RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 GPS2Q13227 327 aa7.71□□□□□ -1.18
CDKAL1-202ENST00000378610 ME3Q16798 604 aa7.71□□□□□ -1.18
CDKAL1-202ENST00000378610 ZNF394Q53GI3 561 aa7.71□□□□□ -1.18
CDKAL1-202ENST00000378610 CDC37L1Q7L3B6 337 aa7.71□□□□□ -1.18
CDKAL1-202ENST00000378610 CCDC150Q8NCX0 1101 aa7.71□□□□□ -1.18
CDKAL1-202ENST00000378610 ENGASEQ8NFI3 743 aa7.71□□□□□ -1.18
CDKAL1-202ENST00000378610 C8orf48Q96LL4 319 aa7.71□□□□□ -1.18
CDKAL1-202ENST00000378610 PCDH10Q9P2E7 1040 aa7.71□□□□□ -1.18
CDKAL1-202ENST00000378610 USP54Q70EL1 1684 aa7.71□□□□□ -1.18
CDKAL1-202ENST00000378610 NECTIN1Q15223 517 aa7.7□□□□□ -1.18
CDKAL1-202ENST00000378610 LRRFIP1Q32MZ4 808 aaKnown RBP7.7□□□□□ -1.18
CDKAL1-202ENST00000378610 SLC39A13Q96H72 371 aa7.7□□□□□ -1.18
CDKAL1-202ENST00000378610 ADGRG1Q9Y653 693 aa7.7□□□□□ -1.18
CDKAL1-202ENST00000378610 H3BQF6 201 aa7.7□□□□□ -1.18
CDKAL1-202ENST00000378610 FGRP09769 529 aa7.7□□□□□ -1.18
CDKAL1-202ENST00000378610 SKIP12755 728 aa7.7□□□□□ -1.18
CDKAL1-202ENST00000378610 STX1AQ16623 288 aa7.7□□□□□ -1.18
CDKAL1-202ENST00000378610 KDM3BQ7LBC6 1761 aa7.7□□□□□ -1.18
CDKAL1-202ENST00000378610 RIMS1Q86UR5 1692 aaKnown RBP7.7□□□□□ -1.18
CDKAL1-202ENST00000378610 HDAC5Q9UQL6 1122 aa7.7□□□□□ -1.18
CDKAL1-202ENST00000378610 LDHAP00338 332 aaKnown RBP7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 RESTQ13127 1097 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 CAMK4Q16566 473 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 ANKMY2Q8IV38 441 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 CKAP2LQ8IYA6 745 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 C10orf67Q8IYJ2 551 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 FAM174AQ8TBP5 190 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 DONSONQ9NYP3 566 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 SWAP70Q9UH65 585 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 RAB21Q9UL25 225 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 MAP3K7O43318 606 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 RACK1P63244 317 aaKnown RBP7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 EN1Q05925 392 aaPredicted RBP7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 CT47A1Q5JQC4 288 aaPredicted RBP7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 TMEM132EQ6IEE7 984 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 ZNF280DQ6N043 979 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 TMC7Q7Z402 723 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 NUTM1Q86Y26 1132 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 DRC7Q8IY82 874 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 CACTIN-AS1Q8N1I8 211 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 PHF12Q96QT6 1004 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 DUSP9Q99956 384 aaKnown RBP7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 USP16Q9Y5T5 823 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 EID1Q9Y6B2 187 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 CCP110O43303 1012 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 KIF1CO43896 1103 aaKnown RBP7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 GNAI2P04899 355 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 CD46P15529 392 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 TSHZ3Q63HK5 1081 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 TMEM139Q8IV31 216 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 SSH3Q8TE77 659 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 TRERF1Q96PN7 1200 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 CCDC85AQ96PX6 553 aaPredicted RBP7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 MED4Q9NPJ6 270 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 TPCN1Q9ULQ1 816 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 MRFAP1Q9Y605 127 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 CPS1P31327 1500 aa7.69□□□□□ -1.18
CDKAL1-202ENST00000378610 CEMIPQ8WUJ3 1361 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 NRXN3Q9Y4C0 1643 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 PNMA6EA0A0J9YXQ4 647 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 SORBS3O60504 671 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 CCDC172P0C7W6 258 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 PDCP20941 246 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 DPYDQ12882 1025 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 MLECQ14165 292 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 SWI5Q1ZZU3 235 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 CCDC83Q8IWF9 413 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 RABGGTAQ92696 567 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 KIFC2Q96AC6 838 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 ZBTB9Q96C00 473 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 KIF12Q96FN5 646 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 UTP14AQ9BVJ6 771 aaKnown RBP7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 ZCCHC17Q9NP64 241 aaKnown RBP7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 VTI1BQ9UEU0 232 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 CEP83Q9Y592 693 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 DNMT3AQ9Y6K1 912 aaPredicted RBP7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 SBNO1A3KN83 1393 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 CCDC151A5D8V7 595 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 SEC31AO94979 1220 aaKnown RBP7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 GNALP38405 381 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 ADCK5Q3MIX3 580 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 TTC31Q49AM3 519 aaPredicted RBP7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 JAKMIP3Q5VZ66 844 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 LARP1Q6PKG0 1096 aaKnown RBP7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 TAS1R3Q7RTX0 852 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 WDR75Q8IWA0 830 aaKnown RBP7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 PRPF38AQ8NAV1 312 aaKnown RBP7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 GTF3C2Q8WUA4 911 aaPredicted RBP7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 PPM1EQ8WY54 764 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 CARD10Q9BWT7 1032 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 HSD3B7Q9H2F3 369 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 CHST12Q9NRB3 414 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 SEPT3Q9UH03 358 aa7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 PARP4Q9UKK3 1724 aaKnown RBP7.68□□□□□ -1.18
CDKAL1-202ENST00000378610 EIF3CLB5ME19 914 aaKnown RBP7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 OCLNQ16625 522 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 NBPF6Q5VWK0 638 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 FERMT3Q86UX7 667 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 GOLGA6L1Q8N7Z2 621 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 CEP120Q8N960 986 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms