RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 FAM198AQ9UFP1 575 aa20.34■□□□□ 0.85
ERCC2-202ENST00000391942 EIF5BO60841 1220 aaKnown RBP20.33■□□□□ 0.85
ERCC2-202ENST00000391942 ANGEL2Q5VTE6 544 aaKnown RBP20.33■□□□□ 0.85
ERCC2-202ENST00000391942 ZFPM1Q8IX07 1006 aa20.33■□□□□ 0.85
ERCC2-202ENST00000391942 IDI2Q9BXS1 227 aa20.33■□□□□ 0.85
ERCC2-202ENST00000391942 MCM9Q9NXL9 1143 aa20.33■□□□□ 0.85
ERCC2-202ENST00000391942 GGA3Q9NZ52 723 aa20.33■□□□□ 0.85
ERCC2-202ENST00000391942 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.85
ERCC2-202ENST00000391942 RPAP1Q9BWH6 1393 aaPredicted RBP20.33■□□□□ 0.84
ERCC2-202ENST00000391942 CYP2D7A0A087X1C5 515 aa20.32■□□□□ 0.84
ERCC2-202ENST00000391942 CYP2D6P10635 497 aa20.32■□□□□ 0.84
ERCC2-202ENST00000391942 USP50Q70EL3 339 aaPredicted RBP20.32■□□□□ 0.84
ERCC2-202ENST00000391942 NMRK2Q9NPI5 230 aa20.32■□□□□ 0.84
ERCC2-202ENST00000391942 MKRN1Q9UHC7 482 aaKnown RBP20.32■□□□□ 0.84
ERCC2-202ENST00000391942 MYH1P12882 1939 aa20.32■□□□□ 0.84
ERCC2-202ENST00000391942 MINDY4BA8MYZ0 360 aa20.31■□□□□ 0.84
ERCC2-202ENST00000391942 USP17L12C9JPN9 530 aa20.31■□□□□ 0.84
ERCC2-202ENST00000391942 USP17L21D6R901 530 aa20.31■□□□□ 0.84
ERCC2-202ENST00000391942 HAND2P61296 217 aa20.31■□□□□ 0.84
ERCC2-202ENST00000391942 EVX2Q03828 476 aa20.31■□□□□ 0.84
ERCC2-202ENST00000391942 ALX1Q15699 326 aa20.31■□□□□ 0.84
ERCC2-202ENST00000391942 GIMAP6Q6P9H5 292 aa20.31■□□□□ 0.84
ERCC2-202ENST00000391942 CTR9Q6PD62 1173 aa20.31■□□□□ 0.84
ERCC2-202ENST00000391942 OSBPL5Q9H0X9 879 aaPredicted RBP20.31■□□□□ 0.84
ERCC2-202ENST00000391942 UPF2Q9HAU5 1272 aaKnown RBP20.31■□□□□ 0.84
ERCC2-202ENST00000391942 PALD1Q9ULE6 856 aa20.31■□□□□ 0.84
ERCC2-202ENST00000391942 SMIM22K7EJ46 135 aa20.3■□□□□ 0.84
ERCC2-202ENST00000391942 POLR3DP05423 398 aaPredicted RBP20.3■□□□□ 0.84
ERCC2-202ENST00000391942 VEGFAP15692 232 aaPredicted RBP20.3■□□□□ 0.84
ERCC2-202ENST00000391942 STK11IPQ8N1F8 1099 aa20.3■□□□□ 0.84
ERCC2-202ENST00000391942 CTNNA3Q9UI47 895 aa20.3■□□□□ 0.84
ERCC2-202ENST00000391942 DDX60LQ5H9U9 1706 aaKnown RBP20.3■□□□□ 0.84
ERCC2-202ENST00000391942 CNTNAP1P78357 1384 aa20.3■□□□□ 0.84
ERCC2-202ENST00000391942 ZSCAN29Q8IWY8 852 aaPredicted RBP20.3■□□□□ 0.84
ERCC2-202ENST00000391942 ENTPD3O75355 529 aa20.29■□□□□ 0.84
ERCC2-202ENST00000391942 NECTIN1Q15223 517 aa20.29■□□□□ 0.84
ERCC2-202ENST00000391942 CREB3L3Q68CJ9 461 aa20.29■□□□□ 0.84
ERCC2-202ENST00000391942 TMEM39BQ9GZU3 492 aa20.29■□□□□ 0.84
ERCC2-202ENST00000391942 ARPP21Q9UBL0 812 aaPredicted RBP20.29■□□□□ 0.84
ERCC2-202ENST00000391942 ZMYM6O95789 1325 aa20.29■□□□□ 0.84
ERCC2-202ENST00000391942 LAMB1P07942 1786 aa20.29■□□□□ 0.84
ERCC2-202ENST00000391942 DDTLA6NHG4 134 aaPredicted RBP20.28■□□□□ 0.84
ERCC2-202ENST00000391942 SLC27A2O14975 620 aa20.28■□□□□ 0.84
ERCC2-202ENST00000391942 POTEIP0CG38 1075 aa20.28■□□□□ 0.84
ERCC2-202ENST00000391942 POTEJP0CG39 1038 aa20.28■□□□□ 0.84
ERCC2-202ENST00000391942 HSPA4P34932 840 aa20.28■□□□□ 0.84
ERCC2-202ENST00000391942 TNNI2P48788 182 aa20.28■□□□□ 0.84
ERCC2-202ENST00000391942 CTDSPL2Q05D32 466 aa20.28■□□□□ 0.84
ERCC2-202ENST00000391942 RASA3Q14644 834 aa20.28■□□□□ 0.84
ERCC2-202ENST00000391942 IMMTQ16891 758 aaKnown RBP20.28■□□□□ 0.84
ERCC2-202ENST00000391942 FKBP1CQ5VVH2 108 aa20.28■□□□□ 0.84
ERCC2-202ENST00000391942 SH3BP5LQ7L8J4 393 aa20.28■□□□□ 0.84
ERCC2-202ENST00000391942 PNMA8AQ86V59 439 aaPredicted RBP20.28■□□□□ 0.84
ERCC2-202ENST00000391942 APOBEC3FQ8IUX4 373 aaKnown RBP20.28■□□□□ 0.84
ERCC2-202ENST00000391942 AMOTL1Q8IY63 956 aa20.28■□□□□ 0.84
ERCC2-202ENST00000391942 FAM151AQ8WW52 585 aa20.28■□□□□ 0.84
ERCC2-202ENST00000391942 C22orf23Q9BZE7 217 aa20.28■□□□□ 0.84
ERCC2-202ENST00000391942 CLEC11AQ9Y240 323 aa20.28■□□□□ 0.84
ERCC2-202ENST00000391942 TAF6LQ9Y6J9 622 aa20.28■□□□□ 0.84
ERCC2-202ENST00000391942 POLR2AP24928 1970 aaKnown RBP20.27■□□□□ 0.84
ERCC2-202ENST00000391942 LAMA4Q16363 1823 aa20.27■□□□□ 0.84
ERCC2-202ENST00000391942 ZNF213O14771 459 aa20.27■□□□□ 0.84
ERCC2-202ENST00000391942 NPM3O75607 178 aaKnown RBP20.27■□□□□ 0.84
ERCC2-202ENST00000391942 CYP21A2P08686 494 aa20.27■□□□□ 0.84
ERCC2-202ENST00000391942 MCCP23508 829 aa20.27■□□□□ 0.84
ERCC2-202ENST00000391942 PLCD1P51178 756 aa20.27■□□□□ 0.84
ERCC2-202ENST00000391942 PPARAQ07869 468 aa20.27■□□□□ 0.84
ERCC2-202ENST00000391942 TNFAIP1Q13829 316 aa20.27■□□□□ 0.84
ERCC2-202ENST00000391942 CDAN1Q8IWY9 1227 aa20.27■□□□□ 0.84
ERCC2-202ENST00000391942 DCPSQ96C86 337 aaKnown RBP20.27■□□□□ 0.84
ERCC2-202ENST00000391942 EPB41L2O43491 1005 aaKnown RBP20.26■□□□□ 0.83
ERCC2-202ENST00000391942 SBK1Q52WX2 424 aa20.26■□□□□ 0.83
ERCC2-202ENST00000391942 C12orf60Q5U649 245 aa20.26■□□□□ 0.83
ERCC2-202ENST00000391942 FAM83AQ86UY5 434 aa20.26■□□□□ 0.83
ERCC2-202ENST00000391942 RASEFQ8IZ41 740 aa20.26■□□□□ 0.83
ERCC2-202ENST00000391942 NBPF3Q9H094 633 aa20.26■□□□□ 0.83
ERCC2-202ENST00000391942 DEFB129Q9H1M3 183 aa20.26■□□□□ 0.83
ERCC2-202ENST00000391942 RNF20Q5VTR2 975 aa20.25■□□□□ 0.83
ERCC2-202ENST00000391942 PRAMEF18Q5VWM3 479 aa20.25■□□□□ 0.83
ERCC2-202ENST00000391942 TBC1D10CQ8IV04 446 aa20.25■□□□□ 0.83
ERCC2-202ENST00000391942 DYNLL2Q96FJ2 89 aa20.25■□□□□ 0.83
ERCC2-202ENST00000391942 INCENPQ9NQS7 918 aa20.25■□□□□ 0.83
ERCC2-202ENST00000391942 PITPNM2Q9BZ72 1349 aa20.25■□□□□ 0.83
ERCC2-202ENST00000391942 ADM5C9JUS6 153 aa20.24■□□□□ 0.83
ERCC2-202ENST00000391942 HLA-DOAP06340 250 aa20.24■□□□□ 0.83
ERCC2-202ENST00000391942 SLURP2P0DP57 97 aa20.24■□□□□ 0.83
ERCC2-202ENST00000391942 DLK2Q6UY11 383 aa20.24■□□□□ 0.83
ERCC2-202ENST00000391942 TTC6Q86TZ1 520 aa20.24■□□□□ 0.83
ERCC2-202ENST00000391942 CSRNP1Q96S65 589 aa20.24■□□□□ 0.83
ERCC2-202ENST00000391942 SULF1Q8IWU6 871 aa20.24■□□□□ 0.83
ERCC2-202ENST00000391942 ZC3H15Q8WU90 426 aaKnown RBP20.24■□□□□ 0.83
ERCC2-202ENST00000391942 DHX36Q9H2U1 1008 aaKnown RBP20.24■□□□□ 0.83
ERCC2-202ENST00000391942 GPBP1L1Q9HC44 474 aaPredicted RBP20.24■□□□□ 0.83
ERCC2-202ENST00000391942 SNX14Q9Y5W7 946 aa20.24■□□□□ 0.83
ERCC2-202ENST00000391942 TACC3Q9Y6A5 838 aa20.24■□□□□ 0.83
ERCC2-202ENST00000391942 ATRNL1Q5VV63 1379 aa20.23■□□□□ 0.83
ERCC2-202ENST00000391942 SIPA1L1O43166 1804 aa20.23■□□□□ 0.83
ERCC2-202ENST00000391942 FAM196BA6NMK8 535 aa20.23■□□□□ 0.83
ERCC2-202ENST00000391942 ZKSCAN1P17029 563 aaPredicted RBP20.23■□□□□ 0.83
ERCC2-202ENST00000391942 KRT26Q7Z3Y9 468 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms