RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 RAI14Q9P0K7 980 aa19.13■□□□□ 0.65
SDHB-201ENST00000375499 SNCAIPQ9Y6H5 919 aa19.13■□□□□ 0.65
SDHB-201ENST00000375499 GPR75-ASB3A0A0A6YYF3 556 aa19.12■□□□□ 0.65
SDHB-201ENST00000375499 MAP3K9P80192 1104 aa19.12■□□□□ 0.65
SDHB-201ENST00000375499 IFNL1Q8IU54 200 aa19.12■□□□□ 0.65
SDHB-201ENST00000375499 ERC1Q8IUD2 1116 aa19.12■□□□□ 0.65
SDHB-201ENST00000375499 ZNF512BQ96KM6 892 aaPredicted RBP19.12■□□□□ 0.65
SDHB-201ENST00000375499 WRNIP1Q96S55 665 aa19.12■□□□□ 0.65
SDHB-201ENST00000375499 IDI2Q9BXS1 227 aa19.12■□□□□ 0.65
SDHB-201ENST00000375499 PIH1D3Q9NQM4 214 aaKnown RBP19.12■□□□□ 0.65
SDHB-201ENST00000375499 IGF2BP3O00425 579 aaKnown RBP eCLIP19.11■□□□□ 0.65
SDHB-201ENST00000375499 INPP5BP32019 993 aa19.11■□□□□ 0.65
SDHB-201ENST00000375499 HABP4Q5JVS0 413 aaKnown RBP19.11■□□□□ 0.65
SDHB-201ENST00000375499 ADGRA1Q86SQ6 560 aa19.11■□□□□ 0.65
SDHB-201ENST00000375499 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.11■□□□□ 0.65
SDHB-201ENST00000375499 ZKSCAN4Q969J2 545 aaPredicted RBP19.11■□□□□ 0.65
SDHB-201ENST00000375499 ERO1AQ96HE7 468 aa19.11■□□□□ 0.65
SDHB-201ENST00000375499 SIPA1L1O43166 1804 aa19.1■□□□□ 0.65
SDHB-201ENST00000375499 PICALMQ13492 652 aa19.1■□□□□ 0.65
SDHB-201ENST00000375499 SLF2Q8IX21 1173 aa19.1■□□□□ 0.65
SDHB-201ENST00000375499 LRP2BPQ9P2M1 347 aa19.1■□□□□ 0.65
SDHB-201ENST00000375499 TRIM17Q9Y577 477 aa19.1■□□□□ 0.65
SDHB-201ENST00000375499 FOCADQ5VW36 1801 aa19.09■□□□□ 0.65
SDHB-201ENST00000375499 KIAA0100Q14667 2235 aaKnown RBP19.09■□□□□ 0.65
SDHB-201ENST00000375499 DDTLA6NHG4 134 aaPredicted RBP19.09■□□□□ 0.65
SDHB-201ENST00000375499 HMMRO75330 724 aa19.09■□□□□ 0.65
SDHB-201ENST00000375499 ENTPD3O75355 529 aa19.09■□□□□ 0.65
SDHB-201ENST00000375499 OTOP1Q7RTM1 612 aa19.09■□□□□ 0.65
SDHB-201ENST00000375499 KIF1BPQ96EK5 621 aa19.09■□□□□ 0.65
SDHB-201ENST00000375499 MS4A4AQ96JQ5 239 aa19.09■□□□□ 0.65
SDHB-201ENST00000375499 PTPN18Q99952 460 aa19.09■□□□□ 0.65
SDHB-201ENST00000375499 ANTXR1Q9H6X2 564 aa19.09■□□□□ 0.65
SDHB-201ENST00000375499 SPDYE5A6NIY4 337 aa19.08■□□□□ 0.64
SDHB-201ENST00000375499 RRP1P56182 461 aaKnown RBP19.08■□□□□ 0.64
SDHB-201ENST00000375499 ARHGEF6Q15052 776 aa19.08■□□□□ 0.64
SDHB-201ENST00000375499 HSP90AB4PQ58FF6 505 aa19.08■□□□□ 0.64
SDHB-201ENST00000375499 DCAF15Q66K64 600 aa19.08■□□□□ 0.64
SDHB-201ENST00000375499 OTUD5Q96G74 571 aa19.08■□□□□ 0.64
SDHB-201ENST00000375499 ZNF341Q9BYN7 854 aa19.08■□□□□ 0.64
SDHB-201ENST00000375499 ZNF112Q9UJU3 913 aa19.08■□□□□ 0.64
SDHB-201ENST00000375499 CSADQ9Y600 493 aa19.08■□□□□ 0.64
SDHB-201ENST00000375499 GSTO1P78417 241 aa19.07■□□□□ 0.64
SDHB-201ENST00000375499 NAA16Q6N069 864 aaPredicted RBP19.07■□□□□ 0.64
SDHB-201ENST00000375499 BRI3BPQ8WY22 251 aa19.07■□□□□ 0.64
SDHB-201ENST00000375499 BCL11AQ9H165 835 aa19.07■□□□□ 0.64
SDHB-201ENST00000375499 CHMP4BQ9H444 224 aaKnown RBP19.07■□□□□ 0.64
SDHB-201ENST00000375499 AATFQ9NY61 560 aaKnown RBP eCLIP19.07■□□□□ 0.64
SDHB-201ENST00000375499 PTPN22Q9Y2R2 807 aa19.07■□□□□ 0.64
SDHB-201ENST00000375499 TESPA1A2RU30 521 aaPredicted RBP19.06■□□□□ 0.64
SDHB-201ENST00000375499 LDHCP07864 332 aa19.06■□□□□ 0.64
SDHB-201ENST00000375499 SH3RF3Q8TEJ3 882 aaPredicted RBP19.06■□□□□ 0.64
SDHB-201ENST00000375499 ARMC5Q96C12 935 aa19.06■□□□□ 0.64
SDHB-201ENST00000375499 HOOK2Q96ED9 719 aa19.06■□□□□ 0.64
SDHB-201ENST00000375499 DOCK1Q14185 1865 aa19.05■□□□□ 0.64
SDHB-201ENST00000375499 PHF20L1A8MW92 1017 aa19.05■□□□□ 0.64
SDHB-201ENST00000375499 ERO1BQ86YB8 467 aa19.05■□□□□ 0.64
SDHB-201ENST00000375499 PHIPQ8WWQ0 1821 aa19.04■□□□□ 0.64
SDHB-201ENST00000375499 FAM196BA6NMK8 535 aa19.04■□□□□ 0.64
SDHB-201ENST00000375499 IRF6O14896 467 aa19.04■□□□□ 0.64
SDHB-201ENST00000375499 SMARCA5O60264 1052 aaPredicted RBP19.04■□□□□ 0.64
SDHB-201ENST00000375499 RAB11FIP3O75154 756 aa19.04■□□□□ 0.64
SDHB-201ENST00000375499 IDH1O75874 414 aaKnown RBP19.04■□□□□ 0.64
SDHB-201ENST00000375499 ZSCAN29Q8IWY8 852 aaPredicted RBP19.04■□□□□ 0.64
SDHB-201ENST00000375499 TEX11Q8IYF3 940 aa19.04■□□□□ 0.64
SDHB-201ENST00000375499 CLASRPQ8N2M8 674 aaKnown RBP19.04■□□□□ 0.64
SDHB-201ENST00000375499 OSBPL5Q9H0X9 879 aaPredicted RBP19.04■□□□□ 0.64
SDHB-201ENST00000375499 EFCC1Q9HA90 598 aa19.04■□□□□ 0.64
SDHB-201ENST00000375499 PTPRFP10586 1907 aa19.04■□□□□ 0.64
SDHB-201ENST00000375499 COL2A1P02458 1487 aaPredicted RBP19.03■□□□□ 0.64
SDHB-201ENST00000375499 ATAD5Q96QE3 1844 aa19.03■□□□□ 0.64
SDHB-201ENST00000375499 CCL15-CCL14A0A0B4J2E2 113 aa19.03■□□□□ 0.64
SDHB-201ENST00000375499 POTEFA5A3E0 1075 aa19.03■□□□□ 0.64
SDHB-201ENST00000375499 NPM3O75607 178 aaKnown RBP19.03■□□□□ 0.64
SDHB-201ENST00000375499 DYNLL1P63167 89 aaKnown RBP19.03■□□□□ 0.64
SDHB-201ENST00000375499 SP3Q02447 781 aa19.03■□□□□ 0.64
SDHB-201ENST00000375499 MAP3K10Q02779 954 aa19.03■□□□□ 0.64
SDHB-201ENST00000375499 CCL15Q16663 113 aa19.03■□□□□ 0.64
SDHB-201ENST00000375499 NOL9Q5SY16 702 aaKnown RBP19.03■□□□□ 0.64
SDHB-201ENST00000375499 NBPF11Q86T75 865 aa19.03■□□□□ 0.64
SDHB-201ENST00000375499 EDC3Q96F86 508 aaKnown RBP19.03■□□□□ 0.64
SDHB-201ENST00000375499 TMEM106CQ9BVX2 250 aa19.03■□□□□ 0.64
SDHB-201ENST00000375499 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.03■□□□□ 0.64
SDHB-201ENST00000375499 PCDHB15Q9Y5E8 787 aa19.03■□□□□ 0.64
SDHB-201ENST00000375499 RBBP6Q7Z6E9 1792 aaKnown RBP19.03■□□□□ 0.64
SDHB-201ENST00000375499 CYP7A1P22680 504 aa19.02■□□□□ 0.64
SDHB-201ENST00000375499 GTF2A2P52657 109 aa19.02■□□□□ 0.64
SDHB-201ENST00000375499 PPP4CP60510 307 aa19.02■□□□□ 0.64
SDHB-201ENST00000375499 CRHR2Q13324 411 aa19.02■□□□□ 0.64
SDHB-201ENST00000375499 PPIL2Q13356 520 aa19.02■□□□□ 0.64
SDHB-201ENST00000375499 FAM43AQ8N2R8 423 aa19.02■□□□□ 0.64
SDHB-201ENST00000375499 MAGEB6Q8N7X4 407 aa19.02■□□□□ 0.64
SDHB-201ENST00000375499 HTTP42858 3142 aa19.02■□□□□ 0.63
SDHB-201ENST00000375499 DDX60LQ5H9U9 1706 aaKnown RBP19.01■□□□□ 0.63
SDHB-201ENST00000375499 IFIT2P09913 472 aaKnown RBP19.01■□□□□ 0.63
SDHB-201ENST00000375499 MIGA1Q8NAN2 632 aa19.01■□□□□ 0.63
SDHB-201ENST00000375499 FLT1P17948 1338 aa19■□□□□ 0.63
SDHB-201ENST00000375499 ZSWIM8A7E2V4 1837 aa19■□□□□ 0.63
SDHB-201ENST00000375499 MYH1P12882 1939 aa19■□□□□ 0.63
SDHB-201ENST00000375499 MAP4K4O95819 1239 aaPredicted RBP19■□□□□ 0.63
SDHB-201ENST00000375499 CAP1Q01518 475 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms