RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 CRACR2BQ8N4Y2 399 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-202ENST00000375340 CUL4AQ13619 759 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 TICAM2Q86XR7 235 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 RPGRQ92834 1020 aaKnown RBP7.41□□□□□ -1.22
SMC1A-202ENST00000375340 IMPACTQ9P2X3 320 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 SERTAD1Q9UHV2 236 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 ANGEL1Q9UNK9 670 aaKnown RBP7.41□□□□□ -1.22
SMC1A-202ENST00000375340 FGFR1OPO95684 399 aaKnown RBP7.41□□□□□ -1.22
SMC1A-202ENST00000375340 ATL3Q6DD88 541 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 GIMAP7Q8NHV1 300 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 GDAP1L1Q96MZ0 367 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 CDC5LQ99459 802 aaKnown RBP7.41□□□□□ -1.22
SMC1A-202ENST00000375340 BABAM1Q9NWV8 329 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 STX8Q9UNK0 236 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 NIP7Q9Y221 180 aaKnown RBP eCLIP7.41□□□□□ -1.22
SMC1A-202ENST00000375340 DYDC1Q8WWB3 177 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 HAUS7Q99871 368 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 IL2RBP14784 551 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 RNASE9P60153 205 aaKnown RBP7.41□□□□□ -1.22
SMC1A-202ENST00000375340 EHBP1Q8NDI1 1231 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 ZNF496Q96IT1 587 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-202ENST00000375340 WWC2Q6AWC2 1192 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 GOLPH3LQ9H4A5 285 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 HSPD1P10809 573 aaKnown RBP7.41□□□□□ -1.22
SMC1A-202ENST00000375340 CCDC122Q5T0U0 273 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 NEK11Q8NG66 645 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 CTNNBL1Q8WYA6 563 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-202ENST00000375340 NAPGQ99747 312 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-202ENST00000375340 TM6SF1Q9BZW5 370 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 KIDINS220Q9ULH0 1771 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 MYO5BQ9ULV0 1848 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 CUTAO60888 179 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 CDC25BP30305 580 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 AMPD3Q01432 767 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 MICALL1Q8N3F8 863 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 VWDEQ8N2E2 1590 aa7.41□□□□□ -1.22
SMC1A-202ENST00000375340 USP8P40818 1118 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 TTLL7Q6ZT98 887 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 NBPF11Q86T75 865 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 ANKRD18AQ8IVF6 992 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 AKR1B10O60218 316 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 ZMYM6O95789 1325 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 GTF2A1P52655 376 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-202ENST00000375340 SEPT7Q16181 437 aaKnown RBP7.4□□□□□ -1.22
SMC1A-202ENST00000375340 NELFBQ8WX92 580 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 VPS54Q9P1Q0 977 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 ANKRD62A6NC57 917 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 EXOC5O00471 708 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 HOXB7P09629 217 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 IPO4Q8TEX9 1081 aaKnown RBP7.4□□□□□ -1.22
SMC1A-202ENST00000375340 DSCC1Q9BVC3 393 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 PUS3Q9BZE2 481 aaKnown RBP7.4□□□□□ -1.22
SMC1A-202ENST00000375340 CYLC1P35663 651 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-202ENST00000375340 DPCR1Q3MIW9 517 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 GRAMD1CQ8IYS0 662 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 DBNLQ9UJU6 430 aaKnown RBP7.4□□□□□ -1.22
SMC1A-202ENST00000375340 SMIM23A6NLE4 172 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 CCNT1O60563 726 aaKnown RBP7.4□□□□□ -1.22
SMC1A-202ENST00000375340 NEFHP12036 1026 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 PDIA3P30101 505 aaKnown RBP7.4□□□□□ -1.22
SMC1A-202ENST00000375340 POLA2Q14181 598 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 HINFPQ9BQA5 517 aa7.4□□□□□ -1.22
SMC1A-202ENST00000375340 TEX13AQ9BXU3 409 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-202ENST00000375340 IGSF1Q8N6C5 1336 aa7.4□□□□□ -1.23
SMC1A-202ENST00000375340 DEPDC5O75140 1603 aa7.4□□□□□ -1.23
SMC1A-202ENST00000375340 SPATA5Q8NB90 893 aa7.4□□□□□ -1.23
SMC1A-202ENST00000375340 CACTINQ8WUQ7 758 aaKnown RBP7.4□□□□□ -1.23
SMC1A-202ENST00000375340 MAP4K1Q92918 833 aa7.4□□□□□ -1.23
SMC1A-202ENST00000375340 PSMB7Q99436 277 aa7.4□□□□□ -1.23
SMC1A-202ENST00000375340 PPP2R2CQ9Y2T4 447 aa7.4□□□□□ -1.23
SMC1A-202ENST00000375340 V9GY48 417 aaPredicted RBP7.4□□□□□ -1.23
SMC1A-202ENST00000375340 PTPRMP28827 1452 aa7.4□□□□□ -1.23
SMC1A-202ENST00000375340 CYP26C1Q6V0L0 522 aa7.4□□□□□ -1.23
SMC1A-202ENST00000375340 KIAA1468Q9P260 1216 aa7.4□□□□□ -1.23
SMC1A-202ENST00000375340 PREX1Q8TCU6 1659 aa7.4□□□□□ -1.23
SMC1A-202ENST00000375340 NBPF5PQ86XG9 351 aaPredicted RBP7.39□□□□□ -1.23
SMC1A-202ENST00000375340 SLF1Q9BQI6 1058 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 ZNF287Q9HBT7 754 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 IVLP07476 585 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 PUM3Q15397 648 aaKnown RBP7.39□□□□□ -1.23
SMC1A-202ENST00000375340 TTC31Q49AM3 519 aaPredicted RBP7.39□□□□□ -1.23
SMC1A-202ENST00000375340 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.39□□□□□ -1.232e-6■■■■■ 105.9
SMC1A-202ENST00000375340 MCM9Q9NXL9 1143 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 NFE2L3Q9Y4A8 694 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 USP32Q8NFA0 1604 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 TOB2Q14106 344 aaPredicted RBP7.39□□□□□ -1.23
SMC1A-202ENST00000375340 RGS22Q8NE09 1264 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 APPBP2Q92624 585 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 PYM1Q9BRP8 204 aaKnown RBP7.39□□□□□ -1.23
SMC1A-202ENST00000375340 PHF23Q9BUL5 403 aaPredicted RBP7.39□□□□□ -1.23
SMC1A-202ENST00000375340 RIMS1Q86UR5 1692 aaKnown RBP7.39□□□□□ -1.23
SMC1A-202ENST00000375340 USP27XA6NNY8 438 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 GNAT2P19087 354 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 DIS3L2Q8IYB7 885 aaKnown RBP7.39□□□□□ -1.23
SMC1A-202ENST00000375340 ZEB2O60315 1214 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 WDHD1O75717 1129 aaPredicted RBP7.39□□□□□ -1.23
SMC1A-202ENST00000375340 DEXIO95424 95 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 MAP2K1Q02750 393 aaPredicted RBP7.39□□□□□ -1.23
SMC1A-202ENST00000375340 CNGA4Q8IV77 575 aa7.39□□□□□ -1.23
SMC1A-202ENST00000375340 TDRD7Q8NHU6 1098 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms