RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 PRDM1O75626 825 aa14.01□□□□□ -0.17
USP3-202ENST00000380324 LIFRP42702 1097 aa14.01□□□□□ -0.17
USP3-202ENST00000380324 WTAPQ15007 396 aa14.01□□□□□ -0.17
USP3-202ENST00000380324 SLC4A8Q2Y0W8 1093 aa14.01□□□□□ -0.17
USP3-202ENST00000380324 CRY2Q49AN0 593 aa14.01□□□□□ -0.17
USP3-202ENST00000380324 FBXO18Q8NFZ0 1043 aa14.01□□□□□ -0.17
USP3-202ENST00000380324 UBAC1Q9BSL1 405 aa14.01□□□□□ -0.17
USP3-202ENST00000380324 DACT1Q9NYF0 836 aa14.01□□□□□ -0.17
USP3-202ENST00000380324 CDKL5O76039 1030 aa14.01□□□□□ -0.17
USP3-202ENST00000380324 UFL1O94874 794 aa14.01□□□□□ -0.17
USP3-202ENST00000380324 POLR3DP05423 398 aaPredicted RBP14.01□□□□□ -0.17
USP3-202ENST00000380324 GPSM2P81274 684 aa14.01□□□□□ -0.17
USP3-202ENST00000380324 EVX2Q03828 476 aa14.01□□□□□ -0.17
USP3-202ENST00000380324 CPLX2Q6PUV4 134 aaKnown RBP14.01□□□□□ -0.17
USP3-202ENST00000380324 NUP62CLQ9H1M0 184 aa14.01□□□□□ -0.17
USP3-202ENST00000380324 UBE2Q2LH0YL09 131 aa14□□□□□ -0.17
USP3-202ENST00000380324 POLRMTO00411 1230 aaKnown RBP14□□□□□ -0.17
USP3-202ENST00000380324 RANBP6O60518 1105 aaKnown RBP14□□□□□ -0.17
USP3-202ENST00000380324 LETM1O95202 739 aaPredicted RBP14□□□□□ -0.17
USP3-202ENST00000380324 ZNF827Q17R98 1081 aa14□□□□□ -0.17
USP3-202ENST00000380324 ALG1Q9BT22 464 aa14□□□□□ -0.17
USP3-202ENST00000380324 BRIP1Q9BX63 1249 aa14□□□□□ -0.17
USP3-202ENST00000380324 LEMD3Q9Y2U8 911 aa14□□□□□ -0.17
USP3-202ENST00000380324 KIAA1551Q9HCM1 1747 aa14□□□□□ -0.17
USP3-202ENST00000380324 NR1I2O75469 434 aa13.99□□□□□ -0.17
USP3-202ENST00000380324 SYNE3Q6ZMZ3 975 aa13.99□□□□□ -0.17
USP3-202ENST00000380324 ZNF804AQ7Z570 1209 aa13.99□□□□□ -0.17
USP3-202ENST00000380324 ESR2Q92731 530 aa13.99□□□□□ -0.17
USP3-202ENST00000380324 ZNF396Q96N95 335 aaPredicted RBP13.99□□□□□ -0.17
USP3-202ENST00000380324 MYH6P13533 1939 aa13.99□□□□□ -0.17
USP3-202ENST00000380324 ANKRD31Q8N7Z5 1873 aa13.99□□□□□ -0.17
USP3-202ENST00000380324 KIF28PB7ZC32 967 aa13.99□□□□□ -0.17
USP3-202ENST00000380324 USP17L12C9JPN9 530 aa13.99□□□□□ -0.17
USP3-202ENST00000380324 USP17L21D6R901 530 aa13.99□□□□□ -0.17
USP3-202ENST00000380324 CTR9Q6PD62 1173 aa13.99□□□□□ -0.17
USP3-202ENST00000380324 NUP133Q8WUM0 1156 aa13.99□□□□□ -0.17
USP3-202ENST00000380324 RBM17Q96I25 401 aaKnown RBP13.99□□□□□ -0.17
USP3-202ENST00000380324 CRNKL1Q9BZJ0 848 aaKnown RBP13.99□□□□□ -0.17
USP3-202ENST00000380324 FAM217BQ9NTX9 383 aaPredicted RBP13.99□□□□□ -0.17
USP3-202ENST00000380324 ANAPC4Q9UJX5 808 aa13.99□□□□□ -0.17
USP3-202ENST00000380324 TNKSO95271 1327 aa13.99□□□□□ -0.17
USP3-202ENST00000380324 LDHBP07195 334 aaKnown RBP13.98□□□□□ -0.17
USP3-202ENST00000380324 IARSP41252 1262 aaKnown RBP13.98□□□□□ -0.17
USP3-202ENST00000380324 DIXDC1Q155Q3 683 aa13.98□□□□□ -0.17
USP3-202ENST00000380324 NTRK3Q16288 839 aa13.98□□□□□ -0.17
USP3-202ENST00000380324 CMTR1Q8N1G2 835 aaKnown RBP13.98□□□□□ -0.17
USP3-202ENST00000380324 CCDC82Q8N4S0 544 aa13.98□□□□□ -0.17
USP3-202ENST00000380324 SLC26A6Q9BXS9 759 aa13.98□□□□□ -0.17
USP3-202ENST00000380324 TNMDQ9H2S6 317 aa13.98□□□□□ -0.17
USP3-202ENST00000380324 DCP1AQ9NPI6 582 aaPredicted RBP13.98□□□□□ -0.17
USP3-202ENST00000380324 ME1P48163 572 aa13.98□□□□□ -0.17
USP3-202ENST00000380324 RBM6P78332 1123 aaKnown RBP13.98□□□□□ -0.17
USP3-202ENST00000380324 GRIK5Q16478 980 aa13.98□□□□□ -0.17
USP3-202ENST00000380324 RTN1Q16799 776 aa13.98□□□□□ -0.17
USP3-202ENST00000380324 CKAP2LQ8IYA6 745 aa13.98□□□□□ -0.17
USP3-202ENST00000380324 PPP1R9BQ96SB3 815 aa13.98□□□□□ -0.17
USP3-202ENST00000380324 APBA3O96018 575 aa13.97□□□□□ -0.17
USP3-202ENST00000380324 KIF23Q02241 960 aaPredicted RBP13.97□□□□□ -0.17
USP3-202ENST00000380324 MAP3K11Q16584 847 aa13.97□□□□□ -0.17
USP3-202ENST00000380324 SPTY2D1Q68D10 685 aaPredicted RBP13.97□□□□□ -0.17
USP3-202ENST00000380324 ZNF654Q8IZM8 581 aa13.97□□□□□ -0.17
USP3-202ENST00000380324 TDRD7Q8NHU6 1098 aaKnown RBP13.97□□□□□ -0.17
USP3-202ENST00000380324 WDR66Q8TBY9 1149 aa13.97□□□□□ -0.17
USP3-202ENST00000380324 GGA1Q9UJY5 639 aa13.97□□□□□ -0.17
USP3-202ENST00000380324 CYP2D6P10635 497 aa13.97□□□□□ -0.17
USP3-202ENST00000380324 FAM43AQ8N2R8 423 aa13.97□□□□□ -0.17
USP3-202ENST00000380324 DDX19AQ9NUU7 478 aaKnown RBP13.97□□□□□ -0.17
USP3-202ENST00000380324 RCOR1Q9UKL0 485 aa13.97□□□□□ -0.17
USP3-202ENST00000380324 NAV1Q8NEY1 1877 aa13.97□□□□□ -0.17
USP3-202ENST00000380324 GNL2Q13823 731 aaKnown RBP13.96□□□□□ -0.17
USP3-202ENST00000380324 MYSM1Q5VVJ2 828 aa13.96□□□□□ -0.17
USP3-202ENST00000380324 KRT40Q6A162 431 aa13.96□□□□□ -0.17
USP3-202ENST00000380324 ENAHQ8N8S7 591 aaPredicted RBP13.96□□□□□ -0.17
USP3-202ENST00000380324 FUCA2Q9BTY2 467 aa13.96□□□□□ -0.17
USP3-202ENST00000380324 RRAGDQ9NQL2 400 aaPredicted RBP13.96□□□□□ -0.17
USP3-202ENST00000380324 CLIC4Q9Y696 253 aa13.96□□□□□ -0.17
USP3-202ENST00000380324 SSRP1Q08945 709 aaKnown RBP13.96□□□□□ -0.18
USP3-202ENST00000380324 ZNF772Q68DY9 489 aaPredicted RBP13.96□□□□□ -0.18
USP3-202ENST00000380324 ATL3Q6DD88 541 aa13.96□□□□□ -0.18
USP3-202ENST00000380324 BRAPQ7Z569 592 aa13.96□□□□□ -0.18
USP3-202ENST00000380324 ZSCAN10Q96SZ4 725 aaPredicted RBP13.96□□□□□ -0.18
USP3-202ENST00000380324 DLEC1Q9Y238 1755 aa13.96□□□□□ -0.18
USP3-202ENST00000380324 LRRC37AA6NMS7 1700 aa13.96□□□□□ -0.18
USP3-202ENST00000380324 NID2Q14112 1375 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.95□□□□□ -0.18
USP3-202ENST00000380324 CCDC192P0DO97 292 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 GUCY1A2P33402 732 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 TRIM29Q14134 588 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 SEC23AQ15436 765 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 CCAR1Q8IX12 1150 aaKnown RBP13.95□□□□□ -0.18
USP3-202ENST00000380324 GOLPH3LQ9H4A5 285 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 CLSTN2Q9H4D0 955 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 MCM9Q9NXL9 1143 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 ARPP21Q9UBL0 812 aaPredicted RBP13.95□□□□□ -0.18
USP3-202ENST00000380324 CDK5RAP2Q96SN8 1893 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 C6orf229H3BNL8 230 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 FMNL1O95466 1100 aaPredicted RBP13.95□□□□□ -0.18
USP3-202ENST00000380324 ATP2B4P23634 1241 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 STK38Q15208 465 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 IFIT1BQ5T764 474 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms