RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 SUCLG2Q96I99 432 aa26.82■■□□□ 1.88
RAPGEF1-203ENST00000372195 MAK16Q9BXY0 300 aaKnown RBP26.82■■□□□ 1.88
RAPGEF1-203ENST00000372195 AATFQ9NY61 560 aaKnown RBP eCLIP26.82■■□□□ 1.88
RAPGEF1-203ENST00000372195 RTCBQ9Y3I0 505 aaKnown RBP26.82■■□□□ 1.88
RAPGEF1-203ENST00000372195 WDR7Q9Y4E6 1490 aa26.82■■□□□ 1.88
RAPGEF1-203ENST00000372195 NDC80O14777 642 aa26.82■■□□□ 1.88
RAPGEF1-203ENST00000372195 CYP26C1Q6V0L0 522 aa26.82■■□□□ 1.88
RAPGEF1-203ENST00000372195 TTC14Q96N46 770 aa26.82■■□□□ 1.88
RAPGEF1-203ENST00000372195 EIF2AK4Q9P2K8 1649 aaKnown RBP26.82■■□□□ 1.88
RAPGEF1-203ENST00000372195 GPAA1O43292 621 aa26.82■■□□□ 1.88
RAPGEF1-203ENST00000372195 PROCA1Q8NCQ7 364 aaPredicted RBP26.82■■□□□ 1.88
RAPGEF1-203ENST00000372195 DDX23Q9BUQ8 820 aaKnown RBP26.82■■□□□ 1.88
RAPGEF1-203ENST00000372195 ITSN2Q9NZM3 1697 aa26.82■■□□□ 1.88
RAPGEF1-203ENST00000372195 TEX11Q8IYF3 940 aa26.81■■□□□ 1.88
RAPGEF1-203ENST00000372195 CLEC11AQ9Y240 323 aa26.81■■□□□ 1.88
RAPGEF1-203ENST00000372195 MAP3K19Q56UN5 1328 aa26.81■■□□□ 1.88
RAPGEF1-203ENST00000372195 AFAP1L1Q8TED9 768 aa26.81■■□□□ 1.88
RAPGEF1-203ENST00000372195 DEXIO95424 95 aa26.81■■□□□ 1.88
RAPGEF1-203ENST00000372195 BIRC3Q13489 604 aa26.81■■□□□ 1.88
RAPGEF1-203ENST00000372195 PPP1R21Q6ZMI0 780 aa26.81■■□□□ 1.88
RAPGEF1-203ENST00000372195 ERO1AQ96HE7 468 aa26.81■■□□□ 1.88
RAPGEF1-203ENST00000372195 ZNF202O95125 648 aa26.81■■□□□ 1.88
RAPGEF1-203ENST00000372195 GCP02774 474 aa26.81■■□□□ 1.88
RAPGEF1-203ENST00000372195 ERCC5P28715 1186 aaPredicted RBP26.81■■□□□ 1.88
RAPGEF1-203ENST00000372195 TFCP2L1Q9NZI6 479 aa26.81■■□□□ 1.88
RAPGEF1-203ENST00000372195 CCDC169A6NNP5 214 aa26.81■■□□□ 1.88
RAPGEF1-203ENST00000372195 RAB3IL1Q8TBN0 382 aa26.81■■□□□ 1.88
RAPGEF1-203ENST00000372195 MTX1Q13505 466 aa26.8■■□□□ 1.88
RAPGEF1-203ENST00000372195 AGTPBP1Q9UPW5 1226 aa26.8■■□□□ 1.88
RAPGEF1-203ENST00000372195 TNFAIP3P21580 790 aa26.8■■□□□ 1.88
RAPGEF1-203ENST00000372195 CALCOCO2Q13137 446 aa26.8■■□□□ 1.88
RAPGEF1-203ENST00000372195 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
RAPGEF1-203ENST00000372195 SPOPO43791 374 aa26.8■■□□□ 1.88
RAPGEF1-203ENST00000372195 CSGALNACT2Q8N6G5 542 aa26.8■■□□□ 1.88
RAPGEF1-203ENST00000372195 DCAF5Q96JK2 942 aa26.8■■□□□ 1.88
RAPGEF1-203ENST00000372195 ASIC2Q16515 512 aa26.8■■□□□ 1.88
RAPGEF1-203ENST00000372195 PIK3C2GO75747 1445 aa26.8■■□□□ 1.88
RAPGEF1-203ENST00000372195 PNOCQ13519 176 aa26.79■■□□□ 1.88
RAPGEF1-203ENST00000372195 NCAPH2Q6IBW4 605 aa26.79■■□□□ 1.88
RAPGEF1-203ENST00000372195 TRIM35Q9UPQ4 493 aa26.79■■□□□ 1.88
RAPGEF1-203ENST00000372195 UHRF1BP1LA0JNW5 1464 aa26.79■■□□□ 1.88
RAPGEF1-203ENST00000372195 RASA3Q14644 834 aa26.79■■□□□ 1.88
RAPGEF1-203ENST00000372195 TXNDC16Q9P2K2 825 aa26.79■■□□□ 1.88
RAPGEF1-203ENST00000372195 C8orf74Q6P047 294 aa26.79■■□□□ 1.88
RAPGEF1-203ENST00000372195 CMTR1Q8N1G2 835 aaKnown RBP26.79■■□□□ 1.88
RAPGEF1-203ENST00000372195 KAT6BQ8WYB5 2073 aa26.79■■□□□ 1.88
RAPGEF1-203ENST00000372195 EYA2O00167 538 aa26.78■■□□□ 1.88
RAPGEF1-203ENST00000372195 NLRP12P59046 1061 aa26.78■■□□□ 1.88
RAPGEF1-203ENST00000372195 DIS3L2Q8IYB7 885 aaKnown RBP26.78■■□□□ 1.88
RAPGEF1-203ENST00000372195 METTL22Q9BUU2 404 aaPredicted RBP26.78■■□□□ 1.88
RAPGEF1-203ENST00000372195 MTUS1Q9ULD2 1270 aa26.78■■□□□ 1.88
RAPGEF1-203ENST00000372195 NUP160Q12769 1436 aa26.78■■□□□ 1.88
RAPGEF1-203ENST00000372195 KLHL7Q8IXQ5 586 aa26.78■■□□□ 1.88
RAPGEF1-203ENST00000372195 RASSF4Q9H2L5 321 aa26.78■■□□□ 1.88
RAPGEF1-203ENST00000372195 FAM169AQ9Y6X4 670 aa26.78■■□□□ 1.88
RAPGEF1-203ENST00000372195 PAK1Q13153 545 aa26.78■■□□□ 1.88
RAPGEF1-203ENST00000372195 KDM2BQ8NHM5 1336 aa26.78■■□□□ 1.88
RAPGEF1-203ENST00000372195 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.78■■□□□ 1.88
RAPGEF1-203ENST00000372195 TSC1Q92574 1164 aa26.78■■□□□ 1.88
RAPGEF1-203ENST00000372195 EDC3Q96F86 508 aaKnown RBP26.78■■□□□ 1.88
RAPGEF1-203ENST00000372195 GNPATO15228 680 aa26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 PLCG2P16885 1265 aa26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 DENND2AQ9ULE3 1009 aa26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 CEP83Q9Y592 693 aa26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 NAA25Q14CX7 972 aa26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 RILPL1Q5EBL4 403 aa26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 TTC38Q5R3I4 469 aa26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 ANKRD2Q9GZV1 360 aa26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 PLCD1P51178 756 aa26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 MAP3K9P80192 1104 aa26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 TRAF1Q13077 416 aa26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 GDAP1L1Q96MZ0 367 aa26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 A2MP01023 1474 aa26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 MAP7D1Q3KQU3 841 aa26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 DDX21Q9NR30 783 aaKnown RBP eCLIP26.77■■□□□ 1.88
RAPGEF1-203ENST00000372195 CFAP157Q5JU67 520 aa26.76■■□□□ 1.87
RAPGEF1-203ENST00000372195 CCDC26Q8TAB7 109 aa26.76■■□□□ 1.87
RAPGEF1-203ENST00000372195 LRRC45Q96CN5 670 aa26.76■■□□□ 1.87
RAPGEF1-203ENST00000372195 LMBRD1Q9NUN5 540 aa26.76■■□□□ 1.87
RAPGEF1-203ENST00000372195 UFL1O94874 794 aa26.76■■□□□ 1.87
RAPGEF1-203ENST00000372195 NELFCDQ8IXH7 590 aa26.76■■□□□ 1.87
RAPGEF1-203ENST00000372195 FNBP4Q8N3X1 1017 aaPredicted RBP26.76■■□□□ 1.87
RAPGEF1-203ENST00000372195 RPL13P26373 211 aaKnown RBP26.76■■□□□ 1.87
RAPGEF1-203ENST00000372195 ZNF790Q6PG37 636 aa26.76■■□□□ 1.87
RAPGEF1-203ENST00000372195 ANGEL1Q9UNK9 670 aaKnown RBP26.76■■□□□ 1.87
RAPGEF1-203ENST00000372195 PARP3Q9Y6F1 533 aa26.76■■□□□ 1.87
RAPGEF1-203ENST00000372195 SGSM2O43147 1006 aa26.76■■□□□ 1.87
RAPGEF1-203ENST00000372195 A1BGP04217 495 aa26.76■■□□□ 1.87
RAPGEF1-203ENST00000372195 USH1GQ495M9 461 aa26.76■■□□□ 1.87
RAPGEF1-203ENST00000372195 CNNM4Q6P4Q7 775 aa26.75■■□□□ 1.87
RAPGEF1-203ENST00000372195 DAAM2Q86T65 1068 aa26.75■■□□□ 1.87
RAPGEF1-203ENST00000372195 ZFYVE9O95405 1425 aa26.75■■□□□ 1.87
RAPGEF1-203ENST00000372195 SETDB1Q15047 1291 aa26.75■■□□□ 1.87
RAPGEF1-203ENST00000372195 PUM3Q15397 648 aaKnown RBP26.75■■□□□ 1.87
RAPGEF1-203ENST00000372195 PLBD2Q8NHP8 589 aa26.75■■□□□ 1.87
RAPGEF1-203ENST00000372195 IL13P35225 146 aa26.75■■□□□ 1.87
RAPGEF1-203ENST00000372195 IRX3P78415 501 aaPredicted RBP26.75■■□□□ 1.87
RAPGEF1-203ENST00000372195 FNBP1Q96RU3 617 aa26.75■■□□□ 1.87
RAPGEF1-203ENST00000372195 SLF1Q9BQI6 1058 aa26.75■■□□□ 1.87
RAPGEF1-203ENST00000372195 GBP6Q6ZN66 633 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms