RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 VEZTQ9HBM0 779 aa25.45■■□□□ 1.67
CBWD3-202ENST00000377342 NMRK2Q9NPI5 230 aa25.45■■□□□ 1.67
CBWD3-202ENST00000377342 GGA3Q9NZ52 723 aa25.45■■□□□ 1.67
CBWD3-202ENST00000377342 RBM8AQ9Y5S9 174 aaKnown RBP25.45■■□□□ 1.67
CBWD3-202ENST00000377342 COL2A1P02458 1487 aaPredicted RBP25.45■■□□□ 1.66
CBWD3-202ENST00000377342 NPM3O75607 178 aaKnown RBP25.45■■□□□ 1.66
CBWD3-202ENST00000377342 FGAP02671 866 aa25.45■■□□□ 1.66
CBWD3-202ENST00000377342 FKBP1CQ5VVH2 108 aa25.45■■□□□ 1.66
CBWD3-202ENST00000377342 ZFPM1Q8IX07 1006 aa25.45■■□□□ 1.66
CBWD3-202ENST00000377342 OSBPL5Q9H0X9 879 aaPredicted RBP25.45■■□□□ 1.66
CBWD3-202ENST00000377342 TMOD2Q9NZR1 351 aa25.45■■□□□ 1.66
CBWD3-202ENST00000377342 TCP10L2B9ZVM9 353 aa25.44■■□□□ 1.66
CBWD3-202ENST00000377342 EVX2Q03828 476 aa25.44■■□□□ 1.66
CBWD3-202ENST00000377342 ANGEL2Q5VTE6 544 aaKnown RBP25.44■■□□□ 1.66
CBWD3-202ENST00000377342 RRAGCQ9HB90 399 aa25.44■■□□□ 1.66
CBWD3-202ENST00000377342 SCAF8Q9UPN6 1271 aaKnown RBP25.44■■□□□ 1.66
CBWD3-202ENST00000377342 EPB41L2O43491 1005 aaKnown RBP25.43■■□□□ 1.66
CBWD3-202ENST00000377342 TDO2P48775 406 aa25.43■■□□□ 1.66
CBWD3-202ENST00000377342 NACAP1Q9BZK3 213 aa25.43■■□□□ 1.66
CBWD3-202ENST00000377342 NAPBQ9H115 298 aa25.43■■□□□ 1.66
CBWD3-202ENST00000377342 SMIM22K7EJ46 135 aa25.42■■□□□ 1.66
CBWD3-202ENST00000377342 ENTPD3O75355 529 aa25.42■■□□□ 1.66
CBWD3-202ENST00000377342 TCP10Q12799 353 aa25.42■■□□□ 1.66
CBWD3-202ENST00000377342 SAP30BPQ9UHR5 308 aaKnown RBP25.42■■□□□ 1.66
CBWD3-202ENST00000377342 U3KPZ7 1027 aaPredicted RBP25.42■■□□□ 1.66
CBWD3-202ENST00000377342 ATRNL1Q5VV63 1379 aa25.42■■□□□ 1.66
CBWD3-202ENST00000377342 PITPNM2Q9BZ72 1349 aa25.42■■□□□ 1.66
CBWD3-202ENST00000377342 CYP2D7A0A087X1C5 515 aa25.42■■□□□ 1.66
CBWD3-202ENST00000377342 POTEIP0CG38 1075 aa25.42■■□□□ 1.66
CBWD3-202ENST00000377342 POTEJP0CG39 1038 aa25.42■■□□□ 1.66
CBWD3-202ENST00000377342 VEGFAP15692 232 aaPredicted RBP25.42■■□□□ 1.66
CBWD3-202ENST00000377342 NECTIN1Q15223 517 aa25.42■■□□□ 1.66
CBWD3-202ENST00000377342 CTR9Q6PD62 1173 aa25.42■■□□□ 1.66
CBWD3-202ENST00000377342 SH3BP5LQ7L8J4 393 aa25.42■■□□□ 1.66
CBWD3-202ENST00000377342 MCM9Q9NXL9 1143 aa25.42■■□□□ 1.66
CBWD3-202ENST00000377342 EIF5BO60841 1220 aaKnown RBP25.41■■□□□ 1.66
CBWD3-202ENST00000377342 CYP2D6P10635 497 aa25.41■■□□□ 1.66
CBWD3-202ENST00000377342 SLC4A8Q2Y0W8 1093 aa25.41■■□□□ 1.66
CBWD3-202ENST00000377342 FAM83AQ86UY5 434 aa25.41■■□□□ 1.66
CBWD3-202ENST00000377342 USP17L12C9JPN9 530 aa25.4■■□□□ 1.66
CBWD3-202ENST00000377342 USP17L21D6R901 530 aa25.4■■□□□ 1.66
CBWD3-202ENST00000377342 EAPPQ56P03 285 aaPredicted RBP25.4■■□□□ 1.66
CBWD3-202ENST00000377342 PNMA8AQ86V59 439 aaPredicted RBP25.4■■□□□ 1.66
CBWD3-202ENST00000377342 CDAN1Q8IWY9 1227 aa25.4■■□□□ 1.66
CBWD3-202ENST00000377342 NBPF3Q9H094 633 aa25.4■■□□□ 1.66
CBWD3-202ENST00000377342 ARPP21Q9UBL0 812 aaPredicted RBP25.4■■□□□ 1.66
CBWD3-202ENST00000377342 PALD1Q9ULE6 856 aa25.4■■□□□ 1.66
CBWD3-202ENST00000377342 TAF6LQ9Y6J9 622 aa25.4■■□□□ 1.66
CBWD3-202ENST00000377342 MYH8P13535 1937 aa25.4■■□□□ 1.66
CBWD3-202ENST00000377342 SBK1Q52WX2 424 aa25.39■■□□□ 1.66
CBWD3-202ENST00000377342 APOBEC3FQ8IUX4 373 aaKnown RBP25.39■■□□□ 1.66
CBWD3-202ENST00000377342 PGAP2Q9UHJ9 254 aa25.39■■□□□ 1.66
CBWD3-202ENST00000377342 ROBO3Q96MS0 1386 aa25.39■■□□□ 1.65
CBWD3-202ENST00000377342 DDTLA6NHG4 134 aaPredicted RBP25.39■■□□□ 1.65
CBWD3-202ENST00000377342 CYP21A2P08686 494 aa25.39■■□□□ 1.65
CBWD3-202ENST00000377342 HSPA4P34932 840 aa25.39■■□□□ 1.65
CBWD3-202ENST00000377342 FAM151AQ8WW52 585 aa25.39■■□□□ 1.65
CBWD3-202ENST00000377342 DDRGK1Q96HY6 314 aa25.39■■□□□ 1.65
CBWD3-202ENST00000377342 TMEM39BQ9GZU3 492 aa25.39■■□□□ 1.65
CBWD3-202ENST00000377342 HAND2P61296 217 aa25.38■■□□□ 1.65
CBWD3-202ENST00000377342 RASA3Q14644 834 aa25.38■■□□□ 1.65
CBWD3-202ENST00000377342 C12orf60Q5U649 245 aa25.38■■□□□ 1.65
CBWD3-202ENST00000377342 CREB3L3Q68CJ9 461 aa25.38■■□□□ 1.65
CBWD3-202ENST00000377342 ZC3H15Q8WU90 426 aaKnown RBP25.38■■□□□ 1.65
CBWD3-202ENST00000377342 CTNNA3Q9UI47 895 aa25.38■■□□□ 1.65
CBWD3-202ENST00000377342 SLC27A2O14975 620 aa25.37■■□□□ 1.65
CBWD3-202ENST00000377342 PLCD1P51178 756 aa25.37■■□□□ 1.65
CBWD3-202ENST00000377342 TNFAIP1Q13829 316 aa25.37■■□□□ 1.65
CBWD3-202ENST00000377342 PPARAQ07869 468 aa25.36■■□□□ 1.65
CBWD3-202ENST00000377342 TBC1D10CQ8IV04 446 aa25.36■■□□□ 1.65
CBWD3-202ENST00000377342 TEPSINQ96N21 525 aa25.36■■□□□ 1.65
CBWD3-202ENST00000377342 TNNI2P48788 182 aa25.36■■□□□ 1.65
CBWD3-202ENST00000377342 RASEFQ8IZ41 740 aa25.36■■□□□ 1.65
CBWD3-202ENST00000377342 KCNB2Q92953 911 aa25.36■■□□□ 1.65
CBWD3-202ENST00000377342 DEFB129Q9H1M3 183 aa25.36■■□□□ 1.65
CBWD3-202ENST00000377342 ANAPC4Q9UJX5 808 aa25.36■■□□□ 1.65
CBWD3-202ENST00000377342 TACC3Q9Y6A5 838 aa25.36■■□□□ 1.65
CBWD3-202ENST00000377342 SSC5DA1L4H1 1573 aa25.35■■□□□ 1.65
CBWD3-202ENST00000377342 MINDY4BA8MYZ0 360 aa25.35■■□□□ 1.65
CBWD3-202ENST00000377342 IMMTQ16891 758 aaKnown RBP25.35■■□□□ 1.65
CBWD3-202ENST00000377342 POLR3DP05423 398 aaPredicted RBP25.34■■□□□ 1.65
CBWD3-202ENST00000377342 CTDSPL2Q05D32 466 aa25.34■■□□□ 1.65
CBWD3-202ENST00000377342 DHX36Q9H2U1 1008 aaKnown RBP25.34■■□□□ 1.65
CBWD3-202ENST00000377342 ADM5C9JUS6 153 aa25.33■■□□□ 1.65
CBWD3-202ENST00000377342 ZNF213O14771 459 aa25.33■■□□□ 1.65
CBWD3-202ENST00000377342 SLURP2P0DP57 97 aa25.33■■□□□ 1.65
CBWD3-202ENST00000377342 STOX1Q6ZVD7 989 aa25.33■■□□□ 1.65
CBWD3-202ENST00000377342 DCPSQ96C86 337 aaKnown RBP25.33■■□□□ 1.65
CBWD3-202ENST00000377342 C22orf23Q9BZE7 217 aa25.33■■□□□ 1.65
CBWD3-202ENST00000377342 PAPPA2Q9BXP8 1791 aa25.33■■□□□ 1.64
CBWD3-202ENST00000377342 DLK2Q6UY11 383 aa25.32■■□□□ 1.64
CBWD3-202ENST00000377342 ZSCAN29Q8IWY8 852 aaPredicted RBP25.32■■□□□ 1.64
CBWD3-202ENST00000377342 TBC1D32Q96NH3 1257 aa25.32■■□□□ 1.64
CBWD3-202ENST00000377342 CSRNP1Q96S65 589 aa25.32■■□□□ 1.64
CBWD3-202ENST00000377342 UPF2Q9HAU5 1272 aaKnown RBP25.32■■□□□ 1.64
CBWD3-202ENST00000377342 SNX14Q9Y5W7 946 aa25.32■■□□□ 1.64
CBWD3-202ENST00000377342 RBM25P49756 843 aaKnown RBP25.32■■□□□ 1.64
CBWD3-202ENST00000377342 GABPAQ06546 454 aa25.32■■□□□ 1.64
CBWD3-202ENST00000377342 TTC6Q86TZ1 520 aa25.32■■□□□ 1.64
CBWD3-202ENST00000377342 LDHDQ86WU2 507 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms