RNA–Protein interactions for RNA: ENST00000393868.6

SUCLG1-201, Transcript of succinate-CoA ligase alpha subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUCLG1, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-201ENST00000393868 CPSF1Q10570 1443 aaKnown RBP8.05□□□□□ -1.12
SUCLG1-201ENST00000393868 EDC4Q6P2E9 1401 aaKnown RBP8.05□□□□□ -1.12
SUCLG1-201ENST00000393868 LOC102724428A0A0B4J2F2 783 aa8.05□□□□□ -1.12
SUCLG1-201ENST00000393868 GHRHP01286 108 aa8.05□□□□□ -1.12
SUCLG1-201ENST00000393868 SIK1P57059 783 aa8.05□□□□□ -1.12
SUCLG1-201ENST00000393868 XPCQ01831 940 aaPredicted RBP8.05□□□□□ -1.12
SUCLG1-201ENST00000393868 PERM1Q5SV97 790 aa8.05□□□□□ -1.12
SUCLG1-201ENST00000393868 C8orf86Q6ZUL3 223 aa8.05□□□□□ -1.12
SUCLG1-201ENST00000393868 LPIN3Q9BQK8 851 aa8.05□□□□□ -1.12
SUCLG1-201ENST00000393868 PLVAPQ9BX97 442 aa8.05□□□□□ -1.12
SUCLG1-201ENST00000393868 LRRC7Q96NW7 1537 aa8.04□□□□□ -1.12
SUCLG1-201ENST00000393868 ADGRL3Q9HAR2 1447 aa8.04□□□□□ -1.12
SUCLG1-201ENST00000393868 ADGRB2O60241 1585 aa8.04□□□□□ -1.12
SUCLG1-201ENST00000393868 U2SURPO15042 1029 aaKnown RBP8.04□□□□□ -1.12
SUCLG1-201ENST00000393868 FZD6O60353 706 aa8.04□□□□□ -1.12
SUCLG1-201ENST00000393868 NID1P14543 1247 aa8.04□□□□□ -1.12
SUCLG1-201ENST00000393868 COL8A1P27658 744 aa8.04□□□□□ -1.12
SUCLG1-201ENST00000393868 EHHADHQ08426 723 aa8.04□□□□□ -1.12
SUCLG1-201ENST00000393868 HYAL2Q12891 473 aa8.04□□□□□ -1.12
SUCLG1-201ENST00000393868 XKR5Q6UX68 686 aa8.04□□□□□ -1.12
SUCLG1-201ENST00000393868 HFE2Q6ZVN8 426 aa8.04□□□□□ -1.12
SUCLG1-201ENST00000393868 ANKARQ7Z5J8 1434 aa8.04□□□□□ -1.12
SUCLG1-201ENST00000393868 CDC42BPGQ6DT37 1551 aa8.03□□□□□ -1.12
SUCLG1-201ENST00000393868 ZBTB7CA1YPR0 619 aa8.03□□□□□ -1.12
SUCLG1-201ENST00000393868 U2AF1L5P0DN76 240 aaPredicted RBP8.03□□□□□ -1.12
SUCLG1-201ENST00000393868 U2AF1Q01081 240 aaKnown RBP eCLIP8.03□□□□□ -1.12
SUCLG1-201ENST00000393868 RRS1Q15050 365 aaKnown RBP8.03□□□□□ -1.12
SUCLG1-201ENST00000393868 PRRT3Q5FWE3 981 aa8.03□□□□□ -1.12
SUCLG1-201ENST00000393868 TTC9Q92623 222 aa8.03□□□□□ -1.12
SUCLG1-201ENST00000393868 NUDCQ9Y266 331 aa8.03□□□□□ -1.12
SUCLG1-201ENST00000393868 USP6P35125 1406 aa8.03□□□□□ -1.12
SUCLG1-201ENST00000393868 CHD2O14647 1828 aaKnown RBP8.03□□□□□ -1.12
SUCLG1-201ENST00000393868 NKTRP30414 1462 aaKnown RBP8.02□□□□□ -1.12
SUCLG1-201ENST00000393868 MSH6P52701 1360 aa8.02□□□□□ -1.13
SUCLG1-201ENST00000393868 AFF1P51825 1210 aaKnown RBP8.02□□□□□ -1.13
SUCLG1-201ENST00000393868 COL9A3Q14050 684 aaPredicted RBP8.02□□□□□ -1.13
SUCLG1-201ENST00000393868 SPACA7Q96KW9 195 aa8.02□□□□□ -1.13
SUCLG1-201ENST00000393868 SMG9Q9H0W8 520 aaKnown RBP8.02□□□□□ -1.13
SUCLG1-201ENST00000393868 TMEM63CQ9P1W3 806 aa8.02□□□□□ -1.13
SUCLG1-201ENST00000393868 POLKQ9UBT6 870 aa8.02□□□□□ -1.13
SUCLG1-201ENST00000393868 BRPF3Q9ULD4 1205 aa8.02□□□□□ -1.13
SUCLG1-201ENST00000393868 GNEQ9Y223 722 aaKnown RBP8.02□□□□□ -1.13
SUCLG1-201ENST00000393868 ZBED9Q6R2W3 1325 aa8.02□□□□□ -1.13
SUCLG1-201ENST00000393868 TTC21AQ8NDW8 1320 aa8.02□□□□□ -1.13
SUCLG1-201ENST00000393868 POLR3AO14802 1390 aaPredicted RBP8.02□□□□□ -1.13
SUCLG1-201ENST00000393868 J3QW42 95 aa8.01□□□□□ -1.13
SUCLG1-201ENST00000393868 DIAPH1O60610 1272 aaKnown RBP8.01□□□□□ -1.13
SUCLG1-201ENST00000393868 TRAPPC3LQ5T215 181 aa8.01□□□□□ -1.13
SUCLG1-201ENST00000393868 KRT28Q7Z3Y7 464 aa8.01□□□□□ -1.13
SUCLG1-201ENST00000393868 PLD4Q96BZ4 506 aa8.01□□□□□ -1.13
SUCLG1-201ENST00000393868 CCDC87Q9NVE4 849 aa8.01□□□□□ -1.13
SUCLG1-201ENST00000393868 A6NHS1 94 aa8□□□□□ -1.13
SUCLG1-201ENST00000393868 APAF1O14727 1248 aa8□□□□□ -1.13
SUCLG1-201ENST00000393868 NDUFB5O43674 189 aa8□□□□□ -1.13
SUCLG1-201ENST00000393868 SPATA31C1P0DKV0 1188 aa8□□□□□ -1.13
SUCLG1-201ENST00000393868 AMPHP49418 695 aa8□□□□□ -1.13
SUCLG1-201ENST00000393868 TRIM28Q13263 835 aaKnown RBP8□□□□□ -1.13
SUCLG1-201ENST00000393868 KCTD17Q8N5Z5 321 aa8□□□□□ -1.13
SUCLG1-201ENST00000393868 DDX17Q92841 729 aaKnown RBP8□□□□□ -1.13
SUCLG1-201ENST00000393868 TRAIPQ9BWF2 469 aa8□□□□□ -1.13
SUCLG1-201ENST00000393868 USP32Q8NFA0 1604 aa8□□□□□ -1.13
SUCLG1-201ENST00000393868 NWD1Q149M9 1564 aa8□□□□□ -1.13
SUCLG1-201ENST00000393868 NCAPG2Q86XI2 1143 aa8□□□□□ -1.13
SUCLG1-201ENST00000393868 GJD3Q8N144 294 aa8□□□□□ -1.13
SUCLG1-201ENST00000393868 SNX29Q8TEQ0 813 aa8□□□□□ -1.13
SUCLG1-201ENST00000393868 PMEPA1Q969W9 287 aa8□□□□□ -1.13
SUCLG1-201ENST00000393868 C1orf167Q5SNV9 1468 aa8□□□□□ -1.13
SUCLG1-201ENST00000393868 XIRP1Q702N8 1843 aaKnown RBP7.99□□□□□ -1.13
SUCLG1-201ENST00000393868 KIF4AO95239 1232 aa7.99□□□□□ -1.13
SUCLG1-201ENST00000393868 CYP2E1P05181 493 aaPredicted RBP7.99□□□□□ -1.13
SUCLG1-201ENST00000393868 CES1P23141 567 aa7.99□□□□□ -1.13
SUCLG1-201ENST00000393868 RAC1P63000 192 aa7.99□□□□□ -1.13
SUCLG1-201ENST00000393868 ARHGAP4P98171 946 aa7.99□□□□□ -1.13
SUCLG1-201ENST00000393868 WFDC8Q8IUA0 241 aa7.99□□□□□ -1.13
SUCLG1-201ENST00000393868 CNTN3Q9P232 1028 aa7.99□□□□□ -1.13
SUCLG1-201ENST00000393868 RRP7AQ9Y3A4 280 aaKnown RBP7.99□□□□□ -1.13
SUCLG1-201ENST00000393868 NALCNQ8IZF0 1738 aa7.99□□□□□ -1.13
SUCLG1-201ENST00000393868 NCOA3Q9Y6Q9 1424 aa7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 FMN2Q9NZ56 1722 aa7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 KRBA1A5PL33 1030 aa7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 SOWAHDA6NJG2 315 aa7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 PHACTR2O75167 634 aa7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 HMOX1P09601 288 aa7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 KCNA1Q09470 495 aa7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 GRIK5Q16478 980 aa7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 ECM1Q16610 540 aa7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 COL13A1Q5TAT6 717 aaPredicted RBP7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 MSL1Q68DK7 614 aa7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 C1orf127Q8N9H9 656 aa7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 RUNDC1Q96C34 613 aa7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 LTV1Q96GA3 475 aaPredicted RBP7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 AATKQ6ZMQ8 1374 aa7.98□□□□□ -1.13
SUCLG1-201ENST00000393868 BLMP54132 1417 aaPredicted RBP7.97□□□□□ -1.13
SUCLG1-201ENST00000393868 SSH2Q76I76 1423 aa7.97□□□□□ -1.13
SUCLG1-201ENST00000393868 PATL2C9JE40 543 aaKnown RBP7.97□□□□□ -1.13
SUCLG1-201ENST00000393868 TNFRSF21O75509 655 aa7.97□□□□□ -1.13
SUCLG1-201ENST00000393868 SMNDC1O75940 238 aaKnown RBP eCLIP7.97□□□□□ -1.13
SUCLG1-201ENST00000393868 NEFMP07197 916 aa7.97□□□□□ -1.13
SUCLG1-201ENST00000393868 PDE3BQ13370 1112 aa7.97□□□□□ -1.13
SUCLG1-201ENST00000393868 PLA2G4EQ3MJ16 856 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms