RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 ZNF384Q8TF68 577 aa18.52■□□□□ 0.56
CLCN6-204ENST00000376491 PHIPQ8WWQ0 1821 aa18.51■□□□□ 0.55
CLCN6-204ENST00000376491 GNRH1P01148 92 aa18.51■□□□□ 0.55
CLCN6-204ENST00000376491 PSMC4P43686 418 aa18.51■□□□□ 0.55
CLCN6-204ENST00000376491 SLC4A8Q2Y0W8 1093 aa18.51■□□□□ 0.55
CLCN6-204ENST00000376491 SCYL3Q8IZE3 742 aa18.51■□□□□ 0.55
CLCN6-204ENST00000376491 PCDH10Q9P2E7 1040 aa18.51■□□□□ 0.55
CLCN6-204ENST00000376491 AKAP2Q9Y2D5 859 aa18.51■□□□□ 0.55
CLCN6-204ENST00000376491 MGAMO43451 1857 aa18.51■□□□□ 0.55
CLCN6-204ENST00000376491 DOCK1Q14185 1865 aa18.5■□□□□ 0.55
CLCN6-204ENST00000376491 CXCL11O14625 94 aa18.5■□□□□ 0.55
CLCN6-204ENST00000376491 TRIM27P14373 513 aa18.5■□□□□ 0.55
CLCN6-204ENST00000376491 PTPRAP18433 802 aa18.5■□□□□ 0.55
CLCN6-204ENST00000376491 BTDP43251 543 aa18.5■□□□□ 0.55
CLCN6-204ENST00000376491 PRMT2P55345 433 aa18.5■□□□□ 0.55
CLCN6-204ENST00000376491 ZSCAN29Q8IWY8 852 aaPredicted RBP18.5■□□□□ 0.55
CLCN6-204ENST00000376491 TRIM47Q96LD4 638 aa18.5■□□□□ 0.55
CLCN6-204ENST00000376491 MROH7-TTC4A0A0A0MT08 1334 aa18.49■□□□□ 0.55
CLCN6-204ENST00000376491 GPR75-ASB3A0A0A6YYF3 556 aa18.49■□□□□ 0.55
CLCN6-204ENST00000376491 BCAR3O75815 825 aa18.49■□□□□ 0.55
CLCN6-204ENST00000376491 CYP2C8P10632 490 aa18.49■□□□□ 0.55
CLCN6-204ENST00000376491 OSBPP22059 807 aa18.49■□□□□ 0.55
CLCN6-204ENST00000376491 RHBDL3P58872 404 aa18.49■□□□□ 0.55
CLCN6-204ENST00000376491 MECOMQ03112 1051 aa18.49■□□□□ 0.55
CLCN6-204ENST00000376491 MVPQ14764 893 aaKnown RBP18.49■□□□□ 0.55
CLCN6-204ENST00000376491 SPTY2D1Q68D10 685 aaPredicted RBP18.49■□□□□ 0.55
CLCN6-204ENST00000376491 PI16Q6UXB8 463 aa18.49■□□□□ 0.55
CLCN6-204ENST00000376491 ERICH6Q7L0X2 663 aa18.49■□□□□ 0.55
CLCN6-204ENST00000376491 SLF2Q8IX21 1173 aa18.49■□□□□ 0.55
CLCN6-204ENST00000376491 NEUROD6Q96NK8 337 aa18.49■□□□□ 0.55
CLCN6-204ENST00000376491 HMG20BQ9P0W2 317 aa18.49■□□□□ 0.55
CLCN6-204ENST00000376491 SRRDQ9UH36 339 aa18.49■□□□□ 0.55
CLCN6-204ENST00000376491 ZHX2Q9Y6X8 837 aa18.49■□□□□ 0.55
CLCN6-204ENST00000376491 A0A0G2JLL6 359 aaPredicted RBP18.48■□□□□ 0.55
CLCN6-204ENST00000376491 PNMA6EA0A0J9YXQ4 647 aa18.48■□□□□ 0.55
CLCN6-204ENST00000376491 BCRP11274 1271 aa18.48■□□□□ 0.55
CLCN6-204ENST00000376491 PICALMQ13492 652 aa18.48■□□□□ 0.55
CLCN6-204ENST00000376491 MTFR1Q15390 333 aa18.48■□□□□ 0.55
CLCN6-204ENST00000376491 PRRT2Q7Z6L0 340 aaPredicted RBP18.48■□□□□ 0.55
CLCN6-204ENST00000376491 GCC1Q96CN9 775 aa18.48■□□□□ 0.55
CLCN6-204ENST00000376491 PARK7Q99497 189 aaKnown RBP18.48■□□□□ 0.55
CLCN6-204ENST00000376491 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.48■□□□□ 0.55
CLCN6-204ENST00000376491 AFG3L2Q9Y4W6 797 aa18.48■□□□□ 0.55
CLCN6-204ENST00000376491 ATF7IPQ6VMQ6 1270 aa18.47■□□□□ 0.55
CLCN6-204ENST00000376491 TBC1D9Q6ZT07 1266 aa18.47■□□□□ 0.55
CLCN6-204ENST00000376491 PICK1Q9NRD5 415 aa18.47■□□□□ 0.55
CLCN6-204ENST00000376491 DOCK3Q8IZD9 2030 aa18.46■□□□□ 0.55
CLCN6-204ENST00000376491 IPO8O15397 1037 aaKnown RBP18.46■□□□□ 0.55
CLCN6-204ENST00000376491 CTNND1O60716 968 aaKnown RBP18.46■□□□□ 0.55
CLCN6-204ENST00000376491 FMNL1O95466 1100 aaPredicted RBP18.46■□□□□ 0.55
CLCN6-204ENST00000376491 GNAI2P04899 355 aa18.46■□□□□ 0.55
CLCN6-204ENST00000376491 HOXD10P28358 340 aa18.46■□□□□ 0.55
CLCN6-204ENST00000376491 HABP4Q5JVS0 413 aaKnown RBP18.46■□□□□ 0.55
CLCN6-204ENST00000376491 CCDC84Q86UT8 332 aaPredicted RBP18.46■□□□□ 0.55
CLCN6-204ENST00000376491 SPATA5Q8NB90 893 aa18.46■□□□□ 0.55
CLCN6-204ENST00000376491 FRAT1Q92837 279 aaPredicted RBP18.46■□□□□ 0.55
CLCN6-204ENST00000376491 CLUAP1Q96AJ1 413 aa18.46■□□□□ 0.55
CLCN6-204ENST00000376491 NSUN4Q96CB9 384 aaKnown RBP18.46■□□□□ 0.55
CLCN6-204ENST00000376491 MYPNQ86TC9 1320 aa18.46■□□□□ 0.55
CLCN6-204ENST00000376491 ARID4AP29374 1257 aaPredicted RBP18.45■□□□□ 0.54
CLCN6-204ENST00000376491 FASTKD5Q7L8L6 764 aaKnown RBP18.45■□□□□ 0.54
CLCN6-204ENST00000376491 SHISA4Q96DD7 197 aa18.45■□□□□ 0.54
CLCN6-204ENST00000376491 FAM196BA6NMK8 535 aa18.44■□□□□ 0.54
CLCN6-204ENST00000376491 TBC1D12O60347 775 aa18.44■□□□□ 0.54
CLCN6-204ENST00000376491 NPM3O75607 178 aaKnown RBP18.44■□□□□ 0.54
CLCN6-204ENST00000376491 GRK4P32298 578 aa18.44■□□□□ 0.54
CLCN6-204ENST00000376491 MCAMP43121 646 aa18.44■□□□□ 0.54
CLCN6-204ENST00000376491 PRKCZQ05513 592 aa18.44■□□□□ 0.54
CLCN6-204ENST00000376491 G3BP1Q13283 466 aaKnown RBP eCLIP18.44■□□□□ 0.54
CLCN6-204ENST00000376491 GADL1Q6ZQY3 521 aa18.44■□□□□ 0.54
CLCN6-204ENST00000376491 RAET1EQ8TD07 263 aa18.44■□□□□ 0.54
CLCN6-204ENST00000376491 ATAD5Q96QE3 1844 aa18.44■□□□□ 0.54
CLCN6-204ENST00000376491 MYO5AQ9Y4I1 1855 aaKnown RBP18.43■□□□□ 0.54
CLCN6-204ENST00000376491 FCGRTP55899 365 aa18.43■□□□□ 0.54
CLCN6-204ENST00000376491 GORABQ5T7V8 394 aa18.43■□□□□ 0.54
CLCN6-204ENST00000376491 GABRQQ9UN88 632 aa18.43■□□□□ 0.54
CLCN6-204ENST00000376491 TRIM75PA6NK02 468 aa18.42■□□□□ 0.54
CLCN6-204ENST00000376491 LDHCP07864 332 aa18.42■□□□□ 0.54
CLCN6-204ENST00000376491 RRP1BQ14684 758 aaKnown RBP18.42■□□□□ 0.54
CLCN6-204ENST00000376491 TMEM57Q8N5G2 664 aa18.42■□□□□ 0.54
CLCN6-204ENST00000376491 RAI14Q9P0K7 980 aa18.42■□□□□ 0.54
CLCN6-204ENST00000376491 SLC45A1Q9Y2W3 748 aa18.42■□□□□ 0.54
CLCN6-204ENST00000376491 GSTO1P78417 241 aa18.41■□□□□ 0.54
CLCN6-204ENST00000376491 POLA2Q14181 598 aa18.41■□□□□ 0.54
CLCN6-204ENST00000376491 OSBPL5Q9H0X9 879 aaPredicted RBP18.41■□□□□ 0.54
CLCN6-204ENST00000376491 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.41■□□□□ 0.54
CLCN6-204ENST00000376491 SIPA1L1O43166 1804 aa18.41■□□□□ 0.54
CLCN6-204ENST00000376491 CDK5RAP2Q96SN8 1893 aa18.41■□□□□ 0.54
CLCN6-204ENST00000376491 COL2A1P02458 1487 aaPredicted RBP18.4■□□□□ 0.54
CLCN6-204ENST00000376491 CEP290O15078 2479 aa18.4■□□□□ 0.54
CLCN6-204ENST00000376491 MAP4K4O95819 1239 aaPredicted RBP18.4■□□□□ 0.54
CLCN6-204ENST00000376491 UQCRFS1P1P0C7P4 283 aa18.4■□□□□ 0.54
CLCN6-204ENST00000376491 CCL5P13501 91 aa18.4■□□□□ 0.54
CLCN6-204ENST00000376491 TREML2Q5T2D2 321 aa18.4■□□□□ 0.54
CLCN6-204ENST00000376491 GJB1P08034 283 aa18.39■□□□□ 0.53
CLCN6-204ENST00000376491 GJA8P48165 433 aa18.39■□□□□ 0.53
CLCN6-204ENST00000376491 TNNI3KQ59H18 835 aa18.39■□□□□ 0.53
CLCN6-204ENST00000376491 ZKSCAN2Q63HK3 967 aa18.39■□□□□ 0.53
CLCN6-204ENST00000376491 SH3RF3Q8TEJ3 882 aaPredicted RBP18.39■□□□□ 0.53
CLCN6-204ENST00000376491 DBNDD2Q9BQY9 259 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms