RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 TSHZ2Q9NRE2 1034 aa10.22□□□□□ -0.77
HERC4-203ENST00000395185 ABCF2Q9UG63 623 aa10.22□□□□□ -0.77
HERC4-203ENST00000395185 NDUFB9Q9Y6M9 179 aa10.22□□□□□ -0.77
HERC4-203ENST00000395185 SALL1Q9NSC2 1324 aa10.22□□□□□ -0.77
HERC4-203ENST00000395185 HIP1O00291 1037 aa10.21□□□□□ -0.77
HERC4-203ENST00000395185 GOLIM4O00461 696 aa10.21□□□□□ -0.77
HERC4-203ENST00000395185 SGSM2O43147 1006 aa10.21□□□□□ -0.77
HERC4-203ENST00000395185 ATMINO43313 823 aaPredicted RBP10.21□□□□□ -0.77
HERC4-203ENST00000395185 RASA3Q14644 834 aa10.21□□□□□ -0.77
HERC4-203ENST00000395185 TTF1Q15361 905 aaPredicted RBP10.21□□□□□ -0.77
HERC4-203ENST00000395185 ZMYM1Q5SVZ6 1142 aa10.21□□□□□ -0.77
HERC4-203ENST00000395185 RGMBQ6NW40 437 aa10.21□□□□□ -0.77
HERC4-203ENST00000395185 TMED8Q6PL24 325 aaPredicted RBP10.21□□□□□ -0.77
HERC4-203ENST00000395185 IL25Q9H293 177 aa10.21□□□□□ -0.77
HERC4-203ENST00000395185 TDRD3Q9H7E2 651 aaKnown RBP10.21□□□□□ -0.77
HERC4-203ENST00000395185 LRP2BPQ9P2M1 347 aa10.21□□□□□ -0.77
HERC4-203ENST00000395185 ZNF70Q9UC06 446 aaPredicted RBP10.21□□□□□ -0.77
HERC4-203ENST00000395185 TRPC6Q9Y210 931 aa10.21□□□□□ -0.77
HERC4-203ENST00000395185 TCRBV5S4A2TA0A5A2 114 aa10.2□□□□□ -0.78
HERC4-203ENST00000395185 TCP10L2B9ZVM9 353 aa10.2□□□□□ -0.78
HERC4-203ENST00000395185 RNF113AO15541 343 aaKnown RBP10.2□□□□□ -0.78
HERC4-203ENST00000395185 EIF5BO60841 1220 aaKnown RBP10.2□□□□□ -0.78
HERC4-203ENST00000395185 COL1A1P02452 1464 aaPredicted RBP10.2□□□□□ -0.78
HERC4-203ENST00000395185 ZFYP08048 801 aaPredicted RBP10.2□□□□□ -0.78
HERC4-203ENST00000395185 NOGQ13253 232 aa10.2□□□□□ -0.78
HERC4-203ENST00000395185 UBE3CQ15386 1083 aa10.2□□□□□ -0.78
HERC4-203ENST00000395185 PRAMEF18Q5VWM3 479 aa10.2□□□□□ -0.78
HERC4-203ENST00000395185 CYP4F22Q6NT55 531 aa10.2□□□□□ -0.78
HERC4-203ENST00000395185 DLK2Q6UY11 383 aa10.2□□□□□ -0.78
HERC4-203ENST00000395185 IL17RAQ96F46 866 aa10.2□□□□□ -0.78
HERC4-203ENST00000395185 DNAJC2Q99543 621 aaKnown RBP10.2□□□□□ -0.78
HERC4-203ENST00000395185 NOL10Q9BSC4 688 aaKnown RBP10.2□□□□□ -0.78
HERC4-203ENST00000395185 USP26Q9BXU7 913 aa10.2□□□□□ -0.78
HERC4-203ENST00000395185 BMP2KQ9NSY1 1161 aaPredicted RBP10.2□□□□□ -0.78
HERC4-203ENST00000395185 AKAP11Q9UKA4 1901 aa10.2□□□□□ -0.78
HERC4-203ENST00000395185 SCAF8Q9UPN6 1271 aaKnown RBP10.2□□□□□ -0.78
HERC4-203ENST00000395185 A0A1B0GUL6 1792 aa10.19□□□□□ -0.78
HERC4-203ENST00000395185 ARAP2Q8WZ64 1704 aa10.19□□□□□ -0.78
HERC4-203ENST00000395185 UNCXA6NJT0 531 aa10.19□□□□□ -0.78
HERC4-203ENST00000395185 UBE2Q2LH0YL09 131 aa10.19□□□□□ -0.78
HERC4-203ENST00000395185 ECM2O94769 699 aaPredicted RBP10.19□□□□□ -0.78
HERC4-203ENST00000395185 ADD2P35612 726 aa10.19□□□□□ -0.78
HERC4-203ENST00000395185 IREB2P48200 963 aaKnown RBP10.19□□□□□ -0.78
HERC4-203ENST00000395185 FKBP1CQ5VVH2 108 aa10.19□□□□□ -0.78
HERC4-203ENST00000395185 APOBEC3HQ6NTF7 200 aaKnown RBP10.19□□□□□ -0.78
HERC4-203ENST00000395185 ZNF384Q8TF68 577 aa10.19□□□□□ -0.78
HERC4-203ENST00000395185 SLC10A4Q96EP9 437 aa10.19□□□□□ -0.78
HERC4-203ENST00000395185 HELLSQ9NRZ9 838 aa10.19□□□□□ -0.78
HERC4-203ENST00000395185 USP40Q9NVE5 1235 aa10.19□□□□□ -0.78
HERC4-203ENST00000395185 RAI14Q9P0K7 980 aa10.19□□□□□ -0.78
HERC4-203ENST00000395185 RAD50Q92878 1312 aa10.18□□□□□ -0.78
HERC4-203ENST00000395185 TTLL13PA6NNM8 815 aa10.18□□□□□ -0.78
HERC4-203ENST00000395185 CA12O43570 354 aa10.18□□□□□ -0.78
HERC4-203ENST00000395185 BAG3O95817 575 aa10.18□□□□□ -0.78
HERC4-203ENST00000395185 CHGBP05060 677 aa10.18□□□□□ -0.78
HERC4-203ENST00000395185 NMIQ13287 307 aaPredicted RBP10.18□□□□□ -0.78
HERC4-203ENST00000395185 PRKG1Q13976 671 aa10.18□□□□□ -0.78
HERC4-203ENST00000395185 GRIK5Q16478 980 aa10.18□□□□□ -0.78
HERC4-203ENST00000395185 LRRFIP1Q32MZ4 808 aaKnown RBP10.18□□□□□ -0.78
HERC4-203ENST00000395185 FAM83AQ86UY5 434 aa10.18□□□□□ -0.78
HERC4-203ENST00000395185 RUFY2Q8WXA3 655 aa10.18□□□□□ -0.78
HERC4-203ENST00000395185 KCNB2Q92953 911 aa10.18□□□□□ -0.78
HERC4-203ENST00000395185 OSBP2Q969R2 916 aa10.18□□□□□ -0.78
HERC4-203ENST00000395185 FAM163AQ96GL9 167 aaPredicted RBP10.18□□□□□ -0.78
HERC4-203ENST00000395185 FAM227BQ96M60 508 aa10.18□□□□□ -0.78
HERC4-203ENST00000395185 FSD1Q9BTV5 496 aa10.18□□□□□ -0.78
HERC4-203ENST00000395185 LSG1Q9H089 658 aaKnown RBP10.18□□□□□ -0.78
HERC4-203ENST00000395185 ANGEL1Q9UNK9 670 aaKnown RBP10.18□□□□□ -0.78
HERC4-203ENST00000395185 PCDHAC2Q9Y5I4 1007 aa10.18□□□□□ -0.78
HERC4-203ENST00000395185 SPEF2Q9C093 1822 aa10.17□□□□□ -0.78
HERC4-203ENST00000395185 A0A0D9SFI3 127 aa10.17□□□□□ -0.78
HERC4-203ENST00000395185 HSPA1AP0DMV8 641 aaKnown RBP10.17□□□□□ -0.78
HERC4-203ENST00000395185 HSPA1BP0DMV9 641 aaKnown RBP10.17□□□□□ -0.78
HERC4-203ENST00000395185 PDE6AP16499 860 aa10.17□□□□□ -0.78
HERC4-203ENST00000395185 PRDX5P30044 214 aa10.17□□□□□ -0.78
HERC4-203ENST00000395185 CTCFP49711 727 aaPredicted RBP10.17□□□□□ -0.78
HERC4-203ENST00000395185 RBM25P49756 843 aaKnown RBP10.17□□□□□ -0.78
HERC4-203ENST00000395185 ATN1P54259 1190 aaPredicted RBP10.17□□□□□ -0.78
HERC4-203ENST00000395185 MAP3K12Q12852 859 aa10.17□□□□□ -0.78
HERC4-203ENST00000395185 MCMDC2Q4G0Z9 681 aa10.17□□□□□ -0.78
HERC4-203ENST00000395185 DCAF15Q66K64 600 aa10.17□□□□□ -0.78
HERC4-203ENST00000395185 CASC1Q6TDU7 716 aa10.17□□□□□ -0.78
HERC4-203ENST00000395185 APPBP2Q92624 585 aa10.17□□□□□ -0.78
HERC4-203ENST00000395185 TBC1D32Q96NH3 1257 aa10.17□□□□□ -0.78
HERC4-203ENST00000395185 TMEM106CQ9BVX2 250 aa10.17□□□□□ -0.78
HERC4-203ENST00000395185 DIAPH3Q9NSV4 1193 aa10.17□□□□□ -0.78
HERC4-203ENST00000395185 FOXP2O15409 715 aa10.16□□□□□ -0.78
HERC4-203ENST00000395185 REC8O95072 547 aa10.16□□□□□ -0.78
HERC4-203ENST00000395185 PLCG2P16885 1265 aa10.16□□□□□ -0.78
HERC4-203ENST00000395185 MECOMQ03112 1051 aa10.16□□□□□ -0.78
HERC4-203ENST00000395185 DIXDC1Q155Q3 683 aa10.16□□□□□ -0.78
HERC4-203ENST00000395185 SLFNL1Q499Z3 407 aa10.16□□□□□ -0.78
HERC4-203ENST00000395185 NBPF12Q5TAG4 269 aaPredicted RBP10.16□□□□□ -0.78
HERC4-203ENST00000395185 SLC9C2Q5TAH2 1124 aa10.16□□□□□ -0.78
HERC4-203ENST00000395185 NAA16Q6N069 864 aaPredicted RBP10.16□□□□□ -0.78
HERC4-203ENST00000395185 ZSCAN25Q6NSZ9 544 aa10.16□□□□□ -0.78
HERC4-203ENST00000395185 CDC42EP5Q6NZY7 148 aa10.16□□□□□ -0.78
HERC4-203ENST00000395185 CWC27Q6UX04 472 aaKnown RBP10.16□□□□□ -0.78
HERC4-203ENST00000395185 FAM151AQ8WW52 585 aa10.16□□□□□ -0.78
HERC4-203ENST00000395185 MAP4K1Q92918 833 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms