RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 PI16Q6UXB8 463 aa12.96□□□□□ -0.33
SMAD9-202ENST00000379826 CTAGE6Q86UF2 777 aa12.96□□□□□ -0.33
SMAD9-202ENST00000379826 CTAGE4Q8IX94 777 aa12.96□□□□□ -0.33
SMAD9-202ENST00000379826 LINC00301Q8NCQ3 95 aa12.96□□□□□ -0.33
SMAD9-202ENST00000379826 GNL3LQ9NVN8 582 aaKnown RBP12.96□□□□□ -0.33
SMAD9-202ENST00000379826 GUCA1BQ9UMX6 200 aa12.96□□□□□ -0.33
SMAD9-202ENST00000379826 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.96□□□□□ -0.33
SMAD9-202ENST00000379826 KANK3Q6NY19 840 aa12.96□□□□□ -0.34
SMAD9-202ENST00000379826 RSPH14Q9UHP6 348 aa12.96□□□□□ -0.34
SMAD9-202ENST00000379826 RIMS1Q86UR5 1692 aaKnown RBP12.96□□□□□ -0.34
SMAD9-202ENST00000379826 H0YHG0 523 aa12.96□□□□□ -0.34
SMAD9-202ENST00000379826 MBD4O95243 580 aa12.96□□□□□ -0.34
SMAD9-202ENST00000379826 CLCN6P51797 869 aa12.96□□□□□ -0.34
SMAD9-202ENST00000379826 STOX1Q6ZVD7 989 aa12.96□□□□□ -0.34
SMAD9-202ENST00000379826 KRT27Q7Z3Y8 459 aa12.96□□□□□ -0.34
SMAD9-202ENST00000379826 C10orf67Q8IYJ2 551 aa12.96□□□□□ -0.34
SMAD9-202ENST00000379826 IGSF22Q8N9C0 903 aa12.96□□□□□ -0.34
SMAD9-202ENST00000379826 CRACR2AQ9BSW2 395 aa12.96□□□□□ -0.34
SMAD9-202ENST00000379826 CENPHQ9H3R5 247 aa12.96□□□□□ -0.34
SMAD9-202ENST00000379826 CAPN2P17655 700 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 SYCP1Q15431 976 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 ZMYM1Q5SVZ6 1142 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 CATIPQ7Z7H3 387 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 ZCRB1Q8TBF4 217 aaKnown RBP12.95□□□□□ -0.34
SMAD9-202ENST00000379826 APPBP2Q92624 585 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 CDK5RAP3Q96JB5 506 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 GBP3Q9H0R5 595 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 POSTNQ15063 836 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 ZNF174Q15697 407 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 STAMQ92783 540 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 USP42Q9H9J4 1324 aaKnown RBP12.95□□□□□ -0.34
SMAD9-202ENST00000379826 PHKG2P15735 406 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 PLIN2Q99541 437 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 KRT23Q9C075 422 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 DDX41Q9UJV9 622 aaKnown RBP12.95□□□□□ -0.34
SMAD9-202ENST00000379826 POTEB2H3BUK9 544 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 GRAMD1CQ8IYS0 662 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 ZNF408Q9H9D4 720 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 MAPK8IP1Q9UQF2 711 aa12.95□□□□□ -0.34
SMAD9-202ENST00000379826 ITGA6P23229 1130 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 EPS15P42566 896 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 OSBP2Q969R2 916 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 DRC1Q96MC2 740 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 CHMP4BP1P59074 171 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 SARM1Q6SZW1 724 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 ARHGAP27Q6ZUM4 889 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 CEP112Q8N8E3 955 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 JADE2Q9NQC1 790 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 PXDNLA1KZ92 1463 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 CUTAO60888 179 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 CMA1P23946 247 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 CTR9Q6PD62 1173 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 DIS3L2Q8IYB7 885 aaKnown RBP12.94□□□□□ -0.34
SMAD9-202ENST00000379826 EPC1Q9H2F5 836 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 ZSCAN29Q8IWY8 852 aaPredicted RBP12.94□□□□□ -0.34
SMAD9-202ENST00000379826 VPS16Q9H269 839 aa12.94□□□□□ -0.34
SMAD9-202ENST00000379826 RBM6P78332 1123 aaKnown RBP12.94□□□□□ -0.34
SMAD9-202ENST00000379826 SH3TC1Q8TE82 1336 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 ZNF532Q9HCE3 1301 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 PATL2C9JE40 543 aaKnown RBP12.93□□□□□ -0.34
SMAD9-202ENST00000379826 ARHGAP6O43182 974 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 MCM7P33993 719 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 ETF1P62495 437 aaKnown RBP12.93□□□□□ -0.34
SMAD9-202ENST00000379826 UBXN1Q04323 297 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 IKQ13123 557 aaPredicted RBP12.93□□□□□ -0.34
SMAD9-202ENST00000379826 PUS7LQ9H0K6 701 aaKnown RBP12.93□□□□□ -0.34
SMAD9-202ENST00000379826 VWA3AA6NCI4 1184 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 ENOX2Q16206 610 aaKnown RBP12.93□□□□□ -0.34
SMAD9-202ENST00000379826 DHX37Q8IY37 1157 aaKnown RBP12.93□□□□□ -0.34
SMAD9-202ENST00000379826 PRDM4Q9UKN5 801 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 BCS1LQ9Y276 419 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 TMEM232C9JQI7 657 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 EAPPQ56P03 285 aaPredicted RBP12.93□□□□□ -0.34
SMAD9-202ENST00000379826 DPY19L2Q6NUT2 758 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 FBXO18Q8NFZ0 1043 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 CTAGE1Q96RT6 745 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 CDCA7Q9BWT1 371 aaPredicted RBP12.93□□□□□ -0.34
SMAD9-202ENST00000379826 BLZF1Q9H2G9 400 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 RNF41Q9H4P4 317 aaPredicted RBP12.93□□□□□ -0.34
SMAD9-202ENST00000379826 CYP7A1P22680 504 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 GPIHBP1Q8IV16 184 aa12.93□□□□□ -0.34
SMAD9-202ENST00000379826 CTCFLQ8NI51 663 aaPredicted RBP12.93□□□□□ -0.34
SMAD9-202ENST00000379826 A0A1W2PQ27 194 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 A0A1W2PQ64 194 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 A0A1W2PQD8 194 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 CTIFO43310 598 aaKnown RBP12.92□□□□□ -0.34
SMAD9-202ENST00000379826 CCZ1BP86790 482 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 CCZ1P86791 482 aaPredicted RBP12.92□□□□□ -0.34
SMAD9-202ENST00000379826 SMC1AQ14683 1233 aaKnown RBP12.92□□□□□ -0.34
SMAD9-202ENST00000379826 IQCB1Q15051 598 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 IFIT1BQ5T764 474 aaKnown RBP12.92□□□□□ -0.34
SMAD9-202ENST00000379826 SYNRGQ9UMZ2 1314 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 ZNF609O15014 1411 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 PSDA5PKW4 1024 aaPredicted RBP12.92□□□□□ -0.34
SMAD9-202ENST00000379826 KRT2P35908 639 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 COL9A3Q14050 684 aaPredicted RBP12.92□□□□□ -0.34
SMAD9-202ENST00000379826 ARMCX5Q6P1M9 558 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 TRIM75PA6NK02 468 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 KIF23Q02241 960 aaPredicted RBP12.92□□□□□ -0.34
SMAD9-202ENST00000379826 SPA17Q15506 151 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms