RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 IGHMBP2P38935 993 aaKnown RBP18.77■□□□□ 0.6
NKX3-1-201ENST00000380871 FANCCQ00597 558 aa18.77■□□□□ 0.6
NKX3-1-201ENST00000380871 FBXL16Q8N461 479 aa18.77■□□□□ 0.6
NKX3-1-201ENST00000380871 SPATA5Q8NB90 893 aa18.77■□□□□ 0.6
NKX3-1-201ENST00000380871 MORC2Q9Y6X9 1032 aaPredicted RBP18.77■□□□□ 0.6
NKX3-1-201ENST00000380871 PLEKHG2Q9H7P9 1386 aa18.77■□□□□ 0.6
NKX3-1-201ENST00000380871 SHC4Q6S5L8 630 aa18.77■□□□□ 0.6
NKX3-1-201ENST00000380871 BRAPQ7Z569 592 aa18.77■□□□□ 0.6
NKX3-1-201ENST00000380871 VPS37DQ86XT2 251 aa18.77■□□□□ 0.6
NKX3-1-201ENST00000380871 LPIN2Q92539 896 aa18.77■□□□□ 0.6
NKX3-1-201ENST00000380871 IMPACTQ9P2X3 320 aa18.77■□□□□ 0.6
NKX3-1-201ENST00000380871 FBXO3Q9UK99 471 aa18.77■□□□□ 0.6
NKX3-1-201ENST00000380871 CDC27P30260 824 aa18.76■□□□□ 0.59
NKX3-1-201ENST00000380871 ZNF771Q7L3S4 317 aaPredicted RBP18.76■□□□□ 0.59
NKX3-1-201ENST00000380871 ALG1Q9BT22 464 aa18.76■□□□□ 0.59
NKX3-1-201ENST00000380871 DHX16O60231 1041 aaKnown RBP18.76■□□□□ 0.59
NKX3-1-201ENST00000380871 VGLL2Q8N8G2 317 aa18.76■□□□□ 0.59
NKX3-1-201ENST00000380871 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.76■□□□□ 0.59
NKX3-1-201ENST00000380871 BPIFA3Q9BQP9 254 aa18.76■□□□□ 0.59
NKX3-1-201ENST00000380871 JAG2Q9Y219 1238 aa18.76■□□□□ 0.59
NKX3-1-201ENST00000380871 SPATA31A1Q5TZJ5 1347 aa18.76■□□□□ 0.59
NKX3-1-201ENST00000380871 ERVV-1B6SEH8 477 aa18.76■□□□□ 0.59
NKX3-1-201ENST00000380871 FANCGO15287 622 aa18.76■□□□□ 0.59
NKX3-1-201ENST00000380871 CMA1P23946 247 aa18.76■□□□□ 0.59
NKX3-1-201ENST00000380871 SPECC1Q5M775 1068 aa18.76■□□□□ 0.59
NKX3-1-201ENST00000380871 NAPBQ9H115 298 aa18.76■□□□□ 0.59
NKX3-1-201ENST00000380871 TMEM232C9JQI7 657 aa18.75■□□□□ 0.59
NKX3-1-201ENST00000380871 SYKP43405 635 aa18.75■□□□□ 0.59
NKX3-1-201ENST00000380871 CCDC150Q8NCX0 1101 aa18.75■□□□□ 0.59
NKX3-1-201ENST00000380871 NGLY1Q96IV0 654 aa18.75■□□□□ 0.59
NKX3-1-201ENST00000380871 GYG1P46976 350 aa18.75■□□□□ 0.59
NKX3-1-201ENST00000380871 SLC39A14Q15043 492 aa18.75■□□□□ 0.59
NKX3-1-201ENST00000380871 CHMP4CQ96CF2 233 aa18.75■□□□□ 0.59
NKX3-1-201ENST00000380871 MINDY4BA8MYZ0 360 aa18.74■□□□□ 0.59
NKX3-1-201ENST00000380871 FOXN1O15353 648 aa18.74■□□□□ 0.59
NKX3-1-201ENST00000380871 TDO2P48775 406 aa18.74■□□□□ 0.59
NKX3-1-201ENST00000380871 MAP3K12Q12852 859 aa18.74■□□□□ 0.59
NKX3-1-201ENST00000380871 GNL2Q13823 731 aaKnown RBP18.74■□□□□ 0.59
NKX3-1-201ENST00000380871 TTF1Q15361 905 aaPredicted RBP18.74■□□□□ 0.59
NKX3-1-201ENST00000380871 KRT40Q6A162 431 aa18.74■□□□□ 0.59
NKX3-1-201ENST00000380871 KCND1Q9NSA2 647 aa18.74■□□□□ 0.59
NKX3-1-201ENST00000380871 METAP2P50579 478 aaKnown RBP eCLIP18.74■□□□□ 0.59
NKX3-1-201ENST00000380871 CCDC152Q4G0S7 254 aa18.74■□□□□ 0.59
NKX3-1-201ENST00000380871 HOMER1Q86YM7 354 aa18.74■□□□□ 0.59
NKX3-1-201ENST00000380871 CAMTA2O94983 1202 aa18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 KIF20AO95235 890 aa18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 UQCRFS1P1P0C7P4 283 aa18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 C3orf67Q6ZVT6 689 aa18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 CMTR1Q8N1G2 835 aaKnown RBP18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 RAI14Q9P0K7 980 aa18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 SLFN14P0C7P3 912 aa18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 CHRNDQ07001 517 aa18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 SLC4A8Q2Y0W8 1093 aa18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 ERFEQ4G0M1 354 aa18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 DNAI1Q9UI46 699 aa18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 SMIM22K7EJ46 135 aa18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 FOXP4Q8IVH2 680 aaPredicted RBP18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 L2HGDHQ9H9P8 463 aa18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 ANGEL1Q9UNK9 670 aaKnown RBP18.73■□□□□ 0.59
NKX3-1-201ENST00000380871 UBR2Q8IWV8 1755 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 SERPINC1P01008 464 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 UBASH3AP57075 661 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 PTPAQ15257 358 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 CFAP100Q494V2 611 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 LONRF3Q496Y0 759 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 KRT222Q8N1A0 295 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 C4AP0C0L4 1744 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 C4BP0C0L5 1744 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 RANBP6O60518 1105 aaKnown RBP18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 TMEM67Q5HYA8 995 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 APOA5Q6Q788 366 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 METTL16Q86W50 562 aaKnown RBP18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 FAM177A1Q8N128 213 aaPredicted RBP18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 TMX1Q9H3N1 280 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 SLC4A4Q9Y6R1 1079 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 ZMYM6O95789 1325 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 SHANK3Q9BYB0 1731 aa18.72■□□□□ 0.59
NKX3-1-201ENST00000380871 IFIT3O14879 490 aaKnown RBP18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 PDE4BQ07343 736 aa18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 STRBPQ96SI9 672 aaKnown RBP18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 FANCLQ9NW38 375 aa18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 SPEF2Q9C093 1822 aa18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 TPM4P67936 248 aa18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 CCDC93Q567U6 631 aa18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 LCORLQ8N3X6 602 aa18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 SDR42E1Q8WUS8 393 aa18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 SRP68Q9UHB9 627 aaKnown RBP18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 HPSEQ9Y251 543 aa18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 DISP2A7MBM2 1401 aa18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 MROH5Q6ZUA9 1318 aa18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 PSDA5PKW4 1024 aaPredicted RBP18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 ATP2B1P20020 1258 aa18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 BMP6P22004 513 aa18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 MAP3K14Q99558 947 aa18.71■□□□□ 0.59
NKX3-1-201ENST00000380871 SH2B2O14492 632 aaPredicted RBP18.7■□□□□ 0.58
NKX3-1-201ENST00000380871 CYP7A1P22680 504 aa18.7■□□□□ 0.58
NKX3-1-201ENST00000380871 GRIN1Q05586 938 aa18.7■□□□□ 0.58
NKX3-1-201ENST00000380871 IFNL3Q8IZI9 196 aa18.7■□□□□ 0.58
NKX3-1-201ENST00000380871 NUP133Q8WUM0 1156 aa18.7■□□□□ 0.58
NKX3-1-201ENST00000380871 TUBE1Q9UJT0 475 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms