RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 SCN9AQ15858 1988 aa9.16□□□□□ -0.94
CDKL5-202ENST00000379996 SYCE3A1L190 88 aa9.16□□□□□ -0.94
CDKL5-202ENST00000379996 OFD1O75665 1012 aa9.16□□□□□ -0.94
CDKL5-202ENST00000379996 RASGRF1Q13972 1273 aa9.16□□□□□ -0.94
CDKL5-202ENST00000379996 TSGA10IPQ3SY00 556 aa9.16□□□□□ -0.94
CDKL5-202ENST00000379996 VPS53Q5VIR6 699 aa9.16□□□□□ -0.94
CDKL5-202ENST00000379996 PODNQ7Z5L7 613 aa9.16□□□□□ -0.94
CDKL5-202ENST00000379996 MAP4K1Q92918 833 aa9.16□□□□□ -0.94
CDKL5-202ENST00000379996 USP48Q86UV5 1035 aa9.15□□□□□ -0.94
CDKL5-202ENST00000379996 MRIQ9BWK5 157 aa9.15□□□□□ -0.94
CDKL5-202ENST00000379996 CD209Q9NNX6 404 aa9.15□□□□□ -0.94
CDKL5-202ENST00000379996 WDR33Q9C0J8 1336 aaKnown RBP9.15□□□□□ -0.94
CDKL5-202ENST00000379996 KLRK1P26718 216 aa9.15□□□□□ -0.94
CDKL5-202ENST00000379996 BCAMP50895 628 aa9.15□□□□□ -0.94
CDKL5-202ENST00000379996 TERF1P54274 439 aa9.15□□□□□ -0.94
CDKL5-202ENST00000379996 KCTD17Q8N5Z5 321 aa9.15□□□□□ -0.94
CDKL5-202ENST00000379996 TBC1D22AQ8WUA7 517 aa9.15□□□□□ -0.94
CDKL5-202ENST00000379996 CCDC171Q6TFL3 1326 aa9.15□□□□□ -0.94
CDKL5-202ENST00000379996 ZSCAN22P10073 491 aaPredicted RBP9.15□□□□□ -0.95
CDKL5-202ENST00000379996 PTGDRQ13258 359 aa9.15□□□□□ -0.95
CDKL5-202ENST00000379996 SCARF1Q14162 830 aa9.15□□□□□ -0.95
CDKL5-202ENST00000379996 ZSCAN25Q6NSZ9 544 aa9.15□□□□□ -0.95
CDKL5-202ENST00000379996 WDR66Q8TBY9 1149 aa9.15□□□□□ -0.95
CDKL5-202ENST00000379996 FHDC1Q9C0D6 1143 aaPredicted RBP9.15□□□□□ -0.95
CDKL5-202ENST00000379996 LIMCH1Q9UPQ0 1083 aa9.15□□□□□ -0.95
CDKL5-202ENST00000379996 BOLA1Q9Y3E2 137 aa9.15□□□□□ -0.95
CDKL5-202ENST00000379996 CDK5RAP2Q96SN8 1893 aa9.15□□□□□ -0.95
CDKL5-202ENST00000379996 EVI5O60447 810 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 SYT1P21579 422 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 UBE3CQ15386 1083 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 WASHC4Q2M389 1173 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 GORABQ5T7V8 394 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 TXNRD3Q86VQ6 643 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 NLGN2Q8NFZ4 835 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 SYT17Q9BSW7 474 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 MTMR6Q9Y217 621 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 LAMB1P07942 1786 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 GYG1P46976 350 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 PCMTD1Q96MG8 357 aaPredicted RBP9.14□□□□□ -0.95
CDKL5-202ENST00000379996 HELLSQ9NRZ9 838 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 TAF6LQ9Y6J9 622 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 TCRBV5S4A2TA0A5A2 114 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 C21orf2O43822 256 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 F13A1P00488 732 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 CERS3Q8IU89 383 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 BOLA2Q9H3K6 86 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 GDPD2Q9HCC8 539 aa9.14□□□□□ -0.95
CDKL5-202ENST00000379996 ZMYM6O95789 1325 aa9.13□□□□□ -0.95
CDKL5-202ENST00000379996 ZC3H4Q9UPT8 1303 aaKnown RBP9.13□□□□□ -0.95
CDKL5-202ENST00000379996 CPA1P15085 419 aa9.13□□□□□ -0.95
CDKL5-202ENST00000379996 ZAP70P43403 619 aa9.13□□□□□ -0.95
CDKL5-202ENST00000379996 FOXD4L5Q5VV16 416 aaPredicted RBP9.13□□□□□ -0.95
CDKL5-202ENST00000379996 SPTY2D1Q68D10 685 aaPredicted RBP9.13□□□□□ -0.95
CDKL5-202ENST00000379996 SLC51AQ86UW1 340 aa9.13□□□□□ -0.95
CDKL5-202ENST00000379996 FOXD4L4Q8WXT5 416 aaPredicted RBP9.13□□□□□ -0.95
CDKL5-202ENST00000379996 ZC3H12CQ9C0D7 883 aaKnown RBP9.13□□□□□ -0.95
CDKL5-202ENST00000379996 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDKL5-202ENST00000379996 MYO3BQ8WXR4 1341 aa9.13□□□□□ -0.95
CDKL5-202ENST00000379996 WTIPA6NIX2 430 aaPredicted RBP9.13□□□□□ -0.95
CDKL5-202ENST00000379996 NFKBIEO00221 500 aa9.13□□□□□ -0.95
CDKL5-202ENST00000379996 STRIP1Q5VSL9 837 aa9.13□□□□□ -0.95
CDKL5-202ENST00000379996 CWC27Q6UX04 472 aaKnown RBP9.13□□□□□ -0.95
CDKL5-202ENST00000379996 FAM163AQ96GL9 167 aaPredicted RBP9.13□□□□□ -0.95
CDKL5-202ENST00000379996 ZKSCAN5Q9Y2L8 839 aa9.13□□□□□ -0.95
CDKL5-202ENST00000379996 A0A0D9SFI3 127 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 SNAP23O00161 211 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 ADD2P35612 726 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 IARSP41252 1262 aaKnown RBP9.12□□□□□ -0.95
CDKL5-202ENST00000379996 ME3Q16798 604 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 ZMYM1Q5SVZ6 1142 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 TAOK3Q9H2K8 898 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 CNPY2Q9Y2B0 182 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 ARIH1Q9Y4X5 557 aaPredicted RBP9.12□□□□□ -0.95
CDKL5-202ENST00000379996 RNF113AO15541 343 aaKnown RBP9.12□□□□□ -0.95
CDKL5-202ENST00000379996 STX6O43752 255 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 MCM5P33992 734 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 HDLBPQ00341 1268 aaKnown RBP9.12□□□□□ -0.95
CDKL5-202ENST00000379996 TOB2Q14106 344 aaPredicted RBP9.12□□□□□ -0.95
CDKL5-202ENST00000379996 RUFY2Q8WXA3 655 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 FAM227BQ96M60 508 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 TPCN1Q9ULQ1 816 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 AMHR2Q16671 573 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 VPS37DQ86XT2 251 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 PIH1D3Q9NQM4 214 aaKnown RBP9.12□□□□□ -0.95
CDKL5-202ENST00000379996 COLQQ9Y215 455 aaPredicted RBP9.12□□□□□ -0.95
CDKL5-202ENST00000379996 MYH2Q9UKX2 1941 aa9.12□□□□□ -0.95
CDKL5-202ENST00000379996 C6orf229H3BNL8 230 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 SLC27A2O14975 620 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 COL2A1P02458 1487 aaPredicted RBP9.11□□□□□ -0.95
CDKL5-202ENST00000379996 CASTP20810 708 aaKnown RBP9.11□□□□□ -0.95
CDKL5-202ENST00000379996 NMIQ13287 307 aaPredicted RBP9.11□□□□□ -0.95
CDKL5-202ENST00000379996 CREB3L3Q68CJ9 461 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 OLFM4Q6UX06 510 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 GAKO14976 1311 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 MAST3O60307 1309 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 GOLIM4O00461 696 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 AP5Z1O43299 807 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 SSTR3P32745 418 aaPredicted RBP9.11□□□□□ -0.95
CDKL5-202ENST00000379996 MAP3K12Q12852 859 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 APPBP2Q92624 585 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms