RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 NRDCO43847 1150 aa16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 PPP6R2O75170 966 aa16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 MBD4O95243 580 aa16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 MYL5Q02045 173 aa16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 METTL16Q86W50 562 aaKnown RBP16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 MAGEB6Q8N7X4 407 aa16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 CNNM3Q8NE01 707 aa16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 TIGD1Q96MW7 591 aa16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 SLC12A7Q9Y666 1083 aa16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 KDM4FA0A1W2PPD8 638 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 IKBKBO14920 756 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 GUCY1A2P33402 732 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 CMTR1Q8N1G2 835 aaKnown RBP16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 GTPBP4Q9BZE4 634 aaKnown RBP16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 NAPBQ9H115 298 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 EPB41L4AQ9HCS5 686 aaPredicted RBP16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 ZSWIM5Q9P217 1185 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 KCNJ14Q9UNX9 436 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 TACC3Q9Y6A5 838 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 KIF2AO00139 706 aaPredicted RBP16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 ATP2B1P20020 1258 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 HSPA2P54652 639 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 RESP18Q5W5W9 173 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 FOXP4Q8IVH2 680 aaPredicted RBP16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 TMEM87BQ96K49 555 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 KCND1Q9NSA2 647 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 FANCLQ9NW38 375 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 KCNH3Q9ULD8 1083 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 PCDHA5Q9Y5H7 936 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 PAPPAQ13219 1627 aa16.07■□□□□ 0.16
GAPVD1-205ENST00000394084 CDHR2Q9BYE9 1310 aa16.06■□□□□ 0.16
GAPVD1-205ENST00000394084 BTBD18B2RXH4 712 aa16.06■□□□□ 0.16
GAPVD1-205ENST00000394084 SSRP1Q08945 709 aaKnown RBP16.06■□□□□ 0.16
GAPVD1-205ENST00000394084 OLFM4Q6UX06 510 aa16.06■□□□□ 0.16
GAPVD1-205ENST00000394084 ZBTB1Q9Y2K1 713 aa16.06■□□□□ 0.16
GAPVD1-205ENST00000394084 TCRBV5S4A2TA0A5A2 114 aa16.06■□□□□ 0.16
GAPVD1-205ENST00000394084 PRKAB2O43741 272 aa16.06■□□□□ 0.16
GAPVD1-205ENST00000394084 GRIN1Q05586 938 aa16.06■□□□□ 0.16
GAPVD1-205ENST00000394084 ERCC6LQ2NKX8 1250 aa16.06■□□□□ 0.16
GAPVD1-205ENST00000394084 IFNL3Q8IZI9 196 aa16.06■□□□□ 0.16
GAPVD1-205ENST00000394084 TEX13AQ9BXU3 409 aaPredicted RBP16.06■□□□□ 0.16
GAPVD1-205ENST00000394084 PSDA5PKW4 1024 aaPredicted RBP16.06■□□□□ 0.16
GAPVD1-205ENST00000394084 PDE4BQ07343 736 aa16.06■□□□□ 0.16
GAPVD1-205ENST00000394084 KRBA2Q6ZNG9 492 aa16.06■□□□□ 0.16
GAPVD1-205ENST00000394084 DNAI1Q9UI46 699 aa16.05■□□□□ 0.16
GAPVD1-205ENST00000394084 CUTAO60888 179 aa16.05■□□□□ 0.16
GAPVD1-205ENST00000394084 UTP14AQ9BVJ6 771 aaKnown RBP16.05■□□□□ 0.16
GAPVD1-205ENST00000394084 DDX60Q8IY21 1712 aaKnown RBP16.05■□□□□ 0.16
GAPVD1-205ENST00000394084 SPATA5Q8NB90 893 aa16.04■□□□□ 0.16
GAPVD1-205ENST00000394084 ZNF512BQ96KM6 892 aaPredicted RBP16.04■□□□□ 0.16
GAPVD1-205ENST00000394084 SLC4A9Q96Q91 983 aa16.04■□□□□ 0.16
GAPVD1-205ENST00000394084 UQCRFS1P1P0C7P4 283 aa16.04■□□□□ 0.16
GAPVD1-205ENST00000394084 TOP1P11387 765 aaKnown RBP16.04■□□□□ 0.16
GAPVD1-205ENST00000394084 ARID4AP29374 1257 aaPredicted RBP16.04■□□□□ 0.16
GAPVD1-205ENST00000394084 ZNF827Q17R98 1081 aa16.04■□□□□ 0.16
GAPVD1-205ENST00000394084 FAM177A1Q8N128 213 aaPredicted RBP16.04■□□□□ 0.16
GAPVD1-205ENST00000394084 ATRNO75882 1429 aa16.04■□□□□ 0.16
GAPVD1-205ENST00000394084 PATL2C9JE40 543 aaKnown RBP16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 PDE8AO60658 829 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 BMP6P22004 513 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 RASGRF1Q13972 1273 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 PUM3Q15397 648 aaKnown RBP16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 SGMS1Q86VZ5 419 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 DIS3L2Q8IYB7 885 aaKnown RBP16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 GRAMD1CQ8IYS0 662 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 PDILTQ8N807 584 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 KRI1Q8N9T8 703 aaKnown RBP16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 TOGARAM1Q9Y4F4 1720 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 CBFA2T2O43439 604 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 TDO2P48775 406 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 NOSTRINQ8IVI9 506 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 LPIN2Q92539 896 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 MORC2Q9Y6X9 1032 aaPredicted RBP16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 VSTM4Q8IW00 320 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 MIGA1Q8NAN2 632 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 NUP133Q8WUM0 1156 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 L2HGDHQ9H9P8 463 aa16.03■□□□□ 0.16
GAPVD1-205ENST00000394084 FMNL1O95466 1100 aaPredicted RBP16.02■□□□□ 0.16
GAPVD1-205ENST00000394084 PRR29P0C7W0 189 aa16.02■□□□□ 0.16
GAPVD1-205ENST00000394084 TOB1P50616 345 aaPredicted RBP16.02■□□□□ 0.16
GAPVD1-205ENST00000394084 MAP3K12Q12852 859 aa16.02■□□□□ 0.16
GAPVD1-205ENST00000394084 NR5A1Q13285 461 aa16.02■□□□□ 0.16
GAPVD1-205ENST00000394084 MFSD6Q6ZSS7 791 aa16.02■□□□□ 0.16
GAPVD1-205ENST00000394084 ZNF771Q7L3S4 317 aaPredicted RBP16.02■□□□□ 0.16
GAPVD1-205ENST00000394084 TRMT44Q8IYL2 757 aaKnown RBP16.02■□□□□ 0.16
GAPVD1-205ENST00000394084 TMX1Q9H3N1 280 aa16.02■□□□□ 0.16
GAPVD1-205ENST00000394084 SHANK3Q9BYB0 1731 aa16.02■□□□□ 0.16
GAPVD1-205ENST00000394084 A0A0G2JS52 829 aa16.02■□□□□ 0.15
GAPVD1-205ENST00000394084 CYP19A1P11511 503 aaPredicted RBP16.02■□□□□ 0.15
GAPVD1-205ENST00000394084 SAFBQ15424 915 aaKnown RBP eCLIP16.02■□□□□ 0.15
GAPVD1-205ENST00000394084 AKNAD1Q5T1N1 836 aa16.02■□□□□ 0.15
GAPVD1-205ENST00000394084 LCORLQ8N3X6 602 aa16.02■□□□□ 0.15
GAPVD1-205ENST00000394084 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.02■□□□□ 0.15
GAPVD1-205ENST00000394084 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.02■□□□□ 0.15
GAPVD1-205ENST00000394084 POLR2DO15514 142 aaKnown RBP16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 LIFRP42702 1097 aa16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 ETF1P62495 437 aaKnown RBP16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 DZIP3Q86Y13 1208 aaKnown RBP16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 SEC31BQ9NQW1 1179 aa16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 SERTAD1Q9UHV2 236 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms