RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 TMX1Q9H3N1 280 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 CHPF2Q9P2E5 772 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 FER1L6Q2WGJ9 1857 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 SMC2O95347 1197 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 GSCP56915 257 aaPredicted RBP16.49■□□□□ 0.23
A1CF-202ENST00000373993 MAP3K9P80192 1104 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 GIGYF2Q6Y7W6 1299 aaKnown RBP16.49■□□□□ 0.23
A1CF-202ENST00000373993 CCDC73Q6ZRK6 1079 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 COPS6Q7L5N1 327 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 LRP10Q7Z4F1 713 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 SECISBP2LQ93073 1101 aaKnown RBP16.49■□□□□ 0.23
A1CF-202ENST00000373993 NYXQ9GZU5 481 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 IL25Q9H293 177 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 HMG20BQ9P0W2 317 aa16.49■□□□□ 0.23
A1CF-202ENST00000373993 RGL2O15211 777 aa16.48■□□□□ 0.23
A1CF-202ENST00000373993 USP5P45974 858 aa16.48■□□□□ 0.23
A1CF-202ENST00000373993 RESTQ13127 1097 aa16.48■□□□□ 0.23
A1CF-202ENST00000373993 ARID5BQ14865 1188 aa16.48■□□□□ 0.23
A1CF-202ENST00000373993 SUSD4Q5VX71 490 aa16.48■□□□□ 0.23
A1CF-202ENST00000373993 EFCAB13Q8IY85 973 aa16.48■□□□□ 0.23
A1CF-202ENST00000373993 TRERF1Q96PN7 1200 aa16.48■□□□□ 0.23
A1CF-202ENST00000373993 LLPHQ9BRT6 129 aaKnown RBP16.48■□□□□ 0.23
A1CF-202ENST00000373993 CBFA2T2O43439 604 aa16.47■□□□□ 0.23
A1CF-202ENST00000373993 NPR1P16066 1061 aa16.47■□□□□ 0.23
A1CF-202ENST00000373993 EVCP57679 992 aa16.47■□□□□ 0.23
A1CF-202ENST00000373993 FAM160A1Q05DH4 1040 aa16.47■□□□□ 0.23
A1CF-202ENST00000373993 NAA16Q6N069 864 aaPredicted RBP16.47■□□□□ 0.23
A1CF-202ENST00000373993 OLFM4Q6UX06 510 aa16.47■□□□□ 0.23
A1CF-202ENST00000373993 C11orf57Q6ZUT1 292 aaPredicted RBP16.47■□□□□ 0.23
A1CF-202ENST00000373993 HOMER1Q86YM7 354 aa16.47■□□□□ 0.23
A1CF-202ENST00000373993 RNF216Q9NWF9 866 aaPredicted RBP16.47■□□□□ 0.23
A1CF-202ENST00000373993 KINO60870 393 aaKnown RBP16.47■□□□□ 0.23
A1CF-202ENST00000373993 ZRSR1Q15695 479 aaKnown RBP16.47■□□□□ 0.23
A1CF-202ENST00000373993 ENGASEQ8NFI3 743 aa16.47■□□□□ 0.23
A1CF-202ENST00000373993 STK31Q9BXU1 1019 aa16.47■□□□□ 0.23
A1CF-202ENST00000373993 TPCN1Q9ULQ1 816 aa16.47■□□□□ 0.23
A1CF-202ENST00000373993 ANKRD36CQ5JPF3 1778 aa16.47■□□□□ 0.23
A1CF-202ENST00000373993 PNMA6EA0A0J9YXQ4 647 aa16.46■□□□□ 0.23
A1CF-202ENST00000373993 IKBKBO14920 756 aa16.46■□□□□ 0.23
A1CF-202ENST00000373993 SASH3O75995 380 aa16.46■□□□□ 0.23
A1CF-202ENST00000373993 ZNF34Q8IZ26 560 aa16.46■□□□□ 0.23
A1CF-202ENST00000373993 RHPN1Q8TCX5 695 aa16.46■□□□□ 0.23
A1CF-202ENST00000373993 MAP4K1Q92918 833 aa16.46■□□□□ 0.23
A1CF-202ENST00000373993 ZNF396Q96N95 335 aaPredicted RBP16.46■□□□□ 0.23
A1CF-202ENST00000373993 TAOK3Q9H2K8 898 aa16.46■□□□□ 0.23
A1CF-202ENST00000373993 TRIM66O15016 1216 aa16.46■□□□□ 0.22
A1CF-202ENST00000373993 ERLIN1O75477 346 aa16.46■□□□□ 0.22
A1CF-202ENST00000373993 KRT32Q14532 448 aa16.46■□□□□ 0.22
A1CF-202ENST00000373993 ARMCX5Q6P1M9 558 aa16.46■□□□□ 0.22
A1CF-202ENST00000373993 MMS22LQ6ZRQ5 1243 aa16.46■□□□□ 0.22
A1CF-202ENST00000373993 HDXQ7Z353 690 aa16.46■□□□□ 0.22
A1CF-202ENST00000373993 GOLGA1Q92805 767 aa16.46■□□□□ 0.22
A1CF-202ENST00000373993 GBP3Q9H0R5 595 aa16.46■□□□□ 0.22
A1CF-202ENST00000373993 ACBD3Q9H3P7 528 aa16.46■□□□□ 0.22
A1CF-202ENST00000373993 RRAGCQ9HB90 399 aa16.46■□□□□ 0.22
A1CF-202ENST00000373993 DDX21Q9NR30 783 aaKnown RBP eCLIP16.46■□□□□ 0.22
A1CF-202ENST00000373993 HDAC5Q9UQL6 1122 aa16.46■□□□□ 0.22
A1CF-202ENST00000373993 MYH15Q9Y2K3 1946 aa16.45■□□□□ 0.22
A1CF-202ENST00000373993 A0A1W2PQ27 194 aa16.45■□□□□ 0.22
A1CF-202ENST00000373993 A0A1W2PQ64 194 aa16.45■□□□□ 0.22
A1CF-202ENST00000373993 A0A1W2PQD8 194 aa16.45■□□□□ 0.22
A1CF-202ENST00000373993 SRGAP3O43295 1099 aa16.45■□□□□ 0.22
A1CF-202ENST00000373993 TXLNAP40222 546 aa16.45■□□□□ 0.22
A1CF-202ENST00000373993 USP8P40818 1118 aa16.45■□□□□ 0.22
A1CF-202ENST00000373993 TSHZ3Q63HK5 1081 aa16.45■□□□□ 0.22
A1CF-202ENST00000373993 MCTP2Q6DN12 878 aa16.45■□□□□ 0.22
A1CF-202ENST00000373993 LCMT1Q9UIC8 334 aa16.45■□□□□ 0.22
A1CF-202ENST00000373993 A0A087WUV0 522 aaPredicted RBP16.44■□□□□ 0.22
A1CF-202ENST00000373993 NTSR2O95665 410 aa16.44■□□□□ 0.22
A1CF-202ENST00000373993 LMAN1P49257 510 aa16.44■□□□□ 0.22
A1CF-202ENST00000373993 CCDC30Q5VVM6 783 aa16.44■□□□□ 0.22
A1CF-202ENST00000373993 PPP1R42Q7Z4L9 355 aa16.44■□□□□ 0.22
A1CF-202ENST00000373993 CCAR1Q8IX12 1150 aaKnown RBP16.44■□□□□ 0.22
A1CF-202ENST00000373993 RPGRQ92834 1020 aaKnown RBP16.44■□□□□ 0.22
A1CF-202ENST00000373993 EVI5LQ96CN4 794 aa16.44■□□□□ 0.22
A1CF-202ENST00000373993 GPATCH3Q96I76 525 aa16.44■□□□□ 0.22
A1CF-202ENST00000373993 RAB21Q9UL25 225 aa16.44■□□□□ 0.22
A1CF-202ENST00000373993 DICER1Q9UPY3 1922 aaKnown RBP16.44■□□□□ 0.22
A1CF-202ENST00000373993 CCDC196A0A1B0GTZ2 297 aa16.44■□□□□ 0.22
A1CF-202ENST00000373993 KLRG2A4D1S0 409 aaPredicted RBP16.44■□□□□ 0.22
A1CF-202ENST00000373993 EIF3CLB5ME19 914 aaKnown RBP16.44■□□□□ 0.22
A1CF-202ENST00000373993 ARHGAP6O43182 974 aa16.44■□□□□ 0.22
A1CF-202ENST00000373993 BRD2P25440 801 aaKnown RBP16.44■□□□□ 0.22
A1CF-202ENST00000373993 APOBRQ0VD83 1088 aa16.44■□□□□ 0.22
A1CF-202ENST00000373993 BLOC1S2Q6QNY1 142 aa16.44■□□□□ 0.22
A1CF-202ENST00000373993 CEP120Q8N960 986 aa16.44■□□□□ 0.22
A1CF-202ENST00000373993 EIF3CQ99613 913 aaKnown RBP16.44■□□□□ 0.22
A1CF-202ENST00000373993 CARD6Q9BX69 1037 aa16.44■□□□□ 0.22
A1CF-202ENST00000373993 MED4Q9NPJ6 270 aa16.44■□□□□ 0.22
A1CF-202ENST00000373993 URI1O94763 535 aaPredicted RBP16.43■□□□□ 0.22
A1CF-202ENST00000373993 RPS6KB1P23443 525 aa16.43■□□□□ 0.22
A1CF-202ENST00000373993 LONRF2Q1L5Z9 754 aa16.43■□□□□ 0.22
A1CF-202ENST00000373993 CREB3L3Q68CJ9 461 aa16.43■□□□□ 0.22
A1CF-202ENST00000373993 TFIP11Q9UBB9 837 aaKnown RBP16.43■□□□□ 0.22
A1CF-202ENST00000373993 CHMP3Q9Y3E7 222 aa16.43■□□□□ 0.22
A1CF-202ENST00000373993 CEP83Q9Y592 693 aa16.43■□□□□ 0.22
A1CF-202ENST00000373993 MRFAP1Q9Y605 127 aa16.43■□□□□ 0.22
A1CF-202ENST00000373993 CCDC172P0C7W6 258 aa16.42■□□□□ 0.22
A1CF-202ENST00000373993 ALDH1B1P30837 517 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms