RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 ETFBP38117 255 aa11.28□□□□□ -0.6
PFDN6-205ENST00000395134 NASPP49321 788 aaPredicted RBP11.28□□□□□ -0.6
PFDN6-205ENST00000395134 SMTNP53814 917 aa11.28□□□□□ -0.6
PFDN6-205ENST00000395134 SIK1P57059 783 aa11.28□□□□□ -0.6
PFDN6-205ENST00000395134 CHMP4BP1P59074 171 aa11.28□□□□□ -0.6
PFDN6-205ENST00000395134 ITPK1Q13572 414 aa11.28□□□□□ -0.6
PFDN6-205ENST00000395134 RAB33AQ14088 237 aa11.28□□□□□ -0.6
PFDN6-205ENST00000395134 SPON2Q9BUD6 331 aa11.28□□□□□ -0.6
PFDN6-205ENST00000395134 SNPHO15079 494 aa11.27□□□□□ -0.61
PFDN6-205ENST00000395134 CDC45O75419 566 aa11.27□□□□□ -0.61
PFDN6-205ENST00000395134 POTEJP0CG39 1038 aa11.27□□□□□ -0.61
PFDN6-205ENST00000395134 C8orf34Q49A92 452 aa11.27□□□□□ -0.61
PFDN6-205ENST00000395134 TICAM2Q86XR7 235 aa11.27□□□□□ -0.61
PFDN6-205ENST00000395134 IFNL2Q8IZJ0 200 aa11.27□□□□□ -0.61
PFDN6-205ENST00000395134 TTC16Q8NEE8 873 aa11.27□□□□□ -0.61
PFDN6-205ENST00000395134 IFT43Q96FT9 208 aa11.27□□□□□ -0.61
PFDN6-205ENST00000395134 DEPDC7Q96QD5 511 aa11.27□□□□□ -0.61
PFDN6-205ENST00000395134 TSR3Q9UJK0 312 aaKnown RBP11.27□□□□□ -0.61
PFDN6-205ENST00000395134 KIF13BQ9NQT8 1826 aa11.27□□□□□ -0.61
PFDN6-205ENST00000395134 CLSPNQ9HAW4 1339 aa11.27□□□□□ -0.61
PFDN6-205ENST00000395134 KDM6AO15550 1401 aaPredicted RBP11.26□□□□□ -0.61
PFDN6-205ENST00000395134 TJP1Q07157 1748 aa11.26□□□□□ -0.61
PFDN6-205ENST00000395134 KIAA1551Q9HCM1 1747 aa11.26□□□□□ -0.61
PFDN6-205ENST00000395134 SENP3-EIF4A1A0A087X0R7 540 aa11.26□□□□□ -0.61
PFDN6-205ENST00000395134 SOWAHBA6NEL2 793 aa11.26□□□□□ -0.61
PFDN6-205ENST00000395134 RASA3Q14644 834 aa11.26□□□□□ -0.61
PFDN6-205ENST00000395134 ZNF530Q6P9A1 599 aaPredicted RBP11.26□□□□□ -0.61
PFDN6-205ENST00000395134 PI16Q6UXB8 463 aa11.26□□□□□ -0.61
PFDN6-205ENST00000395134 FANCLQ9NW38 375 aa11.26□□□□□ -0.61
PFDN6-205ENST00000395134 CICQ96RK0 1608 aaPredicted RBP11.26□□□□□ -0.61
PFDN6-205ENST00000395134 IGSF1Q8N6C5 1336 aa11.26□□□□□ -0.61
PFDN6-205ENST00000395134 BRCA1P38398 1863 aaKnown RBP11.25□□□□□ -0.61
PFDN6-205ENST00000395134 PCNTO95613 3336 aa11.25□□□□□ -0.61
PFDN6-205ENST00000395134 USP17L7P0C7H9 530 aa11.25□□□□□ -0.61
PFDN6-205ENST00000395134 DGKZQ13574 1117 aa11.25□□□□□ -0.61
PFDN6-205ENST00000395134 MORC1Q86VD1 984 aa11.25□□□□□ -0.61
PFDN6-205ENST00000395134 KIAA0825Q8IV33 1275 aa11.25□□□□□ -0.61
PFDN6-205ENST00000395134 ANKK1Q8NFD2 765 aa11.25□□□□□ -0.61
PFDN6-205ENST00000395134 FLAD1Q8NFF5 587 aa11.25□□□□□ -0.61
PFDN6-205ENST00000395134 GPR152Q8TDT2 470 aa11.25□□□□□ -0.61
PFDN6-205ENST00000395134 ATG3Q9NT62 314 aa11.25□□□□□ -0.61
PFDN6-205ENST00000395134 TYW1Q9NV66 732 aaKnown RBP11.25□□□□□ -0.61
PFDN6-205ENST00000395134 KBTBD4Q9NVX7 518 aa11.25□□□□□ -0.61
PFDN6-205ENST00000395134 STRIP2Q9ULQ0 834 aa11.25□□□□□ -0.61
PFDN6-205ENST00000395134 FAM221BA6H8Z2 402 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 ADH1BP00325 375 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 GNRH1P01148 92 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 RPLP1P05386 114 aaKnown RBP11.24□□□□□ -0.61
PFDN6-205ENST00000395134 PDGFRBP09619 1106 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 NOS2P35228 1153 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 CNGB1Q14028 1251 aaPredicted RBP11.24□□□□□ -0.61
PFDN6-205ENST00000395134 RTN1Q16799 776 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 ARSHQ5FYA8 562 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 SMC5Q8IY18 1101 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 EPS8L3Q8TE67 593 aaKnown RBP11.24□□□□□ -0.61
PFDN6-205ENST00000395134 SH3TC2Q8TF17 1288 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 APPBP2Q92624 585 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 CCDC74AQ96AQ1 378 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 GABBR1Q9UBS5 961 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 MRVI1Q9Y6F6 885 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 KDRP35968 1356 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 ATP10DQ9P241 1426 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 ZNF831Q5JPB2 1677 aa11.24□□□□□ -0.61
PFDN6-205ENST00000395134 CDK2AP1O14519 115 aa11.23□□□□□ -0.61
PFDN6-205ENST00000395134 HIRAP54198 1017 aaPredicted RBP11.23□□□□□ -0.61
PFDN6-205ENST00000395134 C1QTNF8P60827 252 aa11.23□□□□□ -0.61
PFDN6-205ENST00000395134 CCAR1Q8IX12 1150 aaKnown RBP11.23□□□□□ -0.61
PFDN6-205ENST00000395134 RSRP1Q9BUV0 290 aa11.23□□□□□ -0.61
PFDN6-205ENST00000395134 SRCIN1Q9C0H9 1055 aa11.23□□□□□ -0.61
PFDN6-205ENST00000395134 EFR3BQ9Y2G0 817 aa11.23□□□□□ -0.61
PFDN6-205ENST00000395134 MAP4K5Q9Y4K4 846 aa11.23□□□□□ -0.61
PFDN6-205ENST00000395134 A6NHS1 94 aa11.22□□□□□ -0.61
PFDN6-205ENST00000395134 TK2O00142 265 aa11.22□□□□□ -0.61
PFDN6-205ENST00000395134 GRIN3BO60391 1043 aa11.22□□□□□ -0.61
PFDN6-205ENST00000395134 WNT7BP56706 349 aa11.22□□□□□ -0.61
PFDN6-205ENST00000395134 COPS2P61201 443 aa11.22□□□□□ -0.61
PFDN6-205ENST00000395134 SH3BP2P78314 561 aa11.22□□□□□ -0.61
PFDN6-205ENST00000395134 VASH1Q7L8A9 365 aaPredicted RBP11.22□□□□□ -0.61
PFDN6-205ENST00000395134 FMNL3Q8IVF7 1028 aa11.22□□□□□ -0.61
PFDN6-205ENST00000395134 ALDH16A1Q8IZ83 802 aa11.22□□□□□ -0.61
PFDN6-205ENST00000395134 NOC4LQ9BVI4 516 aaKnown RBP11.22□□□□□ -0.61
PFDN6-205ENST00000395134 KLK14Q9P0G3 267 aa11.22□□□□□ -0.61
PFDN6-205ENST00000395134 CD2APQ9Y5K6 639 aa11.22□□□□□ -0.61
PFDN6-205ENST00000395134 AFDNP55196 1824 aaKnown RBP11.21□□□□□ -0.61
PFDN6-205ENST00000395134 SERTM1A2A2V5 107 aa11.21□□□□□ -0.61
PFDN6-205ENST00000395134 EML1O00423 815 aa11.21□□□□□ -0.61
PFDN6-205ENST00000395134 MMP10P09238 476 aa11.21□□□□□ -0.61
PFDN6-205ENST00000395134 IRS1P35568 1242 aa11.21□□□□□ -0.61
PFDN6-205ENST00000395134 CABP4P57796 275 aa11.21□□□□□ -0.61
PFDN6-205ENST00000395134 PLEKHO1Q53GL0 409 aaPredicted RBP11.21□□□□□ -0.61
PFDN6-205ENST00000395134 USPL1Q5W0Q7 1092 aa11.21□□□□□ -0.61
PFDN6-205ENST00000395134 SULT6B1Q6IMI4 303 aa11.21□□□□□ -0.61
PFDN6-205ENST00000395134 CYP2U1Q7Z449 544 aa11.21□□□□□ -0.61
PFDN6-205ENST00000395134 HNRNPLLQ8WVV9 542 aaKnown RBP11.21□□□□□ -0.61
PFDN6-205ENST00000395134 PMM1Q92871 262 aa11.21□□□□□ -0.61
PFDN6-205ENST00000395134 GINM1Q9NU53 330 aa11.21□□□□□ -0.61
PFDN6-205ENST00000395134 ADAMTS1Q9UHI8 967 aa11.21□□□□□ -0.61
PFDN6-205ENST00000395134 KNSTRNQ9Y448 316 aa11.21□□□□□ -0.61
PFDN6-205ENST00000395134 CCDC88AQ3V6T2 1871 aa11.21□□□□□ -0.62
PFDN6-205ENST00000395134 ARFGEF1Q9Y6D6 1849 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms