RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 KLF18A0A0U1RQI7 1052 aa9.87□□□□□ -0.83
SHROOM4-202ENST00000376020 IKQ13123 557 aaPredicted RBP9.87□□□□□ -0.83
SHROOM4-202ENST00000376020 CCDC62Q6P9F0 684 aa9.87□□□□□ -0.83
SHROOM4-202ENST00000376020 QRICH2Q9H0J4 1663 aa9.87□□□□□ -0.83
SHROOM4-202ENST00000376020 ZEB2O60315 1214 aa9.87□□□□□ -0.83
SHROOM4-202ENST00000376020 ZNF202O95125 648 aa9.87□□□□□ -0.83
SHROOM4-202ENST00000376020 TRPC3Q13507 836 aa9.87□□□□□ -0.83
SHROOM4-202ENST00000376020 TERF2Q15554 542 aa9.87□□□□□ -0.83
SHROOM4-202ENST00000376020 C10orf76Q5T2E6 689 aa9.87□□□□□ -0.83
SHROOM4-202ENST00000376020 Q6ZUG5 572 aa9.87□□□□□ -0.83
SHROOM4-202ENST00000376020 FAM114A2Q9NRY5 505 aa9.87□□□□□ -0.83
SHROOM4-202ENST00000376020 PTPDC1A2A3K4 754 aa9.87□□□□□ -0.83
SHROOM4-202ENST00000376020 ZBTB16Q05516 673 aa9.87□□□□□ -0.83
SHROOM4-202ENST00000376020 BAZ2BQ9UIF8 2168 aaKnown RBP9.87□□□□□ -0.83
SHROOM4-202ENST00000376020 SNRPA1P09661 255 aaKnown RBP9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 CCDC152Q4G0S7 254 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 MCM10Q7L590 875 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 PPP1R14CQ8TAE6 165 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 TBC1D31Q96DN5 1066 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 CUEDC2Q9H467 287 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 STAP2Q9UGK3 403 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 DDX41Q9UJV9 622 aaKnown RBP9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 CDK12Q9NYV4 1490 aaPredicted RBP9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 GON4LQ3T8J9 2241 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 U2AF2P26368 475 aaKnown RBP eCLIP9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 NBPF10Q6P3W6 841 aaKnown RBP9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 SECISBP2LQ93073 1101 aaKnown RBP9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 PAG1Q9NWQ8 432 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 ZRANB1Q9UGI0 708 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 GUCA1BQ9UMX6 200 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 PPP1R2P3Q6NXS1 205 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 RNF10Q8N5U6 811 aaKnown RBP9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 VTI1AQ96AJ9 217 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 VCX3AQ9NNX9 186 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 TMEM63CQ9P1W3 806 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 CPSF1Q10570 1443 aaKnown RBP9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 KRT2P35908 639 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 LRCH2Q5VUJ6 765 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 POLR3EQ9NVU0 708 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 BCCIPQ9P287 314 aaKnown RBP eCLIP9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 AATKQ6ZMQ8 1374 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 GAS8O95995 478 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 EIF3BP55884 814 aaKnown RBP9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 MEIS3Q99687 375 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 ANAPC4Q9UJX5 808 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 MYO10Q9HD67 2058 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 MAP3K4Q9Y6R4 1608 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 GLE1Q53GS7 698 aaKnown RBP9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 HS2ST1Q7LGA3 356 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 SEC62Q99442 399 aaKnown RBP9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 MYH6P13533 1939 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 SBNO1A3KN83 1393 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 PCK1P35558 622 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 GALNT17Q6IS24 598 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 ANKLE2Q86XL3 938 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 WHAMMQ8TF30 809 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 ZC3H15Q8WU90 426 aaKnown RBP9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 DSCC1Q9BVC3 393 aa9.86□□□□□ -0.83
SHROOM4-202ENST00000376020 MED14O60244 1454 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 SMARCA5O60264 1052 aaPredicted RBP9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 CFAP157Q5JU67 520 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 CRNKL1Q9BZJ0 848 aaKnown RBP9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 ZNF215Q9UL58 517 aaPredicted RBP9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 ST5P78524 1137 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 TXNDC2Q86VQ3 553 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 TUBB6Q9BUF5 446 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 BCORL1Q5H9F3 1711 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 GOLGA8QA0A0J9YX86 632 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 PI4KAP2A4QPH2 592 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 GOLGA8OA6NCC3 632 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 GOLGA8NF8WBI6 632 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 HSPA6P17066 643 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 ICE2Q659A1 982 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 PI4KAP1Q8N8J0 262 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 RNF40O75150 1001 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 JRKLQ9Y4A0 524 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 E9PCH4 1651 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 SSBP05455 408 aaKnown RBP eCLIP9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 DNM2P50570 870 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 CAPS2Q9BXY5 557 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 CDC23Q9UJX2 597 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 A0A1W2PP64 1363 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 EEF1GP26641 437 aaKnown RBP9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 ZNF76P36508 570 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 SEL1L2Q5TEA6 688 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 RAB11FIP4Q86YS3 637 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 MKNK2Q9HBH9 465 aa9.85□□□□□ -0.83
SHROOM4-202ENST00000376020 ADGRF5Q8IZF2 1346 aa9.84□□□□□ -0.83
SHROOM4-202ENST00000376020 SEMA3EO15041 775 aa9.84□□□□□ -0.83
SHROOM4-202ENST00000376020 SMC1BQ8NDV3 1235 aa9.84□□□□□ -0.83
SHROOM4-202ENST00000376020 LZTFL1Q9NQ48 299 aa9.84□□□□□ -0.83
SHROOM4-202ENST00000376020 LGSNQ5TDP6 509 aa9.84□□□□□ -0.83
SHROOM4-202ENST00000376020 DENND2CQ68D51 928 aa9.84□□□□□ -0.83
SHROOM4-202ENST00000376020 POLR3DP05423 398 aaPredicted RBP9.84□□□□□ -0.83
SHROOM4-202ENST00000376020 PLEKHG1Q9ULL1 1385 aa9.84□□□□□ -0.83
SHROOM4-202ENST00000376020 RNF113AO15541 343 aaKnown RBP9.84□□□□□ -0.83
SHROOM4-202ENST00000376020 RRS1Q15050 365 aaKnown RBP9.84□□□□□ -0.83
SHROOM4-202ENST00000376020 DTHD1Q6ZMT9 781 aa9.84□□□□□ -0.83
SHROOM4-202ENST00000376020 MYH11P35749 1972 aa9.84□□□□□ -0.83
SHROOM4-202ENST00000376020 KRT13P13646 458 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms