RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 AGXT2Q9BYV1 514 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 MED1Q15648 1581 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-203ENST00000394419 CDC25BP30305 580 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 KCNQ4P56696 695 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 TNS3Q68CZ2 1445 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 STRBPQ96SI9 672 aaKnown RBP12.1□□□□□ -0.47
ACTN1-203ENST00000394419 ERICH4A6NGS2 130 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 PATL2C9JE40 543 aaKnown RBP12.1□□□□□ -0.47
ACTN1-203ENST00000394419 ADKP55263 362 aaKnown RBP12.1□□□□□ -0.47
ACTN1-203ENST00000394419 GNG11P61952 73 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 CCZ1BP86790 482 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 CCZ1P86791 482 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-203ENST00000394419 AKNAD1Q5T1N1 836 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 SHC4Q6S5L8 630 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 LCORLQ8N3X6 602 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 DPF2Q92785 391 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 VPS54Q9P1Q0 977 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 SERTAD1Q9UHV2 236 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 MROH7-TTC4A0A0A0MT08 1334 aa12.1□□□□□ -0.47
ACTN1-203ENST00000394419 BAZ2BQ9UIF8 2168 aaKnown RBP12.09□□□□□ -0.47
ACTN1-203ENST00000394419 KARSQ15046 597 aaKnown RBP12.09□□□□□ -0.47
ACTN1-203ENST00000394419 SMAP1Q8IYB5 467 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-203ENST00000394419 KRT23Q9C075 422 aa12.09□□□□□ -0.47
ACTN1-203ENST00000394419 NFE2L3Q9Y4A8 694 aa12.09□□□□□ -0.47
ACTN1-203ENST00000394419 CYP2D7A0A087X1C5 515 aa12.09□□□□□ -0.47
ACTN1-203ENST00000394419 TMEM232C9JQI7 657 aa12.09□□□□□ -0.47
ACTN1-203ENST00000394419 FOXP2O15409 715 aa12.09□□□□□ -0.47
ACTN1-203ENST00000394419 GYG1P46976 350 aa12.09□□□□□ -0.47
ACTN1-203ENST00000394419 ARMCX5Q6P1M9 558 aa12.09□□□□□ -0.47
ACTN1-203ENST00000394419 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.09□□□□□ -0.47
ACTN1-203ENST00000394419 RBM6P78332 1123 aaKnown RBP12.09□□□□□ -0.47
ACTN1-203ENST00000394419 UBE3CQ15386 1083 aa12.09□□□□□ -0.47
ACTN1-203ENST00000394419 NOSTRINQ8IVI9 506 aa12.09□□□□□ -0.47
ACTN1-203ENST00000394419 RGPD5Q99666 1765 aa12.08□□□□□ -0.48
ACTN1-203ENST00000394419 CCDC196A0A1B0GTZ2 297 aa12.08□□□□□ -0.48
ACTN1-203ENST00000394419 CASP1P29466 404 aa12.08□□□□□ -0.48
ACTN1-203ENST00000394419 ARHGAP29Q52LW3 1261 aa12.08□□□□□ -0.48
ACTN1-203ENST00000394419 TEX35Q5T0J7 233 aa12.08□□□□□ -0.48
ACTN1-203ENST00000394419 AXDND1Q5T1B0 1012 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-203ENST00000394419 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.08□□□□□ -0.48
ACTN1-203ENST00000394419 PPP1R13BQ96KQ4 1090 aa12.08□□□□□ -0.48
ACTN1-203ENST00000394419 V9GY48 417 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-203ENST00000394419 SALL1Q9NSC2 1324 aa12.08□□□□□ -0.48
ACTN1-203ENST00000394419 GRIN1Q05586 938 aa12.08□□□□□ -0.48
ACTN1-203ENST00000394419 ZNF174Q15697 407 aa12.08□□□□□ -0.48
ACTN1-203ENST00000394419 CNNM2Q9H8M5 875 aa12.08□□□□□ -0.48
ACTN1-203ENST00000394419 JCADQ9P266 1359 aa12.08□□□□□ -0.48
ACTN1-203ENST00000394419 KIF2AO00139 706 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-203ENST00000394419 CCDC152Q4G0S7 254 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 PPFIBP1Q86W92 1011 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 DESI2Q9BSY9 194 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 PCDHB6Q9Y5E3 794 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 LMO7Q8WWI1 1683 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 CUTAO60888 179 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 CSF1RP07333 972 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 SUSD4Q5VX71 490 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 KRBA2Q6ZNG9 492 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 LY9Q9HBG7 655 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 BRMS1Q9HCU9 246 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 GNL3LQ9NVN8 582 aaKnown RBP12.07□□□□□ -0.48
ACTN1-203ENST00000394419 IMPACTQ9P2X3 320 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 FBXO3Q9UK99 471 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 UBN2Q6ZU65 1347 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 TUBGCP6Q96RT7 1819 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 POLR3GO15318 223 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-203ENST00000394419 IFIT1BQ5T764 474 aaKnown RBP12.07□□□□□ -0.48
ACTN1-203ENST00000394419 SMIM5Q71RC9 77 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 NBPF11Q86T75 865 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 RNF41Q9H4P4 317 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-203ENST00000394419 LZTFL1Q9NQ48 299 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 MAPK8IP1Q9UQF2 711 aa12.07□□□□□ -0.48
ACTN1-203ENST00000394419 MST1RQ04912 1400 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 POSTNQ15063 836 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 E4F1Q66K89 784 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-203ENST00000394419 CATIPQ7Z7H3 387 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 IQCA1Q86XH1 822 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 SMYD4Q8IYR2 804 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-203ENST00000394419 ZNF654Q8IZM8 581 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 OXER1Q8TDS5 423 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 ESR2Q92731 530 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 ERO1AQ96HE7 468 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 ZNF335Q9H4Z2 1342 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-203ENST00000394419 MAGEB6P1A0A0J9YX57 407 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 VWA3AA6NCI4 1184 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 USP49Q70CQ1 688 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 ZNF397Q8NF99 534 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-203ENST00000394419 IGDCC4Q8TDY8 1250 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 BBXQ8WY36 941 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-203ENST00000394419 CARD6Q9BX69 1037 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 CHD2O14647 1828 aaKnown RBP12.06□□□□□ -0.48
ACTN1-203ENST00000394419 TRIM75PA6NK02 468 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 TRIM28Q13263 835 aaKnown RBP12.06□□□□□ -0.48
ACTN1-203ENST00000394419 CAVIN4Q5BKX8 364 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 KLHL34Q8N239 644 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 FANCBQ8NB91 859 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 NBPF3Q9H094 633 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 EPB41L4AQ9HCS5 686 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-203ENST00000394419 ARGLU1Q9NWB6 273 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-203ENST00000394419 OGFRQ9NZT2 677 aa12.06□□□□□ -0.48
ACTN1-203ENST00000394419 DACH1Q9UI36 760 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms