RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 MROH7-TTC4A0A0A0MT08 1334 aa22.82■■□□□ 1.24
HDAC6-202ENST00000376610 EN2P19622 333 aaPredicted RBP22.81■■□□□ 1.24
HDAC6-202ENST00000376610 HOXD10P28358 340 aa22.81■■□□□ 1.24
HDAC6-202ENST00000376610 GSTO1P78417 241 aa22.81■■□□□ 1.24
HDAC6-202ENST00000376610 PICALMQ13492 652 aa22.81■■□□□ 1.24
HDAC6-202ENST00000376610 SCYL3Q8IZE3 742 aa22.81■■□□□ 1.24
HDAC6-202ENST00000376610 LDHCP07864 332 aa22.8■■□□□ 1.24
HDAC6-202ENST00000376610 FASTKD5Q7L8L6 764 aaKnown RBP22.8■■□□□ 1.24
HDAC6-202ENST00000376610 ZHX2Q9Y6X8 837 aa22.8■■□□□ 1.24
HDAC6-202ENST00000376610 ZSWIM8A7E2V4 1837 aa22.8■■□□□ 1.24
HDAC6-202ENST00000376610 RFX7Q2KHR2 1363 aa22.79■■□□□ 1.24
HDAC6-202ENST00000376610 ATRNL1Q5VV63 1379 aa22.79■■□□□ 1.24
HDAC6-202ENST00000376610 ECM2O94769 699 aaPredicted RBP22.79■■□□□ 1.24
HDAC6-202ENST00000376610 FMNL1O95466 1100 aaPredicted RBP22.79■■□□□ 1.24
HDAC6-202ENST00000376610 PSMC4P43686 418 aa22.79■■□□□ 1.24
HDAC6-202ENST00000376610 MECOMQ03112 1051 aa22.79■■□□□ 1.24
HDAC6-202ENST00000376610 SPATA5Q8NB90 893 aa22.79■■□□□ 1.24
HDAC6-202ENST00000376610 CLUAP1Q96AJ1 413 aa22.79■■□□□ 1.24
HDAC6-202ENST00000376610 PHF20L1A8MW92 1017 aa22.78■■□□□ 1.24
HDAC6-202ENST00000376610 MYCP01106 439 aaPredicted RBP22.78■■□□□ 1.24
HDAC6-202ENST00000376610 SH3TC2Q8TF17 1288 aa22.78■■□□□ 1.24
HDAC6-202ENST00000376610 GPR75-ASB3A0A0A6YYF3 556 aa22.77■■□□□ 1.24
HDAC6-202ENST00000376610 CTNND1O60716 968 aaKnown RBP22.77■■□□□ 1.24
HDAC6-202ENST00000376610 BCAR3O75815 825 aa22.77■■□□□ 1.24
HDAC6-202ENST00000376610 MAP4K4O95819 1239 aaPredicted RBP22.77■■□□□ 1.24
HDAC6-202ENST00000376610 PTPRAP18433 802 aa22.77■■□□□ 1.24
HDAC6-202ENST00000376610 SH3BP5LQ7L8J4 393 aa22.77■■□□□ 1.24
HDAC6-202ENST00000376610 RAET1EQ8TD07 263 aa22.77■■□□□ 1.24
HDAC6-202ENST00000376610 RAI14Q9P0K7 980 aa22.77■■□□□ 1.24
HDAC6-202ENST00000376610 HMG20BQ9P0W2 317 aa22.77■■□□□ 1.24
HDAC6-202ENST00000376610 SRRDQ9UH36 339 aa22.77■■□□□ 1.24
HDAC6-202ENST00000376610 BRCA2P51587 3418 aa22.76■■□□□ 1.23
HDAC6-202ENST00000376610 DDTLA6NHG4 134 aaPredicted RBP22.76■■□□□ 1.23
HDAC6-202ENST00000376610 UQCRFS1P1P0C7P4 283 aa22.76■■□□□ 1.23
HDAC6-202ENST00000376610 MAP3K10Q02779 954 aa22.76■■□□□ 1.23
HDAC6-202ENST00000376610 MOGSQ13724 837 aa22.76■■□□□ 1.23
HDAC6-202ENST00000376610 ZKSCAN2Q63HK3 967 aa22.76■■□□□ 1.23
HDAC6-202ENST00000376610 GADL1Q6ZQY3 521 aa22.76■■□□□ 1.23
HDAC6-202ENST00000376610 TRIM47Q96LD4 638 aa22.76■■□□□ 1.23
HDAC6-202ENST00000376610 DDX4Q9NQI0 724 aaKnown RBP22.76■■□□□ 1.23
HDAC6-202ENST00000376610 DOCK1Q14185 1865 aa22.76■■□□□ 1.23
HDAC6-202ENST00000376610 ADGRA2Q96PE1 1338 aa22.76■■□□□ 1.23
HDAC6-202ENST00000376610 A0A0G2JLL6 359 aaPredicted RBP22.75■■□□□ 1.23
HDAC6-202ENST00000376610 PNMA6EA0A0J9YXQ4 647 aa22.75■■□□□ 1.23
HDAC6-202ENST00000376610 ARID4AP29374 1257 aaPredicted RBP22.75■■□□□ 1.23
HDAC6-202ENST00000376610 PRRT2Q7Z6L0 340 aaPredicted RBP22.75■■□□□ 1.23
HDAC6-202ENST00000376610 NOL10Q9BSC4 688 aaKnown RBP22.75■■□□□ 1.23
HDAC6-202ENST00000376610 PCDH10Q9P2E7 1040 aa22.75■■□□□ 1.23
HDAC6-202ENST00000376610 MKI67P46013 3256 aaKnown RBP22.74■■□□□ 1.23
HDAC6-202ENST00000376610 NPM3O75607 178 aaKnown RBP22.74■■□□□ 1.23
HDAC6-202ENST00000376610 CYP2C8P10632 490 aa22.74■■□□□ 1.23
HDAC6-202ENST00000376610 OSBPP22059 807 aa22.74■■□□□ 1.23
HDAC6-202ENST00000376610 FCGRTP55899 365 aa22.74■■□□□ 1.23
HDAC6-202ENST00000376610 OS9Q13438 667 aaPredicted RBP22.74■■□□□ 1.23
HDAC6-202ENST00000376610 GPAT2Q6NUI2 795 aa22.74■■□□□ 1.23
HDAC6-202ENST00000376610 NSUN4Q96CB9 384 aaKnown RBP22.74■■□□□ 1.23
HDAC6-202ENST00000376610 LRP2BPQ9P2M1 347 aa22.74■■□□□ 1.23
HDAC6-202ENST00000376610 AFG3L2Q9Y4W6 797 aa22.74■■□□□ 1.23
HDAC6-202ENST00000376610 MYPNQ86TC9 1320 aa22.74■■□□□ 1.23
HDAC6-202ENST00000376610 RHBDL3P58872 404 aa22.73■■□□□ 1.23
HDAC6-202ENST00000376610 PI16Q6UXB8 463 aa22.73■■□□□ 1.23
HDAC6-202ENST00000376610 TBC1D9Q6ZT07 1266 aa22.73■■□□□ 1.23
HDAC6-202ENST00000376610 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.73■■□□□ 1.23
HDAC6-202ENST00000376610 TNNQ9UQP3 1299 aa22.73■■□□□ 1.23
HDAC6-202ENST00000376610 SLC45A1Q9Y2W3 748 aa22.73■■□□□ 1.23
HDAC6-202ENST00000376610 TRIM75PA6NK02 468 aa22.72■■□□□ 1.23
HDAC6-202ENST00000376610 TBC1D12O60347 775 aa22.72■■□□□ 1.23
HDAC6-202ENST00000376610 BCRP11274 1271 aa22.72■■□□□ 1.23
HDAC6-202ENST00000376610 GRK4P32298 578 aa22.72■■□□□ 1.23
HDAC6-202ENST00000376610 FTSJ3Q8IY81 847 aaKnown RBP22.72■■□□□ 1.23
HDAC6-202ENST00000376610 TMEM57Q8N5G2 664 aa22.72■■□□□ 1.23
HDAC6-202ENST00000376610 SMCR8Q8TEV9 937 aaPredicted RBP22.72■■□□□ 1.23
HDAC6-202ENST00000376610 BIN2Q9UBW5 565 aaPredicted RBP22.72■■□□□ 1.23
HDAC6-202ENST00000376610 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.72■■□□□ 1.23
HDAC6-202ENST00000376610 PTPRFP10586 1907 aa22.72■■□□□ 1.23
HDAC6-202ENST00000376610 CTGFP29279 349 aa22.71■■□□□ 1.23
HDAC6-202ENST00000376610 MCAMP43121 646 aa22.71■■□□□ 1.23
HDAC6-202ENST00000376610 CCDC158Q5M9N0 1113 aa22.71■■□□□ 1.23
HDAC6-202ENST00000376610 TTC39AQ5SRH9 613 aa22.71■■□□□ 1.23
HDAC6-202ENST00000376610 TEX11Q8IYF3 940 aa22.71■■□□□ 1.23
HDAC6-202ENST00000376610 ZNF384Q8TF68 577 aa22.71■■□□□ 1.23
HDAC6-202ENST00000376610 CEP290O15078 2479 aa22.71■■□□□ 1.23
HDAC6-202ENST00000376610 MGAMO43451 1857 aa22.71■■□□□ 1.23
HDAC6-202ENST00000376610 UBXN2AP68543 259 aa22.7■■□□□ 1.22
HDAC6-202ENST00000376610 NKX2-3Q8TAU0 364 aa22.7■■□□□ 1.22
HDAC6-202ENST00000376610 OSBPL5Q9H0X9 879 aaPredicted RBP22.7■■□□□ 1.22
HDAC6-202ENST00000376610 GPR108Q9NPR9 543 aa22.7■■□□□ 1.22
HDAC6-202ENST00000376610 COL2A1P02458 1487 aaPredicted RBP22.7■■□□□ 1.22
HDAC6-202ENST00000376610 PHIPQ8WWQ0 1821 aa22.69■■□□□ 1.22
HDAC6-202ENST00000376610 BAG3O95817 575 aa22.69■■□□□ 1.22
HDAC6-202ENST00000376610 PNMA3Q9UL41 463 aa22.69■■□□□ 1.22
HDAC6-202ENST00000376610 SLURP2P0DP57 97 aa22.68■■□□□ 1.22
HDAC6-202ENST00000376610 PLCG2P16885 1265 aa22.68■■□□□ 1.22
HDAC6-202ENST00000376610 PRKCZQ05513 592 aa22.68■■□□□ 1.22
HDAC6-202ENST00000376610 TNNI3KQ59H18 835 aa22.68■■□□□ 1.22
HDAC6-202ENST00000376610 NAA16Q6N069 864 aaPredicted RBP22.68■■□□□ 1.22
HDAC6-202ENST00000376610 TBC1D2Q9BYX2 928 aa22.68■■□□□ 1.22
HDAC6-202ENST00000376610 AGTPBP1Q9UPW5 1226 aa22.68■■□□□ 1.22
HDAC6-202ENST00000376610 FPGT-TNNI3KV9GXZ4 949 aa22.68■■□□□ 1.22
HDAC6-202ENST00000376610 FAM196BA6NMK8 535 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms