RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 MRPS27Q92552 414 aaKnown RBP15.79■□□□□ 0.12
TRIM13-202ENST00000378182 BAG6P46379 1132 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 PPME1Q9Y570 386 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 ZEB2O60315 1214 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 DOK7Q18PE1 504 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 CTAGE15A4D2H0 777 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 GOLGA6CA6NDK9 693 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 GOLGA6BA6NDN3 693 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 GOLGA6DP0CG33 693 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 CTAGE8P0CG41 777 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 PRIM1P49642 420 aaKnown RBP15.79■□□□□ 0.12
TRIM13-202ENST00000378182 CTAGE6Q86UF2 777 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 CTAGE4Q8IX94 777 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 ANKS4BQ8N8V4 417 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 GOLGA6AQ9NYA3 693 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 PRKAG2Q9UGJ0 569 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 TESPA1A2RU30 521 aaPredicted RBP15.79■□□□□ 0.12
TRIM13-202ENST00000378182 XRCC6P12956 609 aaKnown RBP eCLIP15.79■□□□□ 0.128e-7■■□□□ 11.8
TRIM13-202ENST00000378182 DLGAP5Q15398 846 aa15.79■□□□□ 0.12
TRIM13-202ENST00000378182 CALUO43852 315 aaPredicted RBP15.78■□□□□ 0.12
TRIM13-202ENST00000378182 RHOXF2BP0C7M4 288 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 CCDC110Q8TBZ0 833 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 RHOXF2Q9BQY4 288 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 TBC1D2Q9BYX2 928 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 TIAM1Q13009 1591 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 CTDSPL2Q05D32 466 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 APOL6Q9BWW8 343 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 STMN4Q9H169 189 aaPredicted RBP15.78■□□□□ 0.12
TRIM13-202ENST00000378182 SEPT10Q9P0V9 454 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 SPTLC2O15270 562 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 PCF11O94913 1555 aaKnown RBP15.78■□□□□ 0.12
TRIM13-202ENST00000378182 SF3A3Q12874 501 aaKnown RBP eCLIP15.78■□□□□ 0.12
TRIM13-202ENST00000378182 MTHFSDQ2M296 383 aaKnown RBP15.78■□□□□ 0.12
TRIM13-202ENST00000378182 ZNF569Q5MCW4 686 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 RDH13Q8NBN7 331 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 CDCA7Q9BWT1 371 aaPredicted RBP15.78■□□□□ 0.12
TRIM13-202ENST00000378182 MLXIPQ9HAP2 919 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 ZSCAN23Q3MJ62 389 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 PPP4R4Q6NUP7 873 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 MAPKAPK5Q8IW41 473 aa15.78■□□□□ 0.12
TRIM13-202ENST00000378182 EIF4G3O43432 1585 aaKnown RBP15.78■□□□□ 0.12
TRIM13-202ENST00000378182 ABT1Q9ULW3 272 aaKnown RBP15.77■□□□□ 0.12
TRIM13-202ENST00000378182 TACC3Q9Y6A5 838 aa15.77■□□□□ 0.12
TRIM13-202ENST00000378182 NEMFO60524 1076 aa15.77■□□□□ 0.12
TRIM13-202ENST00000378182 C8orf58Q8NAV2 365 aa15.77■□□□□ 0.12
TRIM13-202ENST00000378182 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.77■□□□□ 0.12
TRIM13-202ENST00000378182 V9GYY5 206 aaPredicted RBP15.77■□□□□ 0.12
TRIM13-202ENST00000378182 NR1I2O75469 434 aa15.77■□□□□ 0.12
TRIM13-202ENST00000378182 RPL13P26373 211 aaKnown RBP15.77■□□□□ 0.12
TRIM13-202ENST00000378182 PDE4DQ08499 809 aa15.77■□□□□ 0.12
TRIM13-202ENST00000378182 PALM3A6NDB9 673 aaPredicted RBP15.77■□□□□ 0.11
TRIM13-202ENST00000378182 LRMPQ12912 555 aa15.77■□□□□ 0.11
TRIM13-202ENST00000378182 FRMPD2Q68DX3 1309 aaPredicted RBP15.77■□□□□ 0.11
TRIM13-202ENST00000378182 SLC1A4P43007 532 aa15.77■□□□□ 0.11
TRIM13-202ENST00000378182 MMS19Q96T76 1030 aa15.77■□□□□ 0.11
TRIM13-202ENST00000378182 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.77■□□□□ 0.11
TRIM13-202ENST00000378182 SYNJ2BP-COX16A0A087WUM0 186 aa15.77■□□□□ 0.11
TRIM13-202ENST00000378182 PRDM1O75626 825 aa15.77■□□□□ 0.11
TRIM13-202ENST00000378182 EIF4A2Q14240 407 aaKnown RBP15.77■□□□□ 0.11
TRIM13-202ENST00000378182 CCDC89Q8N998 374 aa15.77■□□□□ 0.11
TRIM13-202ENST00000378182 NOC4LQ9BVI4 516 aaKnown RBP15.77■□□□□ 0.11
TRIM13-202ENST00000378182 COX16Q9P0S2 106 aa15.77■□□□□ 0.11
TRIM13-202ENST00000378182 MYO1AQ9UBC5 1043 aa15.77■□□□□ 0.11
TRIM13-202ENST00000378182 MTUS1Q9ULD2 1270 aa15.77■□□□□ 0.11
TRIM13-202ENST00000378182 FAM102BQ5T8I3 360 aa15.76■□□□□ 0.11
TRIM13-202ENST00000378182 FMNL3Q8IVF7 1028 aa15.76■□□□□ 0.11
TRIM13-202ENST00000378182 MRPL44Q9H9J2 332 aaKnown RBP15.76■□□□□ 0.11
TRIM13-202ENST00000378182 TIMM10P62072 90 aa15.76■□□□□ 0.11
TRIM13-202ENST00000378182 DYMQ7RTS9 669 aa15.76■□□□□ 0.11
TRIM13-202ENST00000378182 hCG_1642624A0A1W2PR95 340 aa15.76■□□□□ 0.11
TRIM13-202ENST00000378182 CD19P15391 556 aa15.76■□□□□ 0.11
TRIM13-202ENST00000378182 HACE1Q8IYU2 909 aa15.76■□□□□ 0.11
TRIM13-202ENST00000378182 GTPBP4Q9BZE4 634 aaKnown RBP15.76■□□□□ 0.11
TRIM13-202ENST00000378182 DYNC1I1O14576 645 aa15.76■□□□□ 0.11
TRIM13-202ENST00000378182 YARSP54577 528 aaKnown RBP15.76■□□□□ 0.11
TRIM13-202ENST00000378182 LIN9Q5TKA1 542 aa15.76■□□□□ 0.11
TRIM13-202ENST00000378182 SCNN1DP51172 638 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 KRT83P78385 493 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 ST7Q9NRC1 585 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 DACT1Q9NYF0 836 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 KRT86O43790 486 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 PPFIA1Q13136 1202 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 DCUN1D2Q6PH85 259 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 TPH2Q8IWU9 490 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 PARD3BQ8TEW8 1205 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 SLC5A4Q9NY91 659 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 IGHDP01880 384 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 KRT24Q2M2I5 525 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 VPS16Q9H269 839 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 ESYT1Q9BSJ8 1104 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 ASIC2Q16515 512 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 SUPT20HQ8NEM7 779 aa15.75■□□□□ 0.11
TRIM13-202ENST00000378182 TNNI1P19237 187 aa15.74■□□□□ 0.11
TRIM13-202ENST00000378182 CREB3L3Q68CJ9 461 aa15.74■□□□□ 0.11
TRIM13-202ENST00000378182 RSPH14Q9UHP6 348 aa15.74■□□□□ 0.11
TRIM13-202ENST00000378182 GTF2IP78347 998 aa15.74■□□□□ 0.11
TRIM13-202ENST00000378182 CHMP6Q96FZ7 201 aa15.74■□□□□ 0.11
TRIM13-202ENST00000378182 ANKFY1Q9P2R3 1169 aa15.74■□□□□ 0.11
TRIM13-202ENST00000378182 EXOC7Q9UPT5 735 aa15.74■□□□□ 0.11
TRIM13-202ENST00000378182 HOOK2Q96ED9 719 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms