FAM47AQ5JRC9 791 aa20.77■□□□□ 0.92
SREBF1-204ENST00000395756 WDR19Q8NEZ3 1342 aa20.77■□□□□ 0.92
SREBF1-204ENST00000395756 DDX60Q8IY21 1712 aaKnown RBP20.77■□□□□ 0.91
SREBF1-204ENST00000395756 NMT2O60551 498 aa20.77■□□□□ 0.91
SREBF1-204ENST00000395756 RTN1Q16799 776 aa20.77■□□□□ 0.91
SREBF1-204ENST00000395756 ISM2Q6H9L7 571 aa20.77■□□□□ 0.91
SREBF1-204ENST00000395756 SGMS1Q86VZ5 419 aa20.76■□□□□ 0.91
SREBF1-204ENST00000395756 C17orf53Q8N3J3 647 aaPredicted RBP20.76■□□□□ 0.91
SREBF1-204ENST00000395756 RTEL1Q9NZ71 1219 aa20.76■□□□□ 0.91
SREBF1-204ENST00000395756 MTMR7Q9Y216 660 aa20.76■□□□□ 0.91
SREBF1-204ENST00000395756 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.76■□□□□ 0.91
SREBF1-204ENST00000395756 TNKSO95271 1327 aa20.76■□□□□ 0.91
SREBF1-204ENST00000395756 LIFRP42702 1097 aa20.76■□□□□ 0.91
SREBF1-204ENST00000395756 RNF41Q9H4P4 317 aaPredicted RBP20.76■□□□□ 0.91
SREBF1-204ENST00000395756 ZKSCAN5Q9Y2L8 839 aa20.76■□□□□ 0.91
SREBF1-204ENST00000395756 ANO1Q5XXA6 986 aa20.75■□□□□ 0.91
SREBF1-204ENST00000395756 DZIP1Q86YF9 867 aaKnown RBP20.75■□□□□ 0.91
SREBF1-204ENST00000395756 ANKRD2Q9GZV1 360 aa20.75■□□□□ 0.91
SREBF1-204ENST00000395756 BTBD18B2RXH4 712 aa20.75■□□□□ 0.91
SREBF1-204ENST00000395756 DIXDC1Q155Q3 683 aa20.75■□□□□ 0.91
SREBF1-204ENST00000395756 ESR2Q92731 530 aa20.75■□□□□ 0.91
SREBF1-204ENST00000395756 SPATA31A6Q5VVP1 1343 aa20.75■□□□□ 0.91
SREBF1-204ENST00000395756 BIN1O00499 593 aa20.75■□□□□ 0.91
SREBF1-204ENST00000395756 SPECC1Q5M775 1068 aa20.75■□□□□ 0.91
SREBF1-204ENST00000395756 CTR9Q6PD62 1173 aa20.75■□□□□ 0.91
SREBF1-204ENST00000395756 ZNF654Q8IZM8 581 aa20.75■□□□□ 0.91
SREBF1-204ENST00000395756 MRPS27Q92552 414 aaKnown RBP20.75■□□□□ 0.91
SREBF1-204ENST00000395756 LRP5O75197 1615 aa20.75■□□□□ 0.91
SREBF1-204ENST00000395756 FAM160A1Q05DH4 1040 aa20.74■□□□□ 0.91
SREBF1-204ENST00000395756 DRC7Q8IY82 874 aa20.74■□□□□ 0.91
SREBF1-204ENST00000395756 GRIK5Q16478 980 aa20.74■□□□□ 0.91
SREBF1-204ENST00000395756 CLIC6Q96NY7 704 aa20.74■□□□□ 0.91
SREBF1-204ENST00000395756 MYH7P12883 1935 aa20.73■□□□□ 0.91
SREBF1-204ENST00000395756 C11orf57Q6ZUT1 292 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-204ENST00000395756 FANCBQ8NB91 859 aa20.73■□□□□ 0.91
SREBF1-204ENST00000395756 RPGRQ92834 1020 aaKnown RBP20.73■□□□□ 0.91
SREBF1-204ENST00000395756 WDHD1O75717 1129 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-204ENST00000395756 ADALQ6DHV7 355 aa20.73■□□□□ 0.91
SREBF1-204ENST00000395756 BRAPQ7Z569 592 aa20.73■□□□□ 0.91
SREBF1-204ENST00000395756 PRR5LQ6MZQ0 368 aa20.72■□□□□ 0.91
SREBF1-204ENST00000395756 TRIM22Q8IYM9 498 aa20.72■□□□□ 0.91
SREBF1-204ENST00000395756 TRIM5Q9C035 493 aa20.72■□□□□ 0.91
SREBF1-204ENST00000395756 MCM9Q9NXL9 1143 aa20.72■□□□□ 0.91
SREBF1-204ENST00000395756 TRPC5Q9UL62 973 aaPredicted RBP20.72■□□□□ 0.91
SREBF1-204ENST00000395756 NR5A1Q13285 461 aa20.72■□□□□ 0.91
SREBF1-204ENST00000395756 IFIT1BQ5T764 474 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms