RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 CRISPLD2Q9H0B8 497 aa7.75□□□□□ -1.17
SMARCAD1-203ENST00000394961 WDR18Q9BV38 432 aa7.75□□□□□ -1.17
SMARCAD1-203ENST00000394961 CEP126Q9P2H0 1117 aa7.75□□□□□ -1.17
SMARCAD1-203ENST00000394961 IRF6O14896 467 aa7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 RHBDL3P58872 404 aa7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 TRMT44Q8IYL2 757 aaKnown RBP7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 WRNIP1Q96S55 665 aa7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 MORF4L1Q9UBU8 362 aa7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 HERC5Q9UII4 1024 aaKnown RBP7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 NOP58Q9Y2X3 529 aaKnown RBP7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 TCP10L2B9ZVM9 353 aa7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 UQCRFS1P1P0C7P4 283 aa7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 GJA8P48165 433 aa7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 RBM5P52756 815 aaKnown RBP eCLIP7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 SHISA4Q96DD7 197 aa7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 LDHCP07864 332 aa7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 SLC4A10Q6U841 1118 aa7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 PTCH2Q9Y6C5 1203 aa7.74□□□□□ -1.17
SMARCAD1-203ENST00000394961 POTEFA5A3E0 1075 aa7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 GJB1P08034 283 aa7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 PTPRAP18433 802 aa7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 CCDC102BQ68D86 513 aa7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 TRIM47Q96LD4 638 aa7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 AGTPBP1Q9UPW5 1226 aa7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 F8W031 263 aaPredicted RBP7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 IPO8O15397 1037 aaKnown RBP7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 IGHA2P01877 340 aa7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 GCLCP48506 637 aaPredicted RBP7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 CDAN1Q8IWY9 1227 aa7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 HOXA7P31268 230 aaPredicted RBP7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 FCGRTP55899 365 aa7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 HABP4Q5JVS0 413 aaKnown RBP7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 LBX2Q6XYB7 198 aa7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 SH3BP5LQ7L8J4 393 aa7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 OTUD5Q96G74 571 aa7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 C12orf42Q96LP6 360 aa7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 TMEM106CQ9BVX2 250 aa7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 DHX36Q9H2U1 1008 aaKnown RBP7.73□□□□□ -1.17
SMARCAD1-203ENST00000394961 PDHXO00330 501 aa7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 PLCG2P16885 1265 aa7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 BMP8BP34820 402 aa7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 SSH3Q8TE77 659 aa7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 PAK6Q9NQU5 681 aaPredicted RBP7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 PNMA3Q9UL41 463 aa7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 ROBO3Q96MS0 1386 aa7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 PABPC4Q13310 644 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 FAM110CQ1W6H9 321 aa7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 EHD4Q9H223 541 aa7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 SMC4Q9NTJ3 1288 aa7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 NOB1Q9ULX3 412 aaKnown RBP7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 SCAF8Q9UPN6 1271 aaKnown RBP7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 PLIN1O60240 522 aa7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 CTGFP29279 349 aa7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 SLC9C1Q4G0N8 1177 aa7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 NSUN4Q96CB9 384 aaKnown RBP7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 USP40Q9NVE5 1235 aa7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 PLXNA1Q9UIW2 1896 aa7.72□□□□□ -1.17
SMARCAD1-203ENST00000394961 OSBPP22059 807 aa7.71□□□□□ -1.17
SMARCAD1-203ENST00000394961 PHKA1P46020 1223 aa7.71□□□□□ -1.17
SMARCAD1-203ENST00000394961 RASGRF1Q13972 1273 aa7.71□□□□□ -1.17
SMARCAD1-203ENST00000394961 ZNF384Q8TF68 577 aa7.71□□□□□ -1.17
SMARCAD1-203ENST00000394961 LRRC37A2A6NM11 1700 aa7.71□□□□□ -1.17
SMARCAD1-203ENST00000394961 PRDX5P30044 214 aa7.71□□□□□ -1.18
SMARCAD1-203ENST00000394961 CNKSR2Q8WXI2 1034 aa7.71□□□□□ -1.18
SMARCAD1-203ENST00000394961 LRRFIP2Q9Y608 721 aaKnown RBP7.71□□□□□ -1.18
SMARCAD1-203ENST00000394961 MYPNQ86TC9 1320 aa7.71□□□□□ -1.18
SMARCAD1-203ENST00000394961 RGS3P49796 1198 aa7.71□□□□□ -1.18
SMARCAD1-203ENST00000394961 UBXN2AP68543 259 aa7.71□□□□□ -1.18
SMARCAD1-203ENST00000394961 FZD1Q9UP38 647 aa7.71□□□□□ -1.18
SMARCAD1-203ENST00000394961 C19orf81C9J6K1 198 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 XRCC5P13010 732 aaKnown RBP7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 INPP5BP32019 993 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 CHAF1AQ13111 956 aaPredicted RBP7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 ATF7IPQ6VMQ6 1270 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 ERICH6Q7L0X2 663 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 USP6NLQ92738 828 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 XAGE2Q96GT9 111 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 AS3MTQ9HBK9 375 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 A0A1B0GUL7 405 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 GNAI2P04899 355 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 NFIAQ12857 509 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 PRKG1Q13976 671 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 MAP3K21Q5TCX8 1036 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 ZKSCAN4Q969J2 545 aaPredicted RBP7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 HTATIP2Q9BUP3 242 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 GRK4P32298 578 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 MKRN3Q13064 507 aaKnown RBP7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 FOXP4Q8IVH2 680 aaPredicted RBP7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 HMG20BQ9P0W2 317 aa7.7□□□□□ -1.18
SMARCAD1-203ENST00000394961 COL11A1P12107 1806 aaPredicted RBP7.69□□□□□ -1.18
SMARCAD1-203ENST00000394961 ATP8B2P98198 1209 aa7.69□□□□□ -1.18
SMARCAD1-203ENST00000394961 MECOMQ03112 1051 aa7.69□□□□□ -1.18
SMARCAD1-203ENST00000394961 FAM9BQ8IZU0 186 aa7.69□□□□□ -1.18
SMARCAD1-203ENST00000394961 SPATA5Q8NB90 893 aa7.69□□□□□ -1.18
SMARCAD1-203ENST00000394961 KLHDC4Q8TBB5 520 aa7.69□□□□□ -1.18
SMARCAD1-203ENST00000394961 MEIS3Q99687 375 aa7.69□□□□□ -1.18
SMARCAD1-203ENST00000394961 PICK1Q9NRD5 415 aa7.69□□□□□ -1.18
SMARCAD1-203ENST00000394961 CAP2P40123 477 aa7.69□□□□□ -1.18
SMARCAD1-203ENST00000394961 BTDP43251 543 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms