RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 TGFBRAP1Q8WUH2 860 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 TMEM87BQ96K49 555 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 RTFDC1Q9BY42 306 aaPredicted RBP10.16□□□□□ -0.78
TDP1-203ENST00000393454 KCNQ5Q9NR82 932 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 ANAPC4Q9UJX5 808 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 ANGEL1Q9UNK9 670 aaKnown RBP10.16□□□□□ -0.78
TDP1-203ENST00000393454 TTF2Q9UNY4 1162 aaKnown RBP10.16□□□□□ -0.78
TDP1-203ENST00000393454 TIAM2Q8IVF5 1701 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 GPR75-ASB3A0A0A6YYF3 556 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 DDX11L8A8MPP1 907 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 GOLGA8BA8MQT2 603 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 GOLGA6L22H0YM25 854 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 SMIM22K7EJ46 135 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 SH2B2O14492 632 aaPredicted RBP10.16□□□□□ -0.78
TDP1-203ENST00000393454 PPIP5K2O43314 1243 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 CYP2D6P10635 497 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 PLCG2P16885 1265 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 CCDC93Q567U6 631 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 LARP1BQ659C4 914 aaKnown RBP10.16□□□□□ -0.78
TDP1-203ENST00000393454 AMOTL1Q8IY63 956 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 TEX11Q8IYF3 940 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 CERS5Q8N5B7 392 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 UPF1Q92900 1129 aaKnown RBP eCLIP10.16□□□□□ -0.78
TDP1-203ENST00000393454 CHMP4CQ96CF2 233 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 DDX11Q96FC9 970 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 ZKSCAN3Q9BRR0 538 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 NCOA5Q9HCD5 579 aaKnown RBP10.16□□□□□ -0.78
TDP1-203ENST00000393454 ARPP21Q9UBL0 812 aaPredicted RBP10.16□□□□□ -0.78
TDP1-203ENST00000393454 BRPF3Q9ULD4 1205 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 SUGT1Q9Y2Z0 365 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 DLEC1Q9Y238 1755 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 ERICH2A1L162 156 aa10.15□□□□□ -0.78
TDP1-203ENST00000393454 VPS37CA5D8V6 355 aaPredicted RBP10.15□□□□□ -0.78
TDP1-203ENST00000393454 PSDA5PKW4 1024 aaPredicted RBP10.15□□□□□ -0.78
TDP1-203ENST00000393454 RANBP6O60518 1105 aaKnown RBP10.15□□□□□ -0.78
TDP1-203ENST00000393454 JAK2O60674 1132 aa10.15□□□□□ -0.78
TDP1-203ENST00000393454 PRDM1O75626 825 aa10.15□□□□□ -0.78
TDP1-203ENST00000393454 USP17L8P0C7I0 530 aa10.15□□□□□ -0.78
TDP1-203ENST00000393454 KCNA3P22001 575 aa10.15□□□□□ -0.78
TDP1-203ENST00000393454 SCNN1DP51172 638 aa10.15□□□□□ -0.78
TDP1-203ENST00000393454 SART3Q15020 963 aaKnown RBP10.15□□□□□ -0.78
TDP1-203ENST00000393454 FOXD4L6Q3SYB3 417 aaPredicted RBP10.15□□□□□ -0.78
TDP1-203ENST00000393454 MCTP1Q6DN14 999 aa10.15□□□□□ -0.78
TDP1-203ENST00000393454 FOXD4L3Q6VB84 417 aaPredicted RBP10.15□□□□□ -0.78
TDP1-203ENST00000393454 CERS3Q8IU89 383 aa10.15□□□□□ -0.78
TDP1-203ENST00000393454 MAPKAPK5Q8IW41 473 aa10.15□□□□□ -0.78
TDP1-203ENST00000393454 RTKN2Q8IZC4 609 aa10.15□□□□□ -0.78
TDP1-203ENST00000393454 FAM184AQ8NB25 1140 aa10.15□□□□□ -0.78
TDP1-203ENST00000393454 ESR2Q92731 530 aa10.15□□□□□ -0.78
TDP1-203ENST00000393454 CCDC69A6NI79 296 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 PDCP20941 246 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 EVCP57679 992 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 KIAA2012Q0VF49 1180 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 GRIPAP1Q4V328 841 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 SBK1Q52WX2 424 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 IGDCC4Q8TDY8 1250 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 FAM163AQ96GL9 167 aaPredicted RBP10.14□□□□□ -0.79
TDP1-203ENST00000393454 LLPHQ9BRT6 129 aaKnown RBP10.14□□□□□ -0.79
TDP1-203ENST00000393454 UBAC1Q9BSL1 405 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 PIM2Q9P1W9 311 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 SAP30BPQ9UHR5 308 aaKnown RBP10.14□□□□□ -0.79
TDP1-203ENST00000393454 USP17L3A6NCW0 530 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 USP17L4A6NCW7 530 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 DHX16O60231 1041 aaKnown RBP10.14□□□□□ -0.79
TDP1-203ENST00000393454 POLR3DP05423 398 aaPredicted RBP10.14□□□□□ -0.79
TDP1-203ENST00000393454 ZSCAN22P10073 491 aaPredicted RBP10.14□□□□□ -0.79
TDP1-203ENST00000393454 TGFB2P61812 414 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 EVX2Q03828 476 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 PDE4BQ07343 736 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 WTAPQ15007 396 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 SYNE3Q6ZMZ3 975 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 USP17L1Q7RTZ2 530 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 SENP2Q9HC62 589 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 DAGLAQ9Y4D2 1042 aa10.14□□□□□ -0.79
TDP1-203ENST00000393454 GAKO14976 1311 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 PTPDC1A2A3K4 754 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 CPLX1O14810 134 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 PPFIA3O75145 1194 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 STRIP1Q5VSL9 837 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 CLEC17AQ6ZS10 378 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 KIAA0825Q8IV33 1275 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 NSUN7Q8NE18 718 aaKnown RBP10.13□□□□□ -0.79
TDP1-203ENST00000393454 LY9Q9HBG7 655 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 SLC12A7Q9Y666 1083 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 KIF13BQ9NQT8 1826 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 LAMB1P07942 1786 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 NAV1Q8NEY1 1877 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 ZBTB43O43298 467 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 CTDNEP1O95476 244 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 PCP11498 1178 aaKnown RBP10.13□□□□□ -0.79
TDP1-203ENST00000393454 RXRAP19793 462 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 PTMSP20962 102 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 LIFRP42702 1097 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 METAP2P50579 478 aaKnown RBP eCLIP10.13□□□□□ -0.79
TDP1-203ENST00000393454 RBM5P52756 815 aaKnown RBP eCLIP10.13□□□□□ -0.79
TDP1-203ENST00000393454 FOSBP53539 338 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 RHBDL3P58872 404 aa10.13□□□□□ -0.79
TDP1-203ENST00000393454 HMGN5P82970 282 aaKnown RBP10.13□□□□□ -0.79
TDP1-203ENST00000393454 DALRD3Q5D0E6 543 aaKnown RBP10.13□□□□□ -0.79
TDP1-203ENST00000393454 C12orf60Q5U649 245 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms