RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 CAMSAP1Q5T5Y3 1602 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 RPAP1Q9BWH6 1393 aaPredicted RBP9.9□□□□□ -0.82
PCDH9-202ENST00000377865 ADGRB2O60241 1585 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 MYO3AQ8NEV4 1616 aa9.9□□□□□ -0.83
PCDH9-202ENST00000377865 TAF5LO75529 589 aa9.9□□□□□ -0.83
PCDH9-202ENST00000377865 JAKMIP2Q96AA8 810 aa9.9□□□□□ -0.83
PCDH9-202ENST00000377865 FERMT2Q96AC1 680 aa9.9□□□□□ -0.83
PCDH9-202ENST00000377865 BPIFA3Q9BQP9 254 aa9.9□□□□□ -0.83
PCDH9-202ENST00000377865 GOPCQ9HD26 462 aa9.9□□□□□ -0.83
PCDH9-202ENST00000377865 RFX7Q2KHR2 1363 aa9.9□□□□□ -0.83
PCDH9-202ENST00000377865 NEURL1BA8MQ27 555 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 TNNC1P63316 161 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 PAK1Q13153 545 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 PNOCQ13519 176 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 NECTIN1Q15223 517 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 ZNF790Q6PG37 636 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 LRRC59Q96AG4 307 aaKnown RBP9.89□□□□□ -0.83
PCDH9-202ENST00000377865 GOLGA6CA6NDK9 693 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 POLR2DO15514 142 aaKnown RBP9.89□□□□□ -0.83
PCDH9-202ENST00000377865 GOLGA6DP0CG33 693 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 DZIP1Q86YF9 867 aaKnown RBP9.89□□□□□ -0.83
PCDH9-202ENST00000377865 IL17REQ8NFR9 667 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 EAF2Q96CJ1 260 aaPredicted RBP9.89□□□□□ -0.83
PCDH9-202ENST00000377865 GOLGA6AQ9NYA3 693 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 CCDC172P0C7W6 258 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 IDEP14735 1019 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 NDUFA8P51970 172 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 SPTY2D1Q68D10 685 aaPredicted RBP9.89□□□□□ -0.83
PCDH9-202ENST00000377865 RASAL2Q9UJF2 1139 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 ALKQ9UM73 1620 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 TSPY2A6NKD2 308 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 LARGE1O95461 756 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 PRPHP41219 470 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 ANKS4BQ8N8V4 417 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 MORC2Q9Y6X9 1032 aaPredicted RBP9.89□□□□□ -0.83
PCDH9-202ENST00000377865 SH3TC1Q8TE82 1336 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 CARMIL3Q8ND23 1372 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 PLEKHG1Q9ULL1 1385 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 TMCO5BA8MYB1 307 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 PHACTR2O75167 634 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 PLCD1P51178 756 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 SPATS2Q86XZ4 545 aaKnown RBP9.89□□□□□ -0.83
PCDH9-202ENST00000377865 NSUN7Q8NE18 718 aaKnown RBP9.89□□□□□ -0.83
PCDH9-202ENST00000377865 TSKSQ9UJT2 592 aa9.89□□□□□ -0.83
PCDH9-202ENST00000377865 EZRP15311 586 aaKnown RBP9.88□□□□□ -0.83
PCDH9-202ENST00000377865 TERF2Q15554 542 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 CCDC152Q4G0S7 254 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 CFAP58Q5T655 872 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 MSL1Q68DK7 614 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 CCDC155Q8N6L0 562 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 CABP5Q9NP86 173 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 MYO1AQ9UBC5 1043 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 CYP7A1P22680 504 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 ARHGAP25P42331 645 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 PPFIA1Q13136 1202 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 CCDC50Q8IVM0 306 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 LGR6Q9HBX8 967 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 MAGEB6P1A0A0J9YX57 407 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 ASIC1P78348 528 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 NEK11Q8NG66 645 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 GPR108Q9NPR9 543 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 GPAA1O43292 621 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 PDIA3P30101 505 aaKnown RBP9.88□□□□□ -0.83
PCDH9-202ENST00000377865 CCT6AP40227 531 aaKnown RBP9.88□□□□□ -0.83
PCDH9-202ENST00000377865 CETN2P41208 172 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 SPECC1Q5M775 1068 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 DIS3L2Q8IYB7 885 aaKnown RBP9.88□□□□□ -0.83
PCDH9-202ENST00000377865 ANKRD7Q92527 254 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 DDX12PQ92771 950 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 SLC52A2Q9HAB3 445 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 DLC1Q96QB1 1528 aa9.88□□□□□ -0.83
PCDH9-202ENST00000377865 GOLGA6BA6NDN3 693 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 GOLGA8KD6RF30 607 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 SRGAP1Q7Z6B7 1085 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 NFATC2IPQ8NCF5 419 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 SECISBP2LQ93073 1101 aaKnown RBP9.87□□□□□ -0.83
PCDH9-202ENST00000377865 XAGE2Q96GT9 111 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 A2ML1A8K2U0 1454 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 TMEM2Q9UHN6 1383 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 NOP2P46087 812 aaKnown RBP9.87□□□□□ -0.83
PCDH9-202ENST00000377865 DNA2P51530 1060 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 OTUD7BQ6GQQ9 843 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 SLF2Q8IX21 1173 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 ATRIPQ8WXE1 791 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 CCDC113Q9H0I3 377 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 INPP5BP32019 993 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 IFT20Q8IY31 132 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 COPRSQ9NQ92 184 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 NEXMIFQ5QGS0 1516 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 B4E1Z4 1266 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 NEFHP12036 1026 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 CLCN6P51797 869 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 DTHD1Q6ZMT9 781 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 MAGEB6Q8N7X4 407 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 KLHDC4Q8TBB5 520 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 EXOC4Q96A65 974 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 MYOM1P52179 1685 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 KIF20BQ96Q89 1820 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 GPTP24298 496 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 GSTO1P78417 241 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms