RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 DPEP1P16444 411 aa12.88□□□□□ -0.35
FAM239A-201ENST00000381108 SYT1P21579 422 aa12.88□□□□□ -0.35
FAM239A-201ENST00000381108 USP5P45974 858 aa12.88□□□□□ -0.35
FAM239A-201ENST00000381108 CTR9Q6PD62 1173 aa12.88□□□□□ -0.35
FAM239A-201ENST00000381108 STAG1Q8WVM7 1258 aa12.88□□□□□ -0.35
FAM239A-201ENST00000381108 KCNQ5Q9NR82 932 aa12.88□□□□□ -0.35
FAM239A-201ENST00000381108 FAM205AQ6ZU69 1335 aa12.88□□□□□ -0.35
FAM239A-201ENST00000381108 LAMB1P07942 1786 aa12.88□□□□□ -0.35
FAM239A-201ENST00000381108 GOLGA8BA8MQT2 603 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 PRDM1O75626 825 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 BAG4O95429 457 aaKnown RBP12.87□□□□□ -0.35
FAM239A-201ENST00000381108 BAG3O95817 575 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 BTDP43251 543 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 AOC3Q16853 763 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 CERS5Q8N5B7 392 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 TTLL6Q8N841 843 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 C7orf43Q8WVR3 580 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 ZKSCAN3Q9BRR0 538 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 RTFDC1Q9BY42 306 aaPredicted RBP12.87□□□□□ -0.35
FAM239A-201ENST00000381108 CNNM2Q9H8M5 875 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 ZSWIM5Q9P217 1185 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 STX6O43752 255 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 PFKFB2O60825 505 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 LDHCP07864 332 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 CYP2D6P10635 497 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 PDIA3P30101 505 aaKnown RBP12.87□□□□□ -0.35
FAM239A-201ENST00000381108 TMEM132AQ24JP5 1023 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 TMED8Q6PL24 325 aaPredicted RBP12.87□□□□□ -0.35
FAM239A-201ENST00000381108 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 DDX11Q96FC9 970 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 KRT23Q9C075 422 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 SENP2Q9HC62 589 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 ATP8A2Q9NTI2 1148 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 MCM9Q9NXL9 1143 aa12.87□□□□□ -0.35
FAM239A-201ENST00000381108 ANGEL1Q9UNK9 670 aaKnown RBP12.87□□□□□ -0.35
FAM239A-201ENST00000381108 VPS37CA5D8V6 355 aaPredicted RBP12.86□□□□□ -0.35
FAM239A-201ENST00000381108 ECE2O60344 883 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 MCTP1Q6DN14 999 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 TGFBRAP1Q8WUH2 860 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 RNF41Q9H4P4 317 aaPredicted RBP12.86□□□□□ -0.35
FAM239A-201ENST00000381108 WDR33Q9C0J8 1336 aaKnown RBP12.86□□□□□ -0.35
FAM239A-201ENST00000381108 ADAMTSL1Q8N6G6 1762 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 NAV1Q8NEY1 1877 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 SCN9AQ15858 1988 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 PSDA5PKW4 1024 aaPredicted RBP12.86□□□□□ -0.35
FAM239A-201ENST00000381108 SH2B2O14492 632 aaPredicted RBP12.86□□□□□ -0.35
FAM239A-201ENST00000381108 USP17L8P0C7I0 530 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 RXRAP19793 462 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 KCNA3P22001 575 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 POLD1P28340 1107 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 SCNN1DP51172 638 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 TMEM67Q5HYA8 995 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 GIMAP6Q6P9H5 292 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 FBXL16Q8N461 479 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 WDR19Q8NEZ3 1342 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 SPOCK2Q92563 424 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 ZNF274Q96GC6 653 aaPredicted RBP12.86□□□□□ -0.35
FAM239A-201ENST00000381108 CDK5RAP2Q96SN8 1893 aa12.86□□□□□ -0.35
FAM239A-201ENST00000381108 TTF2Q9UNY4 1162 aaKnown RBP12.86□□□□□ -0.35
FAM239A-201ENST00000381108 SNED1Q8TER0 1413 aa12.85□□□□□ -0.35
FAM239A-201ENST00000381108 GOLGA6L22H0YM25 854 aa12.85□□□□□ -0.35
FAM239A-201ENST00000381108 IFIT3O14879 490 aaKnown RBP12.85□□□□□ -0.35
FAM239A-201ENST00000381108 LARP1BQ659C4 914 aaKnown RBP12.85□□□□□ -0.35
FAM239A-201ENST00000381108 NFXL1Q6ZNB6 911 aa12.85□□□□□ -0.35
FAM239A-201ENST00000381108 MAPKAPK5Q8IW41 473 aa12.85□□□□□ -0.35
FAM239A-201ENST00000381108 MTFR1LQ9H019 292 aa12.85□□□□□ -0.35
FAM239A-201ENST00000381108 ARPP21Q9UBL0 812 aaPredicted RBP12.85□□□□□ -0.35
FAM239A-201ENST00000381108 ANAPC4Q9UJX5 808 aa12.85□□□□□ -0.35
FAM239A-201ENST00000381108 KIF13BQ9NQT8 1826 aa12.85□□□□□ -0.35
FAM239A-201ENST00000381108 PPIP5K2O43314 1243 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 TRAK2O60296 914 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 FOSBP53539 338 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 CLEC17AQ6ZS10 378 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 PODNQ7Z5L7 613 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 MICU3Q86XE3 530 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 SLF2Q8IX21 1173 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 CCDC144CPQ8IYA2 1237 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 TEX11Q8IYF3 940 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 TMEM87BQ96K49 555 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 MYL10Q9BUA6 226 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 SAP30BPQ9UHR5 308 aaKnown RBP12.84□□□□□ -0.35
FAM239A-201ENST00000381108 GPR75-ASB3A0A0A6YYF3 556 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 PTPDC1A2A3K4 754 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 RANBP6O60518 1105 aaKnown RBP12.84□□□□□ -0.35
FAM239A-201ENST00000381108 CTDNEP1O95476 244 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 ZSCAN22P10073 491 aaPredicted RBP12.84□□□□□ -0.35
FAM239A-201ENST00000381108 NSUN7Q8NE18 718 aaKnown RBP12.84□□□□□ -0.35
FAM239A-201ENST00000381108 IGDCC4Q8TDY8 1250 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 ESR2Q92731 530 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 UPF1Q92900 1129 aaKnown RBP eCLIP12.84□□□□□ -0.35
FAM239A-201ENST00000381108 LY9Q9HBG7 655 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 DAGLAQ9Y4D2 1042 aa12.84□□□□□ -0.35
FAM239A-201ENST00000381108 IGSF3O75054 1194 aa12.83□□□□□ -0.36
FAM239A-201ENST00000381108 EVCP57679 992 aa12.83□□□□□ -0.36
FAM239A-201ENST00000381108 PPP4CP60510 307 aa12.83□□□□□ -0.36
FAM239A-201ENST00000381108 CCDC93Q567U6 631 aa12.83□□□□□ -0.36
FAM239A-201ENST00000381108 KIAA0825Q8IV33 1275 aa12.83□□□□□ -0.36
FAM239A-201ENST00000381108 FAM184AQ8NB25 1140 aa12.83□□□□□ -0.36
FAM239A-201ENST00000381108 UBAC1Q9BSL1 405 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms