RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 CRACR2BQ8N4Y2 399 aaPredicted RBP7.99□□□□□ -1.13
NFX1-202ENST00000379521 TCEANC2Q96MN5 208 aa7.99□□□□□ -1.13
NFX1-202ENST00000379521 NOL10Q9BSC4 688 aaKnown RBP7.99□□□□□ -1.13
NFX1-202ENST00000379521 FBXO2Q9UK22 296 aaPredicted RBP7.99□□□□□ -1.13
NFX1-202ENST00000379521 MAP3K11Q16584 847 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 SLC9C2Q5TAH2 1124 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 SHC4Q6S5L8 630 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 NYAP1Q6ZVC0 841 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 KCNG4Q8TDN1 519 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 MED15Q96RN5 788 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 SIP14410 1827 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 FAM205AQ6ZU69 1335 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 ZNF18P17022 549 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 METTL16Q86W50 562 aaKnown RBP7.98□□□□□ -1.13
NFX1-202ENST00000379521 KRT23Q9C075 422 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 RLFQ13129 1914 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 MYO3BQ8WXR4 1341 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 ZNF213O14771 459 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 PRPF3O43395 683 aaKnown RBP7.98□□□□□ -1.13
NFX1-202ENST00000379521 BMP6P22004 513 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 ATP6V1AP38606 617 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 ZNF75DP51815 510 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 SLC35G1Q2M3R5 365 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 RNF26Q9BY78 433 aaPredicted RBP7.98□□□□□ -1.13
NFX1-202ENST00000379521 DACT1Q9NYF0 836 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 CLIC4Q9Y696 253 aa7.98□□□□□ -1.13
NFX1-202ENST00000379521 CCDC192P0DO97 292 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 MCCD1P59942 119 aaPredicted RBP7.97□□□□□ -1.13
NFX1-202ENST00000379521 COBLL1Q53SF7 1204 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 CTR9Q6PD62 1173 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 TMTC2Q8N394 836 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 SPATA32Q96LK8 384 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 A0A0G2JMZ2 1700 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 DHX16O60231 1041 aaKnown RBP7.97□□□□□ -1.13
NFX1-202ENST00000379521 DDAH1O94760 285 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 PBX1P40424 430 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 FAM173BQ6P4H8 233 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 CNNM4Q6P4Q7 775 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 FOXP4Q8IVH2 680 aaPredicted RBP7.97□□□□□ -1.13
NFX1-202ENST00000379521 NYXQ9GZU5 481 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 NUP62CLQ9H1M0 184 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 NCOA5Q9HCD5 579 aaKnown RBP7.97□□□□□ -1.13
NFX1-202ENST00000379521 CNTNAP5Q8WYK1 1306 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 ADCY5O95622 1261 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 PTPREP23469 700 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 E2F4Q16254 413 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 TMEM139Q8IV31 216 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 SH3GLB2Q9NR46 395 aa7.97□□□□□ -1.13
NFX1-202ENST00000379521 WDR81Q562E7 1941 aa7.96□□□□□ -1.13
NFX1-202ENST00000379521 TPM2P07951 284 aa7.96□□□□□ -1.13
NFX1-202ENST00000379521 BCAMP50895 628 aa7.96□□□□□ -1.13
NFX1-202ENST00000379521 C11orf57Q6ZUT1 292 aaPredicted RBP7.96□□□□□ -1.13
NFX1-202ENST00000379521 ZNF396Q96N95 335 aaPredicted RBP7.96□□□□□ -1.13
NFX1-202ENST00000379521 MRIQ9BWK5 157 aa7.96□□□□□ -1.13
NFX1-202ENST00000379521 ZNF652Q9Y2D9 606 aa7.96□□□□□ -1.13
NFX1-202ENST00000379521 WTIPA6NIX2 430 aaPredicted RBP7.96□□□□□ -1.14
NFX1-202ENST00000379521 EDIL3O43854 480 aa7.96□□□□□ -1.14
NFX1-202ENST00000379521 ADAMTS2O95450 1211 aa7.96□□□□□ -1.14
NFX1-202ENST00000379521 FKBP1AP62942 108 aaKnown RBP7.96□□□□□ -1.14
NFX1-202ENST00000379521 ANO1Q5XXA6 986 aa7.96□□□□□ -1.14
NFX1-202ENST00000379521 NEUROD6Q96NK8 337 aa7.96□□□□□ -1.14
NFX1-202ENST00000379521 KIAA1468Q9P260 1216 aa7.96□□□□□ -1.14
NFX1-202ENST00000379521 ACTN4O43707 911 aaKnown RBP7.96□□□□□ -1.14
NFX1-202ENST00000379521 CCZ1BP86790 482 aa7.96□□□□□ -1.14
NFX1-202ENST00000379521 CCZ1P86791 482 aaPredicted RBP7.96□□□□□ -1.14
NFX1-202ENST00000379521 PPARAQ07869 468 aa7.96□□□□□ -1.14
NFX1-202ENST00000379521 SLC27A3Q5K4L6 730 aa7.96□□□□□ -1.14
NFX1-202ENST00000379521 FOXR2Q6PJQ5 311 aa7.96□□□□□ -1.14
NFX1-202ENST00000379521 AKT1S1Q96B36 256 aa7.96□□□□□ -1.14
NFX1-202ENST00000379521 FTOQ9C0B1 505 aaKnown RBP eCLIP7.96□□□□□ -1.14
NFX1-202ENST00000379521 LRRC4BQ9NT99 713 aa7.96□□□□□ -1.14
NFX1-202ENST00000379521 ATP8A2Q9NTI2 1148 aa7.96□□□□□ -1.14
NFX1-202ENST00000379521 IMPACTQ9P2X3 320 aa7.96□□□□□ -1.14
NFX1-202ENST00000379521 LRRC37A2A6NM11 1700 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 SNHG28P0DPA3 235 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 NDUFA8P51970 172 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 ENAHQ8N8S7 591 aaPredicted RBP7.95□□□□□ -1.14
NFX1-202ENST00000379521 CELF1Q92879 486 aaKnown RBP7.95□□□□□ -1.14
NFX1-202ENST00000379521 ANKRD2Q9GZV1 360 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 KIF3AQ9Y496 699 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 WDR90Q96KV7 1748 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 KLF18A0A0U1RQI7 1052 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 NPM3O75607 178 aaKnown RBP7.95□□□□□ -1.14
NFX1-202ENST00000379521 GABPAQ06546 454 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 MAP3K12Q12852 859 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 CERS3Q8IU89 383 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 LEMD3Q9Y2U8 911 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 SRPRBQ9Y5M8 271 aaKnown RBP7.95□□□□□ -1.14
NFX1-202ENST00000379521 CUTAO60888 179 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 MORC3Q14149 939 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 KRT40Q6A162 431 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 ANKRD7Q92527 254 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 MRPS27Q92552 414 aaKnown RBP7.95□□□□□ -1.14
NFX1-202ENST00000379521 MTMR8Q96EF0 704 aa7.95□□□□□ -1.14
NFX1-202ENST00000379521 RTFDC1Q9BY42 306 aaPredicted RBP7.95□□□□□ -1.14
NFX1-202ENST00000379521 AATFQ9NY61 560 aaKnown RBP eCLIP7.95□□□□□ -1.14
NFX1-202ENST00000379521 LRRC10BA6NIK2 292 aa7.94□□□□□ -1.14
NFX1-202ENST00000379521 FIBPO43427 364 aa7.94□□□□□ -1.14
NFX1-202ENST00000379521 CDKL5O76039 1030 aa7.94□□□□□ -1.14
NFX1-202ENST00000379521 GUCY1A2P33402 732 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms