RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CLTCQ00610 1675 aaKnown RBP13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 BEND3Q5T5X7 828 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 NBPF14Q5TI25 921 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 SMAP1Q8IYB5 467 aaPredicted RBP13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 ERMNQ8TAM6 284 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 PUF60Q9UHX1 559 aaKnown RBP13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 IFIT1BQ5T764 474 aaKnown RBP13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 CHAMP1Q96JM3 812 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 TSPY3P0CV98 308 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 TSPY8P0CW00 308 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 XAGE2Q96GT9 111 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 SERPINA10Q9UK55 444 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 ADGRB2O60241 1585 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 GNAQP50148 359 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 RTN1Q16799 776 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 CCDC42Q96M95 316 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 RASSF4Q9H2L5 321 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 VAV2P52735 878 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 SMC6Q96SB8 1091 aa13.86□□□□□ -0.19
NPLOC4-202ENST00000374747 GSPT1P15170 499 aaKnown RBP13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 DHX32Q7L7V1 743 aaKnown RBP13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 INTS4Q96HW7 963 aaKnown RBP13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 SELENOSQ9BQE4 189 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 STX8Q9UNK0 236 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 LRRC7Q96NW7 1537 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 PHACTR2O75167 634 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 KRT13P13646 458 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 KARSQ15046 597 aaKnown RBP13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 ZNF569Q5MCW4 686 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 HDXQ7Z353 690 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 CPLX4Q7Z7G2 160 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 CCDC114Q96M63 670 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 SPATA31A3Q5VYP0 1347 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 LDHBP07195 334 aaKnown RBP13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 IRX3P78415 501 aaPredicted RBP13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 BRINP3Q76B58 766 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 DAAM2Q86T65 1068 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 LPIN2Q92539 896 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 ZNF594Q96JF6 807 aaPredicted RBP13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 MMRN2Q9H8L6 949 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 LZTFL1Q9NQ48 299 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 IFNKQ9P0W0 207 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 ZEB2O60315 1214 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 C10orf67Q8IYJ2 551 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 FAM76AQ8TAV0 307 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 CAPZA3Q96KX2 299 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 GUCA1BQ9UMX6 200 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 MROH5Q6ZUA9 1318 aa13.85□□□□□ -0.19
NPLOC4-202ENST00000374747 ATP2A1O14983 1001 aa13.84□□□□□ -0.19
NPLOC4-202ENST00000374747 RHOXF2BP0C7M4 288 aa13.84□□□□□ -0.19
NPLOC4-202ENST00000374747 GRIPAP1Q4V328 841 aa13.84□□□□□ -0.19
NPLOC4-202ENST00000374747 RUFY3Q7L099 469 aa13.84□□□□□ -0.19
NPLOC4-202ENST00000374747 USP37Q86T82 979 aa13.84□□□□□ -0.19
NPLOC4-202ENST00000374747 ERO1AQ96HE7 468 aa13.84□□□□□ -0.19
NPLOC4-202ENST00000374747 RHOXF2Q9BQY4 288 aa13.84□□□□□ -0.19
NPLOC4-202ENST00000374747 ASIC1P78348 528 aa13.84□□□□□ -0.19
NPLOC4-202ENST00000374747 OGFOD1Q8N543 542 aa13.84□□□□□ -0.19
NPLOC4-202ENST00000374747 ZC3H13Q5T200 1668 aaKnown RBP13.84□□□□□ -0.19
NPLOC4-202ENST00000374747 MED14O60244 1454 aa13.84□□□□□ -0.19
NPLOC4-202ENST00000374747 ZBTB16Q05516 673 aa13.84□□□□□ -0.19
NPLOC4-202ENST00000374747 AK2P54819 239 aa13.84□□□□□ -0.19
NPLOC4-202ENST00000374747 DHX58Q96C10 678 aa13.84□□□□□ -0.19
NPLOC4-202ENST00000374747 CALM1P0DP23 149 aa13.83□□□□□ -0.19
NPLOC4-202ENST00000374747 CALM2P0DP24 149 aa13.83□□□□□ -0.19
NPLOC4-202ENST00000374747 CALM3P0DP25 149 aa13.83□□□□□ -0.19
NPLOC4-202ENST00000374747 ARHGEF40Q8TER5 1519 aa13.83□□□□□ -0.19
NPLOC4-202ENST00000374747 CCDC160A6NGH7 325 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 TRIM75PA6NK02 468 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 IGSF3O75054 1194 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 STK32BQ9NY57 414 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 POLD1P28340 1107 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 KBTBD3Q8NAB2 608 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 MIGA1Q8NAN2 632 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 CEP83Q9Y592 693 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 PIK3C2BO00750 1634 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 MYO5BQ9ULV0 1848 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 HIBADHP31937 336 aaKnown RBP13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 SAMM50Q9Y512 469 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 RTL9Q8NET4 1388 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 SGSM2O43147 1006 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 PKP1Q13835 747 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 GBP6Q6ZN66 633 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 APPBP2Q92624 585 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 SAMD15Q9P1V8 674 aa13.83□□□□□ -0.2
NPLOC4-202ENST00000374747 F8W031 263 aaPredicted RBP13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 SLC4A8Q2Y0W8 1093 aa13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 TTLL7Q6ZT98 887 aa13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 DLC1Q96QB1 1528 aa13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 VIRMAQ69YN4 1812 aaKnown RBP13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 BICDL2A1A5D9 508 aa13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 UBXN1Q04323 297 aa13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 GTF3C6Q969F1 213 aa13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 DNAJC21Q5F1R6 531 aaKnown RBP13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 CNGA4Q8IV77 575 aa13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 RSRC1Q96IZ7 334 aaKnown RBP13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 MCM9Q9NXL9 1143 aa13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 PCCAP05165 728 aaPredicted RBP13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 EVCP57679 992 aa13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 TNNC1P63316 161 aa13.82□□□□□ -0.2
NPLOC4-202ENST00000374747 TRAF1Q13077 416 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms