RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 KCNH3Q9ULD8 1083 aa12.06□□□□□ -0.48
CALD1-203ENST00000393118 V9GY48 417 aaPredicted RBP12.06□□□□□ -0.48
CALD1-203ENST00000393118 SETD1AO15047 1707 aaKnown RBP12.06□□□□□ -0.48
CALD1-203ENST00000393118 GNPATO15228 680 aa12.06□□□□□ -0.48
CALD1-203ENST00000393118 YEATS4O95619 227 aa12.06□□□□□ -0.48
CALD1-203ENST00000393118 SNW1Q13573 536 aaKnown RBP12.06□□□□□ -0.48
CALD1-203ENST00000393118 TBC1D10CQ8IV04 446 aa12.06□□□□□ -0.48
CALD1-203ENST00000393118 SMARCC1Q92922 1105 aaPredicted RBP12.06□□□□□ -0.48
CALD1-203ENST00000393118 MCM9Q9NXL9 1143 aa12.06□□□□□ -0.48
CALD1-203ENST00000393118 URI1O94763 535 aaPredicted RBP12.06□□□□□ -0.48
CALD1-203ENST00000393118 ZNF444Q8N0Y2 327 aaPredicted RBP12.06□□□□□ -0.48
CALD1-203ENST00000393118 KCNB2Q92953 911 aa12.06□□□□□ -0.48
CALD1-203ENST00000393118 CCDC47Q96A33 483 aaKnown RBP12.06□□□□□ -0.48
CALD1-203ENST00000393118 AATFQ9NY61 560 aaKnown RBP eCLIP12.06□□□□□ -0.48
CALD1-203ENST00000393118 TRIM75PA6NK02 468 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 POLR2DO15514 142 aaKnown RBP12.05□□□□□ -0.48
CALD1-203ENST00000393118 PNOCQ13519 176 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 GOLPH3LQ9H4A5 285 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 CYP19A1P11511 503 aaPredicted RBP12.05□□□□□ -0.48
CALD1-203ENST00000393118 RFC4P35249 363 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 PDE4BQ07343 736 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 DPCR1Q3MIW9 517 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 FAM182BQ5T319 152 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 LINC00301Q8NCQ3 95 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 VPS54Q9P1Q0 977 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 ZSWIM5Q9P217 1185 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 LMTK3Q96Q04 1460 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 PTPN21Q16825 1174 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 LEKR1Q6ZMV7 388 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 LCORLQ8N3X6 602 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 RTEL1Q9NZ71 1219 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 DENND2AQ9ULE3 1009 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 KIF13AQ9H1H9 1805 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 ZMYM6O95789 1325 aa12.05□□□□□ -0.48
CALD1-203ENST00000393118 CASP7P55210 303 aa12.04□□□□□ -0.48
CALD1-203ENST00000393118 EXOSC10Q01780 885 aaKnown RBP12.04□□□□□ -0.48
CALD1-203ENST00000393118 XPO4Q9C0E2 1151 aaKnown RBP12.04□□□□□ -0.48
CALD1-203ENST00000393118 KAT14Q9H8E8 782 aa12.04□□□□□ -0.48
CALD1-203ENST00000393118 GABPB1Q06547 395 aaPredicted RBP12.04□□□□□ -0.48
CALD1-203ENST00000393118 ZNF174Q15697 407 aa12.04□□□□□ -0.48
CALD1-203ENST00000393118 SMIM5Q71RC9 77 aa12.04□□□□□ -0.48
CALD1-203ENST00000393118 CYB5R4Q7L1T6 521 aa12.04□□□□□ -0.48
CALD1-203ENST00000393118 SMARCC2Q8TAQ2 1214 aa12.04□□□□□ -0.48
CALD1-203ENST00000393118 TMEM51Q9NW97 253 aa12.04□□□□□ -0.48
CALD1-203ENST00000393118 MST1RQ04912 1400 aa12.04□□□□□ -0.48
CALD1-203ENST00000393118 CCDC194A0A1B0GVG4 234 aa12.04□□□□□ -0.48
CALD1-203ENST00000393118 IPO7O95373 1038 aaKnown RBP12.04□□□□□ -0.48
CALD1-203ENST00000393118 KIF23Q02241 960 aaPredicted RBP12.04□□□□□ -0.48
CALD1-203ENST00000393118 RIPOR2Q9Y4F9 1068 aa12.04□□□□□ -0.48
CALD1-203ENST00000393118 C6orf229H3BNL8 230 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 CTDNEP1O95476 244 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 PPARAQ07869 468 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 ARID5BQ14865 1188 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.03□□□□□ -0.48
CALD1-203ENST00000393118 ZNF654Q8IZM8 581 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 TDRD7Q8NHU6 1098 aaKnown RBP12.03□□□□□ -0.48
CALD1-203ENST00000393118 CACTINQ8WUQ7 758 aaKnown RBP12.03□□□□□ -0.48
CALD1-203ENST00000393118 STAMQ92783 540 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 USP17L12C9JPN9 530 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 USP17L21D6R901 530 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 CCP110O43303 1012 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 ZNF827Q17R98 1081 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 FAM47AQ5JRC9 791 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 SOGA3Q5TF21 947 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 TPTE2Q6XPS3 522 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 STRBPQ96SI9 672 aaKnown RBP12.03□□□□□ -0.48
CALD1-203ENST00000393118 RSPH14Q9UHP6 348 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 CYP2D7A0A087X1C5 515 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 DEXIO95424 95 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 IRX5P78411 483 aaPredicted RBP12.03□□□□□ -0.48
CALD1-203ENST00000393118 SETQ01105 290 aaPredicted RBP12.03□□□□□ -0.48
CALD1-203ENST00000393118 MYL5Q02045 173 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 KIAA1524Q8TCG1 905 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 RPGRQ92834 1020 aaKnown RBP12.03□□□□□ -0.48
CALD1-203ENST00000393118 ALDH8A1Q9H2A2 487 aaPredicted RBP12.03□□□□□ -0.48
CALD1-203ENST00000393118 PALLDQ8WX93 1383 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 TRIM28Q13263 835 aaKnown RBP12.03□□□□□ -0.48
CALD1-203ENST00000393118 MB21D2Q8IYB1 491 aaPredicted RBP12.03□□□□□ -0.48
CALD1-203ENST00000393118 CCDC150Q8NCX0 1101 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 AK7Q96M32 723 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 DNAI1Q9UI46 699 aa12.03□□□□□ -0.48
CALD1-203ENST00000393118 VWA3AA6NCI4 1184 aa12.02□□□□□ -0.48
CALD1-203ENST00000393118 MCM7P33993 719 aa12.02□□□□□ -0.48
CALD1-203ENST00000393118 FANCCQ00597 558 aa12.02□□□□□ -0.48
CALD1-203ENST00000393118 TRMT44Q8IYL2 757 aaKnown RBP12.02□□□□□ -0.48
CALD1-203ENST00000393118 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.02□□□□□ -0.48
CALD1-203ENST00000393118 OVOS2A0A0G2JMS6 1433 aa12.02□□□□□ -0.48
CALD1-203ENST00000393118 SH2B2O14492 632 aaPredicted RBP12.02□□□□□ -0.49
CALD1-203ENST00000393118 IKQ13123 557 aaPredicted RBP12.02□□□□□ -0.49
CALD1-203ENST00000393118 RILPL1Q5EBL4 403 aa12.02□□□□□ -0.49
CALD1-203ENST00000393118 TNKSO95271 1327 aa12.02□□□□□ -0.49
CALD1-203ENST00000393118 NFAT5O94916 1531 aa12.02□□□□□ -0.49
CALD1-203ENST00000393118 HIBADHP31937 336 aaKnown RBP12.02□□□□□ -0.49
CALD1-203ENST00000393118 NEDD4P46934 1319 aa12.02□□□□□ -0.49
CALD1-203ENST00000393118 NLRP12P59046 1061 aa12.02□□□□□ -0.49
CALD1-203ENST00000393118 DYNLL1P63167 89 aaKnown RBP12.02□□□□□ -0.49
CALD1-203ENST00000393118 UBXN4Q92575 508 aa12.02□□□□□ -0.49
CALD1-203ENST00000393118 PAXBP1Q9Y5B6 917 aa12.02□□□□□ -0.49
CALD1-203ENST00000393118 KRT2P35908 639 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 NR5A1Q13285 461 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms