RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ZNRF3Q9ULT6 936 aa8.14□□□□□ -1.11
RNU6-40P-201ENST00000384254 DDX3YO15523 660 aaKnown RBP8.13□□□□□ -1.11
RNU6-40P-201ENST00000384254 ZNF862O60290 1169 aa8.13□□□□□ -1.11
RNU6-40P-201ENST00000384254 CLCQ05315 142 aa8.13□□□□□ -1.11
RNU6-40P-201ENST00000384254 NFE2L2Q16236 605 aa8.13□□□□□ -1.11
RNU6-40P-201ENST00000384254 KIF4BQ2VIQ3 1234 aa8.13□□□□□ -1.11
RNU6-40P-201ENST00000384254 LRRFIP1Q32MZ4 808 aaKnown RBP8.13□□□□□ -1.11
RNU6-40P-201ENST00000384254 FOXD4L6Q3SYB3 417 aaPredicted RBP8.13□□□□□ -1.11
RNU6-40P-201ENST00000384254 LRFN4Q6PJG9 635 aa8.13□□□□□ -1.11
RNU6-40P-201ENST00000384254 FOXD4L3Q6VB84 417 aaPredicted RBP8.13□□□□□ -1.11
RNU6-40P-201ENST00000384254 FBXO11Q86XK2 927 aa8.13□□□□□ -1.11
RNU6-40P-201ENST00000384254 WHAMMQ8TF30 809 aa8.13□□□□□ -1.11
RNU6-40P-201ENST00000384254 SHDQ96IW2 340 aa8.13□□□□□ -1.11
RNU6-40P-201ENST00000384254 TACC3Q9Y6A5 838 aa8.13□□□□□ -1.11
RNU6-40P-201ENST00000384254 A0A0A0MRY4 1105 aa8.12□□□□□ -1.11
RNU6-40P-201ENST00000384254 PRAMEF27A3QJZ7 478 aa8.12□□□□□ -1.11
RNU6-40P-201ENST00000384254 GNB5O14775 395 aa8.12□□□□□ -1.11
RNU6-40P-201ENST00000384254 DEAF1O75398 565 aaPredicted RBP8.12□□□□□ -1.11
RNU6-40P-201ENST00000384254 TRIM28Q13263 835 aaKnown RBP8.12□□□□□ -1.11
RNU6-40P-201ENST00000384254 ZNF385CQ66K41 422 aaPredicted RBP8.12□□□□□ -1.11
RNU6-40P-201ENST00000384254 PODNQ7Z5L7 613 aa8.12□□□□□ -1.11
RNU6-40P-201ENST00000384254 FMR1NBQ8N0W7 255 aaPredicted RBP8.12□□□□□ -1.11
RNU6-40P-201ENST00000384254 RUSC1Q9BVN2 902 aa8.12□□□□□ -1.11
RNU6-40P-201ENST00000384254 EHMT1Q9H9B1 1298 aa8.12□□□□□ -1.11
RNU6-40P-201ENST00000384254 MKL2Q9ULH7 1088 aa8.12□□□□□ -1.11
RNU6-40P-201ENST00000384254 DCDC2CA8MYV0 355 aa8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 SMAD7O15105 426 aaKnown RBP8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 ADAM11O75078 769 aa8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 AOC2O75106 756 aa8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 ATE1O95260 518 aa8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 CTSBP07858 339 aa8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 GIPRP48546 466 aa8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 COL9A3Q14050 684 aaPredicted RBP8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 PRRT3Q5FWE3 981 aa8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 EXOSC6Q5RKV6 272 aaKnown RBP8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 NUTM2GQ5VZR2 741 aa8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 UBASH3BQ8TF42 649 aa8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 HNRNPLLQ8WVV9 542 aaKnown RBP8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 MRFAP1L1Q96HT8 127 aa8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 CYP4F12Q9HCS2 524 aa8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 SIRPGQ9P1W8 387 aa8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 POLR3KQ9Y2Y1 108 aaPredicted RBP8.11□□□□□ -1.11
RNU6-40P-201ENST00000384254 GFRA2O00451 464 aa8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 HTR3BO95264 441 aa8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 PLCG1P19174 1290 aa8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 CDK8P49336 464 aa8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 ETF1P62495 437 aaKnown RBP8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 ID3Q02535 119 aa8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 INPP5AQ14642 412 aa8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 BMS1Q14692 1282 aaKnown RBP8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 AKAP4Q5JQC9 854 aa8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 ACAD11Q709F0 780 aa8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 WDR89Q96FK6 387 aaPredicted RBP8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 WDR18Q9BV38 432 aa8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 PLVAPQ9BX97 442 aa8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 RNF208Q9H0X6 261 aa8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 KCNK4Q9NYG8 393 aa8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 ACTR10Q9NZ32 417 aa8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 NOP53Q9NZM5 478 aaKnown RBP8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 TMA7Q9Y2S6 64 aaKnown RBP8.1□□□□□ -1.11
RNU6-40P-201ENST00000384254 SYNGAP1Q96PV0 1343 aa8.09□□□□□ -1.11
RNU6-40P-201ENST00000384254 K7ELQ4 463 aaPredicted RBP8.09□□□□□ -1.11
RNU6-40P-201ENST00000384254 DLL1O00548 723 aa8.09□□□□□ -1.11
RNU6-40P-201ENST00000384254 SMARCA5O60264 1052 aaPredicted RBP8.09□□□□□ -1.11
RNU6-40P-201ENST00000384254 CANXP27824 592 aaKnown RBP8.09□□□□□ -1.11
RNU6-40P-201ENST00000384254 RAB33AQ14088 237 aa8.09□□□□□ -1.11
RNU6-40P-201ENST00000384254 TREML4Q6UXN2 200 aa8.09□□□□□ -1.11
RNU6-40P-201ENST00000384254 C12orf40Q86WS4 652 aa8.09□□□□□ -1.11
RNU6-40P-201ENST00000384254 LSRQ86X29 649 aaPredicted RBP8.09□□□□□ -1.11
RNU6-40P-201ENST00000384254 RBBP8NLQ8NC74 664 aaPredicted RBP8.09□□□□□ -1.11
RNU6-40P-201ENST00000384254 MRPL18Q9H0U6 180 aaKnown RBP8.09□□□□□ -1.11
RNU6-40P-201ENST00000384254 CSADQ9Y600 493 aa8.09□□□□□ -1.11
RNU6-40P-201ENST00000384254 TM4SF5O14894 197 aa8.08□□□□□ -1.12
RNU6-40P-201ENST00000384254 PGRP06401 933 aa8.08□□□□□ -1.12
RNU6-40P-201ENST00000384254 ELNP15502 786 aa8.08□□□□□ -1.12
RNU6-40P-201ENST00000384254 ERVK-24P63145 666 aa8.08□□□□□ -1.12
RNU6-40P-201ENST00000384254 PPP2R5EQ16537 467 aa8.08□□□□□ -1.12
RNU6-40P-201ENST00000384254 ZC3H12AQ5D1E8 599 aaKnown RBP8.08□□□□□ -1.12
RNU6-40P-201ENST00000384254 ILDR2Q71H61 639 aa8.08□□□□□ -1.12
RNU6-40P-201ENST00000384254 CYFIP1Q7L576 1253 aa8.08□□□□□ -1.12
RNU6-40P-201ENST00000384254 ZNF775Q96BV0 537 aaPredicted RBP8.08□□□□□ -1.12
RNU6-40P-201ENST00000384254 TRIM11Q96F44 468 aa8.08□□□□□ -1.12
RNU6-40P-201ENST00000384254 ATXN3LQ9H3M9 355 aa8.08□□□□□ -1.12
RNU6-40P-201ENST00000384254 GMIPQ9P107 970 aa8.08□□□□□ -1.12
RNU6-40P-201ENST00000384254 REV1Q9UBZ9 1251 aa8.08□□□□□ -1.12
RNU6-40P-201ENST00000384254 AP4E1Q9UPM8 1137 aa8.08□□□□□ -1.12
RNU6-40P-201ENST00000384254 PRR36Q9H6K5 1346 aa8.07□□□□□ -1.12
RNU6-40P-201ENST00000384254 GRK4P32298 578 aa8.07□□□□□ -1.12
RNU6-40P-201ENST00000384254 LARP1BQ659C4 914 aaKnown RBP8.07□□□□□ -1.12
RNU6-40P-201ENST00000384254 FDX2Q6P4F2 183 aa8.07□□□□□ -1.12
RNU6-40P-201ENST00000384254 IGF2-ASQ6U949 168 aa8.07□□□□□ -1.12
RNU6-40P-201ENST00000384254 TMEM40Q8WWA1 233 aa8.07□□□□□ -1.12
RNU6-40P-201ENST00000384254 MKL1Q969V6 931 aa8.07□□□□□ -1.12
RNU6-40P-201ENST00000384254 TM9SF2Q99805 663 aa8.07□□□□□ -1.12
RNU6-40P-201ENST00000384254 ADAM30Q9UKF2 790 aa8.07□□□□□ -1.12
RNU6-40P-201ENST00000384254 HIF3AQ9Y2N7 669 aa8.07□□□□□ -1.12
RNU6-40P-201ENST00000384254 CORINQ9Y5Q5 1042 aa8.07□□□□□ -1.12
RNU6-40P-201ENST00000384254 MEGF11A6BM72 1044 aa8.06□□□□□ -1.12
RNU6-40P-201ENST00000384254 KLF4O43474 513 aa8.06□□□□□ -1.12
RNU6-40P-201ENST00000384254 DLGAP3O95886 979 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms