RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 GPAA1O43292 621 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 MCM6Q14566 821 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 CDAN1Q8IWY9 1227 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 CPXCR1Q8N123 301 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 APPBP2Q92624 585 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 MTUS1Q9ULD2 1270 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 V9GY48 417 aaPredicted RBP11.65□□□□□ -0.54
COL4A6-203ENST00000394872 ALDH1B1P30837 517 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 HSPA4P34932 840 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 PSMC4P43686 418 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 CTDSPL2Q05D32 466 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 TCIRG1Q13488 830 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 ZNF569Q5MCW4 686 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 CNNM4Q6P4Q7 775 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 LPIN2Q92539 896 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 KIFC2Q96AC6 838 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 GLT8D2Q9H1C3 349 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 ZBTB40Q9NUA8 1239 aa11.65□□□□□ -0.54
COL4A6-203ENST00000394872 A0A1B0GVL5 298 aa11.65□□□□□ -0.55
COL4A6-203ENST00000394872 SLC27A2O14975 620 aa11.65□□□□□ -0.55
COL4A6-203ENST00000394872 PRDM1O75626 825 aa11.65□□□□□ -0.55
COL4A6-203ENST00000394872 RLBP1P12271 317 aa11.65□□□□□ -0.55
COL4A6-203ENST00000394872 SLC1A4P43007 532 aa11.65□□□□□ -0.55
COL4A6-203ENST00000394872 DDX17Q92841 729 aaKnown RBP11.65□□□□□ -0.55
COL4A6-203ENST00000394872 AZI2Q9H6S1 392 aa11.65□□□□□ -0.55
COL4A6-203ENST00000394872 PPP1R2P41236 205 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 SPATA24Q86W54 205 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
COL4A6-203ENST00000394872 LGR6Q9HBX8 967 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 CPA1P15085 419 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 ZBTB16Q05516 673 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 RASA3Q14644 834 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 CCDC6Q16204 474 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 IFT81Q8WYA0 676 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 CARD14Q9BXL6 1004 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 SH3BP5O60239 455 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 TNFAIP3P21580 790 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 MAP7D1Q3KQU3 841 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 TTC14Q96N46 770 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 MROH5Q6ZUA9 1318 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 DYNC1I1O14576 645 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 ADCY7P51828 1080 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 RILPL1Q5EBL4 403 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 LEO1Q8WVC0 666 aaPredicted RBP11.64□□□□□ -0.55
COL4A6-203ENST00000394872 STK24Q9Y6E0 443 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 SPATA5Q8NB90 893 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 TGFBRAP1Q8WUH2 860 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 ATRIPQ8WXE1 791 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 BABAM1Q9NWV8 329 aa11.64□□□□□ -0.55
COL4A6-203ENST00000394872 MTRF1LQ9UGC7 380 aaKnown RBP11.64□□□□□ -0.55
COL4A6-203ENST00000394872 MAPKAPK5Q8IW41 473 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.63□□□□□ -0.55
COL4A6-203ENST00000394872 PPIP5K2O43314 1243 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 DLGAP5Q15398 846 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 ATL3Q6DD88 541 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 FNBP4Q8N3X1 1017 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-203ENST00000394872 SRRTQ9BXP5 876 aaKnown RBP11.63□□□□□ -0.55
COL4A6-203ENST00000394872 EDC4Q6P2E9 1401 aaKnown RBP11.63□□□□□ -0.55
COL4A6-203ENST00000394872 ARHGEF10O15013 1369 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 DAPK3O43293 454 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 BAG6P46379 1132 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 IRX3P78415 501 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-203ENST00000394872 E7EVH7 732 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 M0QZ92 97 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 ANKS4BQ8N8V4 417 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 SMC6Q96SB8 1091 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 ANGEL1Q9UNK9 670 aaKnown RBP11.63□□□□□ -0.55
COL4A6-203ENST00000394872 SLU7O95391 586 aaKnown RBP11.63□□□□□ -0.55
COL4A6-203ENST00000394872 DNAJC10Q8IXB1 793 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 GPATCH11Q8N954 259 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 JAKMIP2Q96AA8 810 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 ZMYND15Q9H091 742 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 KIAA0556O60303 1618 aa11.63□□□□□ -0.55
COL4A6-203ENST00000394872 NSMFQ6X4W1 530 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 USP26Q9BXU7 913 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 H7C1D1 291 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 SPOPO43791 374 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 TUBB4AP04350 444 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 SUCLG2Q96I99 432 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 PTPRKQ15262 1439 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 TNNC1P63316 161 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 MSL1Q68DK7 614 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 CNGA4Q8IV77 575 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 UIMC1Q96RL1 719 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 PIK3C2GO75747 1445 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 DNM2P50570 870 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 CALCOCO2Q13137 446 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 VWA3BQ502W6 1294 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 SPOUT1Q5T280 376 aaKnown RBP11.62□□□□□ -0.55
COL4A6-203ENST00000394872 LIN9Q5TKA1 542 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 INTS4Q96HW7 963 aaKnown RBP11.62□□□□□ -0.55
COL4A6-203ENST00000394872 HAUS7Q99871 368 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 FAM204AQ9H8W3 233 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 KCNK9Q9NPC2 374 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 IL13P35225 146 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 KRT222Q8N1A0 295 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 AKR1B15C9JRZ8 316 aaPredicted RBP11.62□□□□□ -0.55
COL4A6-203ENST00000394872 CFBP00751 764 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 TTC38Q5R3I4 469 aa11.62□□□□□ -0.55
COL4A6-203ENST00000394872 PPP1R21Q6ZMI0 780 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms