RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 EHD4Q9H223 541 aa3.87□□□□□ -1.79
SNORA40.19-201ENST00000390846 KRT82Q9NSB4 513 aa3.87□□□□□ -1.79
SNORA40.19-201ENST00000390846 VAV3Q9UKW4 847 aa3.87□□□□□ -1.79
SNORA40.19-201ENST00000390846 SLC5A6Q9Y289 635 aa3.87□□□□□ -1.79
SNORA40.19-201ENST00000390846 H3BRB1 525 aa3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 CYP27A1Q02318 531 aa3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 ID3Q02535 119 aa3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 PRKCQQ04759 706 aa3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 AP3B2Q13367 1082 aa3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 AAMPQ13685 434 aa3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 SPACA3Q8IXA5 215 aa3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 SMYD4Q8IYR2 804 aaPredicted RBP3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 GRIN3AQ8TCU5 1115 aa3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 NETO1Q8TDF5 533 aa3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 CSRNP1Q96S65 589 aa3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 RBCK1Q9BYM8 510 aa3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 DNAJC25Q9H1X3 360 aa3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 TUT1Q9H6E5 874 aaKnown RBP3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 MKNK2Q9HBH9 465 aa3.86□□□□□ -1.79
SNORA40.19-201ENST00000390846 PAGE1O75459 146 aa3.85□□□□□ -1.79
SNORA40.19-201ENST00000390846 EOMESO95936 686 aa3.85□□□□□ -1.79
SNORA40.19-201ENST00000390846 HCLS1P14317 486 aaPredicted RBP3.85□□□□□ -1.79
SNORA40.19-201ENST00000390846 PTPN11Q06124 597 aaPredicted RBP3.85□□□□□ -1.79
SNORA40.19-201ENST00000390846 FBLN7Q53RD9 439 aa3.85□□□□□ -1.79
SNORA40.19-201ENST00000390846 FYB2Q5VWT5 728 aa3.85□□□□□ -1.79
SNORA40.19-201ENST00000390846 CITED4Q96RK1 184 aa3.85□□□□□ -1.79
SNORA40.19-201ENST00000390846 SETDB2Q96T68 719 aa3.85□□□□□ -1.79
SNORA40.19-201ENST00000390846 YIPF2Q9BWQ6 316 aa3.85□□□□□ -1.79
SNORA40.19-201ENST00000390846 PRDM7Q9NQW5 492 aa3.85□□□□□ -1.79
SNORA40.19-201ENST00000390846 RAD18Q9NS91 495 aa3.85□□□□□ -1.79
SNORA40.19-201ENST00000390846 LOC105371045A0A1W2PR82 267 aa3.84□□□□□ -1.79
SNORA40.19-201ENST00000390846 ENC1O14682 589 aa3.84□□□□□ -1.79
SNORA40.19-201ENST00000390846 EIF4EBP3O60516 100 aaPredicted RBP3.84□□□□□ -1.79
SNORA40.19-201ENST00000390846 CEACAM5P06731 702 aa3.84□□□□□ -1.79
SNORA40.19-201ENST00000390846 RANGAP1P46060 587 aaPredicted RBP3.84□□□□□ -1.79
SNORA40.19-201ENST00000390846 PLCL1Q15111 1095 aa3.84□□□□□ -1.79
SNORA40.19-201ENST00000390846 TMC7Q7Z402 723 aa3.84□□□□□ -1.79
SNORA40.19-201ENST00000390846 TTC16Q8NEE8 873 aa3.84□□□□□ -1.79
SNORA40.19-201ENST00000390846 FLAD1Q8NFF5 587 aa3.84□□□□□ -1.79
SNORA40.19-201ENST00000390846 GPBAR1Q8TDU6 330 aa3.84□□□□□ -1.79
SNORA40.19-201ENST00000390846 MISP3Q96FF7 219 aa3.84□□□□□ -1.79
SNORA40.19-201ENST00000390846 KRTAP9-3Q9BYQ3 159 aa3.84□□□□□ -1.79
SNORA40.19-201ENST00000390846 KRTAP4-5Q9BYR2 181 aa3.84□□□□□ -1.79
SNORA40.19-201ENST00000390846 BRPF3Q9ULD4 1205 aa3.84□□□□□ -1.79
SNORA40.19-201ENST00000390846 ARNTP27540 789 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 ERVK-24P63145 666 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 PDE3AQ14432 1141 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 AOC3Q16853 763 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 STK11IPQ8N1F8 1099 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 RNF214Q8ND24 703 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 TMEM40Q8WWA1 233 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 FAM168AQ92567 244 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 NECAB3Q96P71 396 aaPredicted RBP3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 ARID3AQ99856 593 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 BCO2Q9BYV7 579 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 OSBPL7Q9BZF2 842 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 ATXN3LQ9H3M9 355 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 SEMA3GQ9NS98 782 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 PCOLCE2Q9UKZ9 415 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 USTQ9Y2C2 406 aa3.83□□□□□ -1.8
SNORA40.19-201ENST00000390846 DBX1A6NMT0 343 aa3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 PRR33A8MZF0 331 aa3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 IGF2BP3O00425 579 aaKnown RBP eCLIP3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 CDK8P49336 464 aa3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 FCGRTP55899 365 aa3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 IFI16Q16666 785 aaKnown RBP3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 CYP27C1Q4G0S4 372 aa3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 PPM1JQ5JR12 505 aa3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 NXPE4Q6UWF7 544 aa3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 LCNL1Q6ZST4 164 aa3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 TOP6BLQ8N6T0 577 aa3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 KRTAP17-1Q9BYP8 105 aa3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 SP110Q9HB58 689 aa3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 RC3H2Q9HBD1 1191 aaKnown RBP3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 TMEM39AQ9NV64 488 aa3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 CTNND2Q9UQB3 1225 aa3.82□□□□□ -1.8
SNORA40.19-201ENST00000390846 PITPNM2Q9BZ72 1349 aa3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 SOWAHDA6NJG2 315 aa3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 SLITRK5O94991 958 aa3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 NME2P22392 152 aa3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 INPP5AQ14642 412 aa3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 ENOX2Q16206 610 aaKnown RBP3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 SLC23A3Q6PIS1 610 aa3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 GLYCTKQ8IVS8 523 aa3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 SULF2Q8IWU5 870 aa3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 RIN3Q8TB24 985 aa3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 ANKRD24Q8TF21 1146 aa3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 FBRSQ9HAH7 460 aa3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 KCNK12Q9HB15 430 aa3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 ZFYVE1Q9HBF4 777 aa3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 SNX11Q9Y5W9 270 aa3.81□□□□□ -1.8
SNORA40.19-201ENST00000390846 TREHO43280 583 aa3.8□□□□□ -1.8
SNORA40.19-201ENST00000390846 SLFN14P0C7P3 912 aa3.8□□□□□ -1.8
SNORA40.19-201ENST00000390846 CFPP27918 469 aa3.8□□□□□ -1.8
SNORA40.19-201ENST00000390846 SLBPQ14493 270 aaKnown RBP eCLIP3.8□□□□□ -1.8
SNORA40.19-201ENST00000390846 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.8□□□□□ -1.8
SNORA40.19-201ENST00000390846 HP1BP3Q5SSJ5 553 aaPredicted RBP3.8□□□□□ -1.8
SNORA40.19-201ENST00000390846 ZBTB37Q5TC79 503 aa3.8□□□□□ -1.8
SNORA40.19-201ENST00000390846 ST14Q9Y5Y6 855 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms