RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 KIAA1468Q9P260 1216 aa12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 HPS5Q9UPZ3 1129 aa12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 PATL2C9JE40 543 aaKnown RBP12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 TPM3P06753 285 aa12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 EVX2Q03828 476 aa12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 CEP135Q66GS9 1140 aa12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 ADALQ6DHV7 355 aa12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 OXER1Q8TDS5 423 aa12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 PDCL3Q9H2J4 239 aa12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 MCM9Q9NXL9 1143 aa12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 ERCC3P19447 782 aa12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 ITPK1Q13572 414 aa12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 ILDR1Q86SU0 546 aaPredicted RBP12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 SLC51AQ86UW1 340 aa12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 SMYD4Q8IYR2 804 aaPredicted RBP12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 U2AF2P26368 475 aaKnown RBP eCLIP12.59□□□□□ -0.397e-6■□□□□ 9.6
DNMT3A-203ENST00000380746 NLRP5P59047 1200 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 GRIN1Q05586 938 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 IQCA1Q86XH1 822 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 CELF1Q92879 486 aaKnown RBP12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 SECISBP2LQ93073 1101 aaKnown RBP12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 SETDB2Q96T68 719 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 BCL2L12Q9HB09 334 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 MKNK2Q9HBH9 465 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 KCNH3Q9ULD8 1083 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 ZNF652Q9Y2D9 606 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 G3V3G9 751 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 KLRK1P26718 216 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 DCAF8Q5TAQ9 597 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 EPB41L4AQ9HCS5 686 aaPredicted RBP12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 LMTK3Q96Q04 1460 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 VWA3AA6NCI4 1184 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 DYNC1I1O14576 645 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 CYP2D6P10635 497 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 MCM7P33993 719 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 C3orf67Q6ZVT6 689 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 CPVLQ9H3G5 476 aa12.59□□□□□ -0.39
DNMT3A-203ENST00000380746 CAMTA1Q9Y6Y1 1673 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 VGLL3A8MV65 326 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 SH2B2O14492 632 aaPredicted RBP12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 LONRF3Q496Y0 759 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 SYT10Q6XYQ8 523 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 CATIPQ7Z7H3 387 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 TNKSO95271 1327 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 OVOS2A0A0G2JMS6 1433 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 CSF1RP07333 972 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 TOP1P11387 765 aaKnown RBP12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 XBP1P17861 261 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 EIF6P56537 245 aaKnown RBP12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 PPARAQ07869 468 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 SNW1Q13573 536 aaKnown RBP12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 USP49Q70CQ1 688 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 ESR2Q92731 530 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 SERTAD1Q9UHV2 236 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 RGPD5Q99666 1765 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 FOXP2O15409 715 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 URI1O94763 535 aaPredicted RBP12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 IL6STP40189 918 aaPredicted RBP12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 ZNF654Q8IZM8 581 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 RASGRP4Q8TDF6 673 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 NLRP3Q96P20 1036 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 KRT23Q9C075 422 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 FANCLQ9NW38 375 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 RTEL1Q9NZ71 1219 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 PCDHB6Q9Y5E3 794 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 PCDHA5Q9Y5H7 936 aa12.58□□□□□ -0.4
DNMT3A-203ENST00000380746 MYRIPQ8NFW9 859 aa12.57□□□□□ -0.4
DNMT3A-203ENST00000380746 CTCFLQ8NI51 663 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-203ENST00000380746 BLZF1Q9H2G9 400 aa12.57□□□□□ -0.4
DNMT3A-203ENST00000380746 ZHX1Q9UKY1 873 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-203ENST00000380746 GSG1L2A8MUP6 293 aa12.57□□□□□ -0.4
DNMT3A-203ENST00000380746 PRDX5P30044 214 aa12.57□□□□□ -0.4
DNMT3A-203ENST00000380746 BRAPQ7Z569 592 aa12.57□□□□□ -0.4
DNMT3A-203ENST00000380746 MARCH10Q8NA82 808 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-203ENST00000380746 PCMTD1Q96MG8 357 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-203ENST00000380746 DNAI1Q9UI46 699 aa12.57□□□□□ -0.4
DNMT3A-203ENST00000380746 MED1Q15648 1581 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-203ENST00000380746 PLEKHA8P1O95397 391 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 GOLGA8HP0CJ92 632 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 FANCCQ00597 558 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 UBE3CQ15386 1083 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 LRRC8AQ8IWT6 810 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 TDRD7Q8NHU6 1098 aaKnown RBP12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 NOL10Q9BSC4 688 aaKnown RBP12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 ZMYM6O95789 1325 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 SOS2Q07890 1332 aaPredicted RBP12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 MROH5Q6ZUA9 1318 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 PIK3AP1Q6ZUJ8 805 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 FMR1NBQ8N0W7 255 aaPredicted RBP12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 RIMBP2O15034 1052 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 MARCH6O60337 910 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 ADKP55263 362 aaKnown RBP12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 KARSQ15046 597 aaKnown RBP12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 DIXDC1Q155Q3 683 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 ADGRA1Q86SQ6 560 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 FANCBQ8NB91 859 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 GPKOWQ92917 476 aaPredicted RBP eCLIP12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 SMARCE1Q969G3 411 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 LY9Q9HBG7 655 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms