RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 FAM163AQ96GL9 167 aaPredicted RBP18.63■□□□□ 0.57
SS18L1-202ENST00000370848 IDI2Q9BXS1 227 aa18.63■□□□□ 0.57
SS18L1-202ENST00000370848 FAM198AQ9UFP1 575 aa18.63■□□□□ 0.57
SS18L1-202ENST00000370848 MYH2Q9UKX2 1941 aa18.62■□□□□ 0.57
SS18L1-202ENST00000370848 HMMRO75330 724 aa18.62■□□□□ 0.57
SS18L1-202ENST00000370848 LDHBP07195 334 aaKnown RBP18.62■□□□□ 0.57
SS18L1-202ENST00000370848 MAP3K10Q02779 954 aa18.62■□□□□ 0.57
SS18L1-202ENST00000370848 ARHGEF6Q15052 776 aa18.62■□□□□ 0.57
SS18L1-202ENST00000370848 EAF2Q96CJ1 260 aaPredicted RBP18.62■□□□□ 0.57
SS18L1-202ENST00000370848 CCDC8Q9H0W5 538 aaPredicted RBP18.62■□□□□ 0.57
SS18L1-202ENST00000370848 IL1RAPL2Q9NP60 686 aa18.62■□□□□ 0.57
SS18L1-202ENST00000370848 GPR108Q9NPR9 543 aa18.62■□□□□ 0.57
SS18L1-202ENST00000370848 ADGRA2Q96PE1 1338 aa18.62■□□□□ 0.57
SS18L1-202ENST00000370848 KIAA0100Q14667 2235 aaKnown RBP18.61■□□□□ 0.57
SS18L1-202ENST00000370848 BTBD19C9JJ37 291 aa18.61■□□□□ 0.57
SS18L1-202ENST00000370848 GNRH1P01148 92 aa18.61■□□□□ 0.57
SS18L1-202ENST00000370848 NFIAQ12857 509 aa18.61■□□□□ 0.57
SS18L1-202ENST00000370848 GORABQ5T7V8 394 aa18.61■□□□□ 0.57
SS18L1-202ENST00000370848 ZGPATQ8N5A5 531 aaKnown RBP18.61■□□□□ 0.57
SS18L1-202ENST00000370848 RHPN1Q8TCX5 695 aa18.61■□□□□ 0.57
SS18L1-202ENST00000370848 ZNF333Q96JL9 665 aa18.61■□□□□ 0.57
SS18L1-202ENST00000370848 DBNLQ9UJU6 430 aaKnown RBP18.61■□□□□ 0.57
SS18L1-202ENST00000370848 PCDHB15Q9Y5E8 787 aa18.61■□□□□ 0.57
SS18L1-202ENST00000370848 ENTPD3O75355 529 aa18.6■□□□□ 0.57
SS18L1-202ENST00000370848 INPP5BP32019 993 aa18.6■□□□□ 0.57
SS18L1-202ENST00000370848 MOGSQ13724 837 aa18.6■□□□□ 0.57
SS18L1-202ENST00000370848 ANKRD23Q86SG2 305 aa18.6■□□□□ 0.57
SS18L1-202ENST00000370848 BCL11AQ9H165 835 aa18.6■□□□□ 0.57
SS18L1-202ENST00000370848 SUPT16HQ9Y5B9 1047 aaKnown RBP18.6■□□□□ 0.57
SS18L1-202ENST00000370848 ZSWIM8A7E2V4 1837 aa18.6■□□□□ 0.57
SS18L1-202ENST00000370848 COL2A1P02458 1487 aaPredicted RBP18.59■□□□□ 0.57
SS18L1-202ENST00000370848 POTEFA5A3E0 1075 aa18.59■□□□□ 0.57
SS18L1-202ENST00000370848 ARID4AP29374 1257 aaPredicted RBP18.59■□□□□ 0.57
SS18L1-202ENST00000370848 ERC1Q8IUD2 1116 aa18.59■□□□□ 0.57
SS18L1-202ENST00000370848 HMG20BQ9P0W2 317 aa18.59■□□□□ 0.57
SS18L1-202ENST00000370848 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.59■□□□□ 0.57
SS18L1-202ENST00000370848 PTPRFP10586 1907 aa18.59■□□□□ 0.57
SS18L1-202ENST00000370848 NPM3O75607 178 aaKnown RBP18.58■□□□□ 0.56
SS18L1-202ENST00000370848 WDHD1O75717 1129 aaPredicted RBP18.58■□□□□ 0.56
SS18L1-202ENST00000370848 MCAMP43121 646 aa18.58■□□□□ 0.56
SS18L1-202ENST00000370848 LACTBP83111 547 aaPredicted RBP18.58■□□□□ 0.56
SS18L1-202ENST00000370848 C17orf99Q6UX52 265 aa18.58■□□□□ 0.56
SS18L1-202ENST00000370848 AACSQ86V21 672 aa18.58■□□□□ 0.56
SS18L1-202ENST00000370848 PHIPQ8WWQ0 1821 aa18.58■□□□□ 0.56
SS18L1-202ENST00000370848 DOCK1Q14185 1865 aa18.57■□□□□ 0.56
SS18L1-202ENST00000370848 PHF20L1A8MW92 1017 aa18.57■□□□□ 0.56
SS18L1-202ENST00000370848 PRMT2P55345 433 aa18.57■□□□□ 0.56
SS18L1-202ENST00000370848 HSP90AB4PQ58FF6 505 aa18.57■□□□□ 0.56
SS18L1-202ENST00000370848 TTC39AQ5SRH9 613 aa18.57■□□□□ 0.56
SS18L1-202ENST00000370848 MIGA2Q7L4E1 593 aa18.57■□□□□ 0.56
SS18L1-202ENST00000370848 SNRKQ9NRH2 765 aa18.57■□□□□ 0.56
SS18L1-202ENST00000370848 CXCL11O14625 94 aa18.56■□□□□ 0.56
SS18L1-202ENST00000370848 TBC1D9Q6ZT07 1266 aa18.56■□□□□ 0.56
SS18L1-202ENST00000370848 SPATA5Q8NB90 893 aa18.56■□□□□ 0.56
SS18L1-202ENST00000370848 KIF1BPQ96EK5 621 aa18.56■□□□□ 0.56
SS18L1-202ENST00000370848 USP40Q9NVE5 1235 aa18.56■□□□□ 0.56
SS18L1-202ENST00000370848 ABCF2Q9UG63 623 aa18.56■□□□□ 0.56
SS18L1-202ENST00000370848 PTCH2Q9Y6C5 1203 aa18.56■□□□□ 0.56
SS18L1-202ENST00000370848 AK9Q5TCS8 1911 aa18.55■□□□□ 0.56
SS18L1-202ENST00000370848 SMARCA5O60264 1052 aaPredicted RBP18.55■□□□□ 0.56
SS18L1-202ENST00000370848 MAP4K4O95819 1239 aaPredicted RBP18.55■□□□□ 0.56
SS18L1-202ENST00000370848 TCP10Q12799 353 aa18.55■□□□□ 0.56
SS18L1-202ENST00000370848 SH3BP5LQ7L8J4 393 aa18.55■□□□□ 0.56
SS18L1-202ENST00000370848 ZFPM1Q8IX07 1006 aa18.55■□□□□ 0.56
SS18L1-202ENST00000370848 SLF2Q8IX21 1173 aa18.55■□□□□ 0.56
SS18L1-202ENST00000370848 ZNF384Q8TF68 577 aa18.55■□□□□ 0.56
SS18L1-202ENST00000370848 PCDH10Q9P2E7 1040 aa18.55■□□□□ 0.56
SS18L1-202ENST00000370848 MROH7-TTC4A0A0A0MT08 1334 aa18.54■□□□□ 0.56
SS18L1-202ENST00000370848 GPR75-ASB3A0A0A6YYF3 556 aa18.54■□□□□ 0.56
SS18L1-202ENST00000370848 RAB11FIP3O75154 756 aa18.54■□□□□ 0.56
SS18L1-202ENST00000370848 UQCRFS1P1P0C7P4 283 aa18.54■□□□□ 0.56
SS18L1-202ENST00000370848 RGS3P49796 1198 aa18.54■□□□□ 0.56
SS18L1-202ENST00000370848 CCDC158Q5M9N0 1113 aa18.54■□□□□ 0.56
SS18L1-202ENST00000370848 SPTY2D1Q68D10 685 aaPredicted RBP18.54■□□□□ 0.56
SS18L1-202ENST00000370848 EXOC6Q8TAG9 804 aa18.54■□□□□ 0.56
SS18L1-202ENST00000370848 NDUFB9Q9Y6M9 179 aa18.54■□□□□ 0.56
SS18L1-202ENST00000370848 MAST2Q6P0Q8 1798 aa18.54■□□□□ 0.56
SS18L1-202ENST00000370848 RHBDL3P58872 404 aa18.53■□□□□ 0.56
SS18L1-202ENST00000370848 IRX6P78412 446 aaPredicted RBP18.53■□□□□ 0.56
SS18L1-202ENST00000370848 SLC9C1Q4G0N8 1177 aa18.53■□□□□ 0.56
SS18L1-202ENST00000370848 GPAT2Q6NUI2 795 aa18.53■□□□□ 0.56
SS18L1-202ENST00000370848 NBPF11Q86T75 865 aa18.53■□□□□ 0.56
SS18L1-202ENST00000370848 SCYL3Q8IZE3 742 aa18.53■□□□□ 0.56
SS18L1-202ENST00000370848 SLC45A1Q9Y2W3 748 aa18.53■□□□□ 0.56
SS18L1-202ENST00000370848 A0A0G2JLL6 359 aaPredicted RBP18.52■□□□□ 0.56
SS18L1-202ENST00000370848 PDHXO00330 501 aa18.52■□□□□ 0.56
SS18L1-202ENST00000370848 TBC1D12O60347 775 aa18.52■□□□□ 0.56
SS18L1-202ENST00000370848 BCRP11274 1271 aa18.52■□□□□ 0.56
SS18L1-202ENST00000370848 CTGFP29279 349 aa18.52■□□□□ 0.56
SS18L1-202ENST00000370848 ZAP70P43403 619 aa18.52■□□□□ 0.56
SS18L1-202ENST00000370848 KIF22Q14807 665 aa18.52■□□□□ 0.56
SS18L1-202ENST00000370848 PRRT2Q7Z6L0 340 aaPredicted RBP18.52■□□□□ 0.56
SS18L1-202ENST00000370848 DZIP1Q86YF9 867 aaKnown RBP18.52■□□□□ 0.56
SS18L1-202ENST00000370848 CLASRPQ8N2M8 674 aaKnown RBP18.52■□□□□ 0.56
SS18L1-202ENST00000370848 ARHGAP39Q9C0H5 1083 aa18.52■□□□□ 0.56
SS18L1-202ENST00000370848 DCTPP1Q9H773 170 aa18.52■□□□□ 0.56
SS18L1-202ENST00000370848 DDX4Q9NQI0 724 aaKnown RBP18.52■□□□□ 0.56
SS18L1-202ENST00000370848 MGAMO43451 1857 aa18.52■□□□□ 0.55
SS18L1-202ENST00000370848 LOC285556D6RIA3 1793 aa18.51■□□□□ 0.55
SS18L1-202ENST00000370848 IGSF3O75054 1194 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms